Oryzias melastigma (Indian medaka): 112154607
Help
Entry
112154607 CDS
T07439
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112154607
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Cadherin related
112154607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RibLong
Motif
Other DBs
NCBI-GeneID:
112154607
NCBI-ProteinID:
XP_024141452
Ensembl:
ENSOMEG00000011565
LinkDB
All DBs
Position
LG19:12074944..12087020
Genome browser
AA seq
862 aa
AA seq
DB search
MKKDKKTRALLLLLLLQYSWGQSDYAPYFFDNGPSSTNGNMALISISEDTPVGTQIYILN
GSDPEGDPVFYGLTFEKGSTEYFKVEPKSGNVTLIRELDREKQDEISVLVSITDGRNKVV
ETVRVFVSDANDESPEFLNLPFIIDIPEDTAPGRSIYKVHAVDRDLGSGGSVSYYLQSSP
FAKFTIDGHSGILRVKPGETLDYETTSTHFLTVVAKDGGGKYKGKQQVLTSTATVTINVL
DSQDMPPSFVGTPYFGYIYEVSVPGSEIYTVYAKDGDQGNPNPIHYSIMNGSDGVFDINS
TSGCITLTTHPSLLKKELYEIKVKASEVGVNNQLLDYDITTVTVRVVDLNNHPPTFYGEN
GPQSKFEVTMYEHPPAGEILRGFKITVNDSDQGANAKFKLRLVGPSRVLRVVPQTVLNEA
QVTIIVEDTSGIDFEKGPTLTFKLLAVEIDTPERFSATADIVINLLDTNDNIPTFTSEYY
IARVPENSPGGSSVVSVTAKDPDSGPWGEVKYTIYGSGSDLFSINPTSGLITTQPWTSLD
AEVRSKYNFYVKAEDSEGKYSLAEVFVTVLDMNDHSPEFDESLLEKTMIIGMPVKVEAVD
EDAESPNNVIEYSIMTADPDNAFDINADTGEIKLKPFIKSMEIVQNITKQKECRWSLVVQ
ARDRGSPSFSTTAVVNIDITEAAHLKGPMAAFLMKSRDNPLRALGLVIFIITVLVGVTAL
ISTVMYMRNSKSNRIGPARRIIKKRPKDQQPWTFKMPVIKFTDPGEKFLISDPENSPPQA
SGSPRLKPPPPVAPCLPPPPPSSSRSTERPRAVPTISGVLASKGSKKAKSGRRREGNMSS
ALVSELKMKLEQKINENNQGYY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacaagaaaacccgagctttgctgcttctcctgctccttcagtacagctgg
ggacaatcagattatgctccatatttctttgataatggtcccagcagtacaaatgggaat
atggccttgatcagcatctctgaggacacacctgttggaacacaaatctacatcttgaat
ggttccgatccagaaggggatccagtcttttatggtctcacctttgaaaagggctccaca
gaatatttcaaggtggaacccaaatcaggaaatgtgactttaattcgggagctcgaccga
gagaaacaagatgagatctcagtgcttgtgagcatcacggatggcagaaacaaagttgtc
gaaacagtcagagtgtttgtcagtgacgccaacgatgagtcacctgaatttctaaacctg
ccttttatcattgacatacctgaggacactgctccaggaaggagtatctacaaagttcat
gctgtagacagagatctgggctctgggggcagtgtttcatattacttacagagttccccg
tttgccaagttcaccattgacggccacagtggcatcctcagagttaaacccggcgagacc
ttggactatgagaccacatcaacacattttttgacagtggtcgcaaaggatggaggtgga
aagtacaaagggaagcaacaagttttgacctcaacagctactgttacaatcaatgttcta
gactcgcaagacatgcccccatcctttgtaggaaccccttattttggctacatctatgaa
gtctcggttcctggttctgaaatatatacagtatatgcaaaagatggagatcaaggcaat
cccaaccccatccattattctattatgaatggaagtgatggtgtttttgacattaatagc
accagtggatgcatcaccttgacgactcatccatctttgttgaaaaaggagctctacgaa
attaaagtcaaggcctctgaggttggggttaacaaccagctcctggactatgacattacc
acggtgacggtccgagtggtggatcttaacaaccatcctcccaccttctacggagaaaat
ggaccgcaaagcaagtttgaggtcactatgtatgagcatccacctgcaggggagatcctc
cgaggctttaagatcacagtcaatgactctgatcagggagcaaacgctaaattcaaactg
agacttgtcgggccgagccgagtccttcgagtggttccccagacggtcctgaatgaagcc
caagtcactattattgttgaagacacatctggcattgactttgaaaaaggacccactctc
acttttaagctgctggcggtggagatcgacactccggagcgcttcagtgccacggccgac
attgtgatcaacctgctggacacaaacgacaacattcccacgttcacgtctgagtactac
atcgccagggttccggagaactctcctggaggctccagtgttgtgtctgtaactgctaag
gacccagactctggaccatggggtgaagtcaaatacacaatttatggatcaggctcagat
ttgttttccatcaatccaacatctgggctgatcaccacgcagccatggaccagcctggac
gcagaggtcagatccaagtataacttttatgtcaaggctgaggattcagagggaaaatac
agcctggcagaagtctttgtcaccgtcctggatatgaacgaccattctccagaatttgac
gagagtctcctggagaagaccatgattattggcatgcctgtcaaagttgaggcggtggac
gaggatgcagaatctccaaacaatgtcattgaatactccatcatgacagccgatcccgac
aacgcctttgacatcaacgcagacacaggcgaaatcaagctgaagccgttcatcaagtcc
atggagattgtacagaacatcaccaaacagaaggagtgcaggtggtctctggtggtccag
gctagagacagaggttctccgtccttcagcacaacagctgtggtcaacattgacatcaca
gaggcggctcatctcaaggggcccatggcggcctttttaatgaaaagtagggacaatcct
ttgagagcgttagggttggtgattttcatcattactgttctggtcggagtgacagccttg
atctccacggttatgtacatgcgtaactccaagtcgaacaggattgggcccgcacgccgc
atcattaaaaagcgtcctaaagatcagcagccctggacctttaaaatgcctgttatcaag
ttcaccgacccgggagagaagttcctaatcagcgacccagaaaacagccccccacaagcc
tccggcagccctcgactgaagcctccacctcctgtagctccttgtcttccgcctccacct
ccgtctagctcacggtcaacagagaggccccgggcagtcccgaccatatctggtgttctc
gcctccaaagggtccaagaaagcaaagtctggtcgtcgtagagagggaaacatgagctct
gccttagtgtcggagctaaaaatgaagctggagcaaaaaatcaatgagaacaatcaaggt
tattattaa
DBGET
integrated database retrieval system
