Oryzias melastigma (Indian medaka): 112154602
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Entry
112154602 CDS
T07439
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a
KO
K20638
Rho GTPase-activating protein 17
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112154602 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154602 (arhgap17a)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112154602 (arhgap17a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
DUF5790
Motif
Other DBs
NCBI-GeneID:
112154602
NCBI-ProteinID:
XP_024141449
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All DBs
Position
LG19:1668260..1706332
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AA seq
848 aa
AA seq
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MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMELVRVVSHNTHKKMASCLQGHIGA
DAEKRHKKLPLTALSQAMMEGGNQLGEDSLIGKMMEVCGDAENRLASELMQHELQIEKDV
LDPLSQLAEVEIPNILKQRKQLAKLVLDYDSAKARWLQATKSIISGTNTQALTAKADLLK
EEVDEAMNKVELCKDQLAADMYSFFSKEGDYARYFITLLEAQADYHRKSLTVLESVLPTI
QAQQDSWVEKPAFGTALEDHLKRSGREIALPIEACVMMLLETGMKEEGLFRIAAGASKLK
KLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTHQLYDEWIQASSVADPDKRL
QALWVVCDQLPKNNRNNLRYLVKFLAKLAQDSEVNKMTPSNIAIVLGPNLLWAKTEGSLA
EMAAATSVHVVAIVEPIIQHADWFFPEDVEFNVSGMFVMPTPASNHSNPSDYDCSTIERK
RPNSMVGPETDAARKDNTANKHSDHTLRRGSNTLGRKPHTSPAFQPPLPPVEAQGPGQPG
AEPPPQAPAGGSGPDTSQHSLTQSQPLLPQHSEELSNPKFRDSTPAPTPVPQRNGCGGGS
QAAGQQAAGSSGSGSTGPSPHMMRRGTKKQAPAPPKPTNPPPSQPINSSNHTPSSGTSQS
ISPTPRPMSSHSPTSPTSPMQPCATPRRQSNQPPIQAPNHPPPEPPTQGGSPAHPASGDQ
QSAEASPPGTPTPPDTPPPPTAGQDVVAPPSQSPYQSGSLPRPRPVPKPRNRPSIPPPPQ
PTTAGSETNGVCGSAYKMMDQTFRGRSRASVPELAVDQQPLMTSSSSSSSSFLPHPRDCD
LDTESTVL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagttcaatcggatgaagcagctcgccaatcaaacagttggcagagcggag
aaaacagaagtcctcagcgatgacctcctccagatcgagcggcgcatggagctggtgcgc
gtggtgtcccacaacacacacaaaaagatggcttcctgtctgcagggacacatcggtgca
gatgcagaaaagagacataagaaacttcccctcaccgctctttcccaggcgatgatggaa
ggcggaaaccagttgggagaagactccttgatagggaagatgatggaagtgtgtggagat
gcagagaaccgtctggcctcagagctgatgcagcacgagctgcagatagagaaggacgtt
ctggatccgctcagtcagctcgcagaggttgaaatcccaaacatcttgaagcaaaggaag
cagttagccaagttggtgctggactacgactctgccaaagcgaggtggttgcaggcaacc
aagtcgataatctcaggtacaaacactcaagcactgacggccaaggcggaccttttgaaa
gaggaggtggacgaggccatgaacaaagtggagctctgcaaggatcagctggctgcagac
atgtacagtttcttctccaaagaaggcgactacgctcgatactttatcacgctcttagag
gctcaggctgattaccacaggaagtccctcaccgttctggagagcgtcctgccaaccatc
caggctcagcaagactcctgggtagagaaaccggcgttcggcaccgcgctggaggatcac
ctgaagcgcagcgggagggagatcgctctgcccatcgaggcctgcgtcatgatgctcctg
gagacgggcatgaaggaggagggactgttcaggatcgccgccggagcgtccaagctgaag
aagctgaaggcggcgctggactgctccacctcccagctggaggagttctactccgacccg
cacgctgtggctggtgctctgaagtcctacctgagagagctcccagaacctttgatgacc
caccagctctacgatgagtggatccaggcgtccagtgtggcagacccggacaaacggctg
caggccctctgggttgtttgtgatcagctaccaaagaacaaccggaacaatttgagatat
ctggtgaagtttttagccaaactggctcaagacagcgaggtgaacaaaatgactcctagc
aacatcgccatcgtcctgggccccaacctgctgtgggccaagactgaggggagtctggca
gagatggcagctgctacttcagtgcacgtggtggccatcgtagagcccatcatccagcac
gcagactggttctttcctgaggacgtggagtttaacgtctctggcatgtttgtgatgccc
acgccggcctccaaccacagcaatccctcagattatgactgtagcactattgagaggaag
aggcccaacagtatggttggaccagagactgacgcggcacgcaaagacaacactgctaac
aagcactcggaccacacccttcgtagaggcagtaacaccttaggtagaaagccgcacacc
tcacctgccttccagcctcctttaccccctgtggaggctcaggggccggggcagcccggc
gccgagcccccgccacaagctccagcagggggttcagggcctgacacttcccagcatagc
ttgactcagagtcagccgctactacctcagcactcggaggagctcagtaacccaaagttt
cgagattccacccccgccccgacccccgtgcctcagaggaatggctgtggagggggcagc
caggctgcgggccagcaggctgctggaagctctggttctggatccacgggcccgagcccc
cacatgatgcggcgaggtaccaagaagcaggcccccgcccctcccaaaccaacaaacccg
ccccctagccaacccatcaactcttcaaaccacaccccttcctctggcacctcccagtct
ataagccccacccccagacccatgtctagccactcccccacatcacccacctcccccatg
cagccgtgtgccacgccccgacgccaaagcaaccagccccccatccaagcccccaaccac
ccgcccccagagccccccacccagggcggctccccggcccacccggcctcaggggaccag
cagagcgccgaggcctccccgccgggcacccccaccccaccagacacccctccgcccccc
accgccggccaggacgtcgtagcccctccctcccagtccccgtaccagtcgggctcgctt
ccccgaccgcggcccgtccccaaacctcggaacagacccagcatccctccacccccccaa
cccaccacagccggcagcgagaccaacggggtctgtggctccgcctacaagatgatggat
caaactttcagggggcggagtcgagcgtcggtccctgagctcgctgtggaccagcagccg
ctgatgacctcctcctcctcctcctcttcctccttcctgcctcatcccagagactgtgac
ctggacacggagagcaccgtcctataa
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