Oryzias melastigma (Indian medaka): 112154542
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Entry
112154542 CDS
T07439
Name
(RefSeq) myosin-binding protein C, fast-type isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112154542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112154542
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112154542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
V-set
FN3_DSCAM-DSCAML_C
C1-set
Ig_4
Motif
Other DBs
NCBI-GeneID:
112154542
NCBI-ProteinID:
XP_024141323
Ensembl:
ENSOMEG00000018161
LinkDB
All DBs
Position
LG19:9136248..9157764
Genome browser
AA seq
1157 aa
AA seq
DB search
MPEPVPEVKPEGEDAPPADGDAPPADGDSDDGGDEPQSTELTGLFVEKPPSNVVAVAGSD
VTVVAKVDSTTLTRKPTMKWLKGKWMDLGSKAGKHFQFKETYDRNTKIYTYEMKIVKAVP
GDAGGYRCEVTAKDKCDSSTFEVSVEAAHQEEQADILSAFKRADAGEDEGELDFSALLKA
TKKKKKAEKQEPEIDVWELLKSAHPSEYEKIAFKYGITDLRGMLKRLKKMKEQPVKHSEA
FLKRLESCYTVDKGKKIVMSCEVLDPNAQVKWLKNGQEIKPSAKYVMEANGNVRTLTINK
TNLADDAAYECVVGEDKCSTEVYVKEPPVTITKLMDDYHVVVGERVEFEIEVSEEGAHVM
WCFEDQELHKDKESSKYRFKKDGKKHTFIILEATLDDIGMYHAWTNGGHTKGELEVEEKE
LEVLQDIADLTVRATEQAMFKCEVSDDKVTGKWYKDGVEVLPSERIKMTHIGRFHRLLIE
DVKPEDAGDYTFVPDGYALSLSAKLNFLEIKIDYVPRQDPPKIHLDTTGNMVSQNTIIVV
AGNKLRLDVEITGEPAPTVVWSKGDKPITETEGRVRVESRKDLSCFVIEGAERDDEGNYS
ICVTNPAGEDKAMLLVKIVDVPDPPENVKCTGVGEDCATIIWEPPKFDGGAPIKGYLMER
KKKGSSRWTKLNFDVYESTTYEAKRMIEGVLYEMRVFAVNSIGMSQPSLNSKPFMPIAPT
SEPTRLTVHDVTDSTCSLKWLAPEKIGAGGLDGYIIEYCKEGGNNNRFLYLMSKYTILIK
RDNQSLLFFSGTDWVQANTDICERQGFVVRDLPVGEKINFRVIAVNIAGRSPPATLAQPV
TIREIVEHPKIRLPRELRTKYIRRVGEKINLTIPFQGKPRPVATWYKDGKPIDPKMVNAH
TSHVESILFIRSAERDHSGTYELVLQIENMEDRATINIRIIEKPGPPQKVRVTDVWGFNA
ALEWDPPKDDGNSEITGYCIQKADMKTKEWFTVYDHNRRTNCTVSDLVMGNEYSFRVYSE
NLCGLSEDPGLSKNTAVISKSALEHKRNPYKEKDMTCAPKFTQPLVDRTVVAGYSMAISC
AVRGFPKPKIVWMKNKMIIGEDPKYLMQNNQGVLTLNIRKPSTFDGGKYSCMAVNELGKD
EVECKLDVKVAADPEKQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagccggtccctgaagtaaaaccagagggggaggatgcccccccagcagatgga
gatgcccccccagcagatggagattcagacgatggtggggatgagccccagtcgactgag
ctcactggactctttgtggagaaaccaccaagcaacgtagtggcagtagccggatcggac
gtgactgttgttgccaaggtggactcaaccaccctgacaagaaaacccaccatgaagtgg
ctgaagggaaagtggatggaccttggcagcaaagctgggaagcatttccagttcaaggaa
acttacgacagaaatactaaaatctacacttacgaaatgaagatcgtcaaagcagtccca
ggggacgctggcggctacaggtgtgaggtgacagctaaagacaaatgcgacagctccact
tttgaggtttctgtggaggctgcacaccaggaggagcaagcagatattttgtctgctttc
aagagagcggatgctggagaggatgagggagaacttgacttcagtgccctactgaaagcc
accaagaaaaagaagaaagctgaaaaacaggaaccagagatagatgtgtgggaattgctt
aaaagtgcccacccaagcgagtatgagaaaattgcctttaagtatggcatcactgacctg
aggggcatgctgaagcgtctgaaaaagatgaaagaacagccagtaaagcacagtgaggct
tttctgaaaaggcttgaatcttgctacactgtggacaaagggaagaaaattgtcatgtct
tgtgaagttcttgatccaaacgcccaggtcaaatggttgaagaacggccaggagatcaaa
ccttcagccaagtacgtcatggaggccaacgggaacgtccgaactctgaccatcaacaaa
accaatctggctgacgacgcggcgtacgagtgtgtggtcggggaggacaagtgctccacg
gaagtttatgtcaaagagcctccagtcaccatcaccaagctgatggatgattaccatgtg
gttgtgggcgaaagagtggagtttgagattgaagtgtcagaggaaggtgcacatgtcatg
tggtgctttgaggatcaagaactccacaaagacaaagagtcctccaagtaccgcttcaaa
aaggatggaaagaagcacacttttataattctagaggctaccctggatgacattggcatg
taccatgcctggacaaacgggggtcacaccaaaggagagctggaggtggaagaaaaggag
ctggaagtgttgcaggacatcgccgatttaacagtcagagcaacagaacaggcaatgttc
aagtgtgaagtgtctgatgacaaggtcaccggaaagtggtacaaagacggcgtggaggtc
ctaccaagcgaacgcatcaaaatgactcacattggaaggttccaccggctgttaattgaa
gatgtgaagccagaggatgctggagactacacatttgttcctgatggatatgctctgtca
ctttctgctaaactgaacttcttggaaatcaagattgattatgtgcccagacaagatccc
ccaaagatccacctggacaccacgggaaacatggtctcccagaataccattattgtggtg
gcgggcaacaaattacgcctggatgtcgagatcacaggagaaccagctcccactgtggtt
tggtctaaaggagataaaccaatcacagagactgaaggccgtgtgagggtagagtcccgg
aaggaccttagctgctttgtcattgagggggcagaaagagatgatgagggcaactatagt
atctgtgtcaccaaccccgctggagaggacaaggctatgctgttggtgaaaattgtggat
gtgcctgatccccctgagaatgttaaatgcactggagtgggagaggactgtgccactatt
atttgggagcctcccaaatttgatgggggagcgccaatcaaaggttatctcatggaaagg
aagaagaaaggctcctccagatggacaaaactgaactttgatgtgtatgagtcaaccaca
tacgaggccaaaaggatgattgaaggagttttgtacgagatgagagtgtttgccgttaac
agcatcggcatgtctcagccaagtctgaactccaagcccttcatgcccatcgcaccaact
agcgagccaactcgcctgaccgtccacgatgtgacagacagcacatgcagcttgaagtgg
ctcgccccagagaagatcggagctggaggtctggatggctacatcattgagtactgcaag
gagggaggtaacaacaaccggttcttatacttgatgagtaaatacacaatattgattaaa
agagataatcaaagtcttctgtttttctcaggcacggactgggttcaagctaacacagat
atttgtgagcggcagggatttgtggtgcgtgaccttccagtgggggagaaaatcaacttc
agagtgatagcggtgaacattgccggtcgcagtccacccgcgaccttggcgcagccagtc
accatccgagaaattgttgaacatccaaagattcgccttcctcgcgagctaagaacaaaa
tacatcaggagagtgggagaaaagatcaacctgaccatcccattccagggtaagcctcga
cctgttgccacctggtacaaggatggtaaacccattgacccaaagatggtcaatgcccac
acctcacatgtggaaagcatcctcttcattcgctcggcggagagagatcactctggaacg
tatgagctggtgttacagattgagaacatggaagacagagcaactattaatattcggatt
attgagaagccagggccaccccaaaaagtgagagttactgacgtttggggctttaacgct
gctctggagtgggacccacccaaagatgacggcaacagtgagattactggatactgtatc
cagaaagcagatatgaagaccaaggaatggttcaccgtttatgaccataacagacggaca
aactgcacagtttcagacctggtaatgggcaatgaatattcattccgcgtctacagtgaa
aacctttgtggtttaagtgaggatcctggcctcagcaagaacacagctgttatttctaaa
tcagccctcgagcacaaaagaaacccttacaaggagaaggacatgacctgtgcgcccaag
tttactcaaccgctggtggacagaacggttgttgctggttacagtatggccatcagctgt
gctgtgagaggcttccctaagcctaagattgtgtggatgaagaacaaaatgatcattgga
gaggatcccaagtatttgatgcagaacaaccagggagtgctgaccctcaacattcggaag
ccaagcaccttcgacggaggcaaatactcctgcatggctgtcaacgagttgggcaaggat
gaagtggagtgcaagctggatgtgaaagttgccgcagacccagagaagcaatga
DBGET
integrated database retrieval system
