Oryzias melastigma (Indian medaka): 112154657
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Entry
112154657 CDS
T07439
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112154657 (trim16)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112154657 (trim16)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112154657 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
CC_BshC
UPF0172
DUF4407
DUF6468
Motif
Other DBs
NCBI-GeneID:
112154657
NCBI-ProteinID:
XP_024141539
Ensembl:
ENSOMEG00000020544
UniProt:
A0A3B3DW06
LinkDB
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Position
LG19:complement(23422012..23428677)
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AA seq
599 aa
AA seq
DB search
MADTEKVKTLSKQQPAAGGDTDTELHEKPEPKLSPVSAGPADLNKTAQVPEIKSDEKQSQ
EPKVPEEPKIHEDLKESEDSQKSNEEKPETEEKEEPLGPDDVVCDSCIESPRRAVKSCLT
CLVSYCDTHLRPHLENPKFQNHRLLEPLRDIERRTCESHKWPLDLFCSADTCCICKDCVP
ESHKGHNITPVVEARRRTEKELKEKQVDMVQTVTTAENAINQLQVNTVSIEHSVTEVQEV
IEAQFKELEAMVEKAKRELKVFLEGEEKQALRQAEGIRVHLEQRCKELKKAQEQMEKLSR
HKNDVDFLQEYADWKKEAPDYSLPGVYIGLMDSLKVFSRVIVDSTKKICDMLESSYIKKV
RHEEEMVIQTTVRTTVATLHSKSIPDPKTHADFLKYASVVSFDPDTAHTFLRLTEENKKV
TNTTPWQHPYPDLPDRFEHCRQVLAAESFYMNRHYFEADISGEGTHIGLTYKSIERKGNE
SSSCIAGNDYSWCIQWNGRTFSAWHSNEETPLNVEKFTRVGVYLDYIQGRLAFYGVDETM
TLLHEFKAKFLEPLYPAFWLPKKENIISLVASGEPLPLKSPSPPSSPATGAVFAKTKAT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaaaaggtaaagactttatccaaacagcagccagcagctggtggagac
acagatacagaacttcatgagaagcctgagccaaaactgagtcctgtcagcgctggacct
gctgatttgaacaagactgcacaagtacctgagatcaagagcgatgagaagcaaagccag
gagcccaaagttccagaggaacctaagatccacgaggacctgaaagagtctgaggattcc
cagaagtctaacgaggaaaagccagagacagaggagaaggaggaacctctgggccctgac
gatgtggtttgtgactcgtgtattgaaagtcctcgcagggctgttaagtcctgcctcacc
tgccttgtttcctattgcgacacccacctccggcctcacctggagaacccaaagtttcag
aaccaccggcttctggaaccactcagagacatcgagagacgaacctgtgaaagccacaag
tggcccctggaccttttctgctcagcagacacctgctgcatctgtaaagactgtgtgcca
gaaagccacaagggccacaacatcacgccggtggtggaggctcggagacggacagagaaa
gagctgaaggagaagcaggtagatatggtgcagacagtgacgacagcggagaatgccatc
aaccaactccaggtcaacaccgtttctattgagcactcagtgacagaagtgcaggaagtg
attgaggcgcagttcaaggagctggaggcaatggtggagaaagcaaagagggagctgaag
gtgttcctggagggtgaggagaagcaggcgctgcggcaggccgagggaatccgggtacat
ctggagcaacgctgcaaggagctgaagaaggctcaggagcagatggaaaaactttccagg
cacaaaaatgatgtggacttcctccaagagtacgcagactggaagaaggaagcccccgat
tactctctgccgggggtctacatcggcctgatggacagtctgaaggtcttcagccgggtg
attgttgactctacaaagaagatctgtgacatgctggagtcttcctacattaaaaaagtc
agacatgaagaggaaatggttattcagacaactgtgaggacaactgttgcaactctgcac
agcaagtccatccctgacccaaagacacacgccgacttcctcaaatatgcctctgtggtg
agttttgatcctgacacggctcacacgttccttcgtctgactgaggagaacaagaaagtg
accaacaccaccccctggcagcatccttaccctgacttacctgatcgattcgagcactgt
cgtcaggttctggctgcagagagcttctacatgaaccgccactactttgaggcggacatc
agtggtgagggcacgcacattggcttgacctataaaagtattgagcgtaagggcaacgag
agcagcagctgcatcgcaggaaacgactactcctggtgcatccagtggaacggacggacc
ttttctgcctggcactccaacgaggagactccactgaatgtggagaagttcactcgagtt
ggggtttatttggattacatacaaggccggctggctttctatggagtggatgaaacaatg
acgctcctccacgagtttaaggcaaagttcctggagcctctatatccagcgttctggctg
cctaagaaggagaacatcatctccttagtggcttctggggagcctttaccactgaaaagc
ccgtctcctccctcttcacctgcaactggagctgtttttgcaaaaaccaaagcaacttaa
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integrated database retrieval system
