Oryzias melastigma (Indian medaka): 112154534
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Entry
112154534 CDS
T07439
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112154534 (tdrd1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112154534 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
zf-HIT
MYND_ZMYND11_ZMYD8
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
112154534
NCBI-ProteinID:
XP_024141314
Ensembl:
ENSOMEG00000023637
LinkDB
All DBs
Position
LG19:6352139..6373272
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AA seq
1184 aa
AA seq
DB search
MASPSFTEAARAVTTADMNPLFMPNLVRPNRPLREPASRPGTPSPLRFPPPHIPDAAHVD
SAAKSIGVGLPKPANINDTTSHGLVPPALTVHFCHFCGQKGNFRCKRCKKTSYCSADCQT
KDWKAHRHVCKSFEPETAGESLKENPVLQSTANSANIKEPQDSLNIKRVYLKDLNTTKYM
KGAEMQGVVVEFHSPGRFFIHPEDPMMAEALMSITVELQKTPNVSTGTPYVPCVGEVCSV
QFSCDLSWYRGLIQTLAADQKAAHVLYIDYGNEENVPVERIKPLSVDAKPFCPCAMECQI
AGVVPVADSWSSECCMAARQLLSGKVLTIKLVDTLKNGYVHSVDIQLSAGKQLSTFLLEQ
EYALAEADGSAPAEKDKGALLKASVENFQRCSDGKDNNDWAQLPEPLTQAVGDRFSVVVS
HFQSPNDFIVQKVENGGVIQDLQLKLREHCSRVETPQNFRPAPGTVCCAQFSEDKQWYRA
QVLAYSSEKSVCVGYLDFGNSEEVDLNRLRPISPALLAFPMQAIPCSLGGVQPVGDSWSE
ECISALLRIISNKMVHIEIQSALKGKALVKIIEGEGDSQINVAELLISVNYAIPVESGTP
QQTKETTASAEPPASPPVSDPLVWSCAELPSDGQTVALLASVVKSPAEFYCCVNNSNDYQ
ELVELGVQLKQHCESNSSSFTPTVGEPCCVQFTGDGKWYRAMVKELFGDVVNVNLVDFGQ
NMTVNSGCIRSITPKLLKLPFQAVRCWLTGVEPSGSEWKSEALTWFQNLVDGVQLLARVV
SVSEQGYGVELESGGQSVAVALVAQGFAKNSGDSLNDPVTSSNTKPEDLGEEKQNQTGPQ
PNDETRDVCEETKSEEESQKPSEVAAFSVDWKTSQLPLNETFQPCVAAVINPSLFYLLHP
IQVDPQNLQEVMLELALHCNTDQNSVTSRPVPGAACCARFSVDDNWYRAVILEVGEAEMS
VIYADYGNSEKVPVSRILPIPTHLLELPFQITRCALTGSEHFPAEWPPQVQQMFHTELSN
DVTATVQSFDGSANVLSVSLSSERGGWNLAAMIQEMLHVNRTSRPLPDAAQGGEQPCSGV
SHAAEPDRIPSTPQNELEESPEPVNADGCMETRESAPRKEKEMDLDTPVHGDPVEEVEQR
KSSTEDEAGAGDLQSSGCCCQSLKKQMDRLEEMIQLLLSLQAKE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccttcttttacagaagcagcacgtgcagtcacaactgccgacatgaacccg
ctatttatgccgaacttggttcgacccaaccggcctttgagagaacccgcatcgaggccc
gggactccatctccattaaggtttccccctcctcacatccccgatgccgcacatgtagac
tctgcagcaaagtccattggagttggccttcctaaaccagccaacataaatgacactaca
tctcatggattggtcccgcctgcactgacggtacacttttgccatttttgtggccaaaaa
gggaattttcggtgcaaacgctgcaagaaaacctcctactgctccgcggattgtcagacc
aaagactggaaggcccaccggcatgtgtgcaagagttttgagccagagactgcaggagaa
agcctaaaagaaaatccagttttgcagtcaacagcaaattcagctaatatcaaggagcct
caggactcgctcaacattaagagagtctatttgaaagacctgaataccactaaatacatg
aaaggagcagaaatgcagggtgttgttgttgagttccacagtcctggaaggttcttcatt
catcctgaagaccccatgatggcagaagctctaatgagcatcacagtggaactccaaaaa
acccccaacgtctccacagggacaccttacgtaccgtgtgtcggagaagtttgctcagtc
cagttctcctgcgatttgagttggtaccgaggtctcattcagactttggctgcagatcaa
aaggcggctcatgttctctacatcgattatggaaatgaggaaaatgtcccggtggagagg
atcaaacctctgagtgtcgacgctaaacccttctgcccctgtgcgatggagtgtcagatt
gccggtgttgtgccagtagctgacagttggtccagtgagtgctgcatggctgcgagacaa
ctgctgagcggcaaagtcctgaccatcaagctggtggacactctgaagaacggctatgtt
cattctgtggacatccagctttctgcagggaagcagctgagcacattcctcctcgagcag
gaatatgctcttgcagaagctgacggttctgcaccagcagagaaagacaaaggtgctcta
ctgaaagcatcagtggagaacttccagcgatgctctgatgggaaagacaacaatgattgg
gctcagctgccagagccgctcacacaggctgttggagaccgcttctctgtggtggtcagc
catttccagtcccccaacgacttcattgtgcaaaaggtggaaaacggcggagtgatccag
gacctgcagctgaagctgagggagcactgctctcgggtggaaaccccgcagaacttcaga
ccagctcctggaaccgtttgttgcgctcagttctcagaggacaagcagtggtaccgagca
caagttctggcttattcctctgagaaaagcgtctgtgttggatacctcgactttggtaat
tctgaggaggtggacttgaaccgcttgagacccatcagccccgctctgctggcttttcct
atgcaggcaattccctgtagccttggaggagtccagcctgttggggacagctggtcagag
gaatgcatctccgctttactgcggataatatcaaacaaaatggtgcacatcgagatccag
agtgcgcttaagggaaaggcgctggtgaagattatcgaaggagaaggcgactctcaaatc
aacgtggctgaactgttgatttctgtaaactacgccattcctgttgagtccggcactcct
caacagacgaaggagacgacggcttctgcagaaccgcccgcctctcctcctgtgagtgat
cctctggtttggtcttgtgctgagcttccctctgacggccagacggtggcgctgctcgcc
agtgttgtgaagagccctgcagagttttactgctgtgtcaacaatagcaatgattatcag
gagctggtggagcttggagttcagctgaagcagcattgtgagtctaactcctcgtccttc
acgccgacggtcggagagccctgctgcgtccagtttacaggtgatgggaaatggtaccga
gccatggtgaaggagctgtttggagatgtggtgaacgtcaacctggtggactttggtcag
aacatgacggtaaacagtggctgcattcgctccattacacccaaactcctgaaacttcct
tttcaagccgttcgctgctggctcacaggtgtggagccctcaggatccgagtggaagagt
gaagccctgacctggttccagaacctggtggacggcgtgcagcttttagctcgagtcgtc
tccgtgtccgagcagggatacggcgtggagctggagagcggaggacagagcgtagcagtc
gctctagtcgctcagggttttgccaaaaactctggagactctttgaacgatccagtaacg
agctccaacaccaaaccagaggatttaggggaggagaagcagaaccagacgggtccccaa
ccaaatgatgagacacgagacgtttgtgaggaaacaaaaagtgaagaggagtcacaaaaa
ccttcagaggttgcagctttctctgtggactggaagacgtctcaactacctctgaacgag
acctttcagccgtgcgtcgccgccgtcatcaatccctccctgttctacctgcttcatccc
atccaagtggatccacagaatcttcaggaggtgatgttggagctggctcttcactgcaac
accgatcagaactctgtgaccagcagaccggttcctggagccgcctgctgtgcccgattc
tccgtggatgataactggtaccgtgcagtcatcctggaagttggtgaagctgagatgagc
gttatctacgccgactacgggaactctgaaaaagttccggtctccagaatcttgccgatc
cccacgcatctgttagagcttccctttcagatcactcgctgcgctctcactggaagtgag
cattttccagcagaatggcctcctcaagtgcagcagatgtttcacactgaactgtccaac
gacgtcacggccaccgtccagtccttcgacggctccgcgaacgtgctctccgtgtcgctg
tcctctgagaggggcgggtggaaccttgctgccatgatccaggagatgctgcacgtcaat
agaacgagccgtcctcttccagacgccgctcagggaggggagcagccatgcagcggggtg
agccatgcagcagaaccggaccgcatcccatcgacaccccaaaacgagctggaagagtcc
cccgagcccgtgaacgctgatggatgcatggaaacccgggagtcggcaccgcgtaaggag
aaggaaatggatctggatacacctgtgcatggagatccagttgaggaagtggagcagagg
aagtcgtctactgaagatgaagccggcgccggcgatctccagagctccggctgctgctgt
cagagcctgaagaagcagatggacagactggaggagatgattcagctgctgttaagtctt
caggcaaaggaatga
DBGET
integrated database retrieval system
