Oryzias melastigma (Indian medaka): 112154574
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Entry
112154574 CDS
T07439
Symbol
pax2b
Name
(RefSeq) paired box protein Pax-2b isoform X1
KO
K15608
paired box protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112154574 (pax2b)
04131 Membrane trafficking [BR:
oml04131
]
112154574 (pax2b)
03036 Chromosome and associated proteins [BR:
oml03036
]
112154574 (pax2b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112154574 (pax2b)
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112154574 (pax2b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112154574 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
Homeodomain
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
HTH_SB
Motif
Other DBs
NCBI-GeneID:
112154574
NCBI-ProteinID:
XP_024141388
Ensembl:
ENSOMEG00000011620
LinkDB
All DBs
Position
LG19:complement(11925137..11954684)
Genome browser
AA seq
410 aa
AA seq
DB search
MDIHCKADPFTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRWVKIPRPRYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWE
IRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSTPGHTIVPSTASPPVT
SASNDPAGSYSINGILGIPRSNGEKRKRDDDGSDGSGPNSDSQGSVESLRKHLRADAFTQ
QQLEALDRVFERPSYPDVFPTAEHIKPEQANEYSLPALNSSLDEVKPSLSSTANPDLGPS
VSQSYPVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNE
AWRFSNPALLMPHREARPLPLLPLPMTVTSYHRNQINLQDHGLSLHIPPV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagacccctttacggcgatgcaccggcacggaggtgtgaac
cagctcggcggggtttttgtaaacggcagacccctcccggacgtggtcaggcagcggatt
gtggagctggcccaccagggcgtccggccctgcgacatctccagacagctgcgggtcagc
cacggttgtgtcagcaagatcctgggcaggtgggtgaagattccccggccaagatactat
gaaacgggaagcatcaaacctggagtgatcggtgggtctaaacctaaagtggccacccct
aaagtggtggaaaaaatcgcagactacaagagacaaaacccaaccatgtttgcgtgggag
atcagggacaggctgctggctgagggcatctgcgacaacgacaccgtcccaagcgtctca
tccattaacaggatcatccgaactaaagtccaacaacctttccatccatctcctgatggg
acatcgctgtcgacgccaggacacacgattgttccgagcacagcttctccacctgtaacc
agcgcctccaacgacccagcgggatcttactccatcaacggaattctgggaattccacga
tccaatggagaaaagagaaaaagagatgatgatggttcagatggttctggcccaaacagt
gattctcagggtagtgtggagagtttacggaagcacctgagggcagatgccttcacccag
cagcagctggaagctctggaccgggtctttgaacgcccctcgtaccctgacgtcttccct
acagcggagcatatcaaacccgagcaggctaacgagtactcgctccctgccctgaattcc
agcctggacgaagtcaagcccagtttatcctccaccgccaacccagacctgggccccagc
gtgtcgcaaagctaccctgtaggtcgagacatggccaacacaaccttacctgggtacccc
cctcacgttccgcccacaggacagggcagctacccgacctccacacttgctggaatggtt
cctgggagtgagttttcagggaacccctatagtcatccgcagtacacaacctacaatgaa
gcctggcgattcagcaacccagcattactaatgccgcatcgagaggctcggcccctccca
ctgctgccactgcctatgaccgtcactagttaccatcgaaaccaaatcaacctgcaagac
catggcctcagcctccatatccccccagtgtga
DBGET
integrated database retrieval system
