KEGG   Oryzias melastigma (Indian medaka): 112154639
Entry
112154639         CDS       T07439                                 
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112154639 (ldb3b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oml04990]
    112154639 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:oml04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   112154639 (ldb3b)
SSDB
Motif
Pfam: DUF4749 PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 112154639
NCBI-ProteinID: XP_024141509
Ensembl: ENSOMEG00000008672
LinkDB
Position
LG19:complement(13451591..13462714)
AA seq 290 aa
MGTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPASKAAGGSLAQGDIITAIDGVSTEG
LTHLEAQNKIKSATNRLSLTMQKSRRPAPVPTATPRVDSPMPVIPHQKVIANTAANVEYA
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
DSEEAGSPLAGVLPVKEPVVDCASPVYQAVIRPGDTTQDMSEWARRAANLQSKSFRILAH
ITGTEYLQDPDEEALQKARERFESEVKGPRFAKLKNWHHGLSAQILNVQE
NT seq 873 nt   +upstreamnt  +downstreamnt
atgggcacgtacacagtgactctgaatggccccgctccatggggcttcagactacaggga
ggaaaagacttcaacatgccactaaccatctccaggataactcctgccagcaaggcagcg
ggtggcagcctggcccagggcgacatcatcacagccattgatggagtcagcaccgagggg
ctgacacacctggaggcccagaacaagatcaagtccgccacaaacagactgtcactcaca
atgcagaaatcaagacgtccggctccggtccccacggcaactccaagagtggactccccc
atgcctgtcatcccacatcagaaggttatcgcaaacacagctgcaaatgtggagtacgct
cccagcttcaaccccatcgctttgaaagactccgccctgtccacccacaagcccattgaa
gtgaggggtcccggaggaaaggccaccatcgttcacgctcagtacaacacgcccatcagc
atgtactcacaggacgccatcatggacgcaatagcaggacagtcgcaggccaaaggacac
gacagtgaggaggccggctctcccctggctggggttctgcccgttaaggagccggtggtg
gactgtgcgtcacccgtatatcaagcggtcatcaggcctggagacacgacccaggacatg
tctgagtgggctcggcgtgctgccaacctgcagtctaaaagcttcaggatcctggcccac
atcactggcaccgaatacctgcaagatcctgatgaggaagctctgcagaaggcgagagaa
aggttcgagtctgaagtcaaagggcctcgctttgccaagctgaagaactggcaccacgga
ttgtctgcacagatcctcaatgtccaggagtaa

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