Oryzias melastigma (Indian medaka): 112154639
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Entry
112154639 CDS
T07439
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112154639 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112154639 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112154639 (ldb3b)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112154639
NCBI-ProteinID:
XP_024141509
Ensembl:
ENSOMEG00000008672
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All DBs
Position
LG19:complement(13451591..13462714)
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AA seq
290 aa
AA seq
DB search
MGTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPASKAAGGSLAQGDIITAIDGVSTEG
LTHLEAQNKIKSATNRLSLTMQKSRRPAPVPTATPRVDSPMPVIPHQKVIANTAANVEYA
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
DSEEAGSPLAGVLPVKEPVVDCASPVYQAVIRPGDTTQDMSEWARRAANLQSKSFRILAH
ITGTEYLQDPDEEALQKARERFESEVKGPRFAKLKNWHHGLSAQILNVQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtacacagtgactctgaatggccccgctccatggggcttcagactacaggga
ggaaaagacttcaacatgccactaaccatctccaggataactcctgccagcaaggcagcg
ggtggcagcctggcccagggcgacatcatcacagccattgatggagtcagcaccgagggg
ctgacacacctggaggcccagaacaagatcaagtccgccacaaacagactgtcactcaca
atgcagaaatcaagacgtccggctccggtccccacggcaactccaagagtggactccccc
atgcctgtcatcccacatcagaaggttatcgcaaacacagctgcaaatgtggagtacgct
cccagcttcaaccccatcgctttgaaagactccgccctgtccacccacaagcccattgaa
gtgaggggtcccggaggaaaggccaccatcgttcacgctcagtacaacacgcccatcagc
atgtactcacaggacgccatcatggacgcaatagcaggacagtcgcaggccaaaggacac
gacagtgaggaggccggctctcccctggctggggttctgcccgttaaggagccggtggtg
gactgtgcgtcacccgtatatcaagcggtcatcaggcctggagacacgacccaggacatg
tctgagtgggctcggcgtgctgccaacctgcagtctaaaagcttcaggatcctggcccac
atcactggcaccgaatacctgcaagatcctgatgaggaagctctgcagaaggcgagagaa
aggttcgagtctgaagtcaaagggcctcgctttgccaagctgaagaactggcaccacgga
ttgtctgcacagatcctcaatgtccaggagtaa
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