Oryzias melastigma (Indian medaka): 112154668
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Entry
112154668 CDS
T07439
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112154668
03021 Transcription machinery [BR:
oml03021
]
112154668
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112154668
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112154668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DIOX_N
Motif
Other DBs
NCBI-GeneID:
112154668
NCBI-ProteinID:
XP_024141562
Ensembl:
ENSOMEG00000022642
LinkDB
All DBs
Position
LG19:complement(7994683..8003549)
Genome browser
AA seq
443 aa
AA seq
DB search
MESALEWTPENLQKLFASLKASIPETEEASIYSRGLKRVDWEKVAFPPFSADQCREMWTS
FMLNMRKVRTLKEIVEEAESLVSNPNTDDTIQPQFPKIPRPPNVLYFEKNLEKFQRRHPE
RDTQKLLKSASKKFNKLPEEEKAKYEEKYSLECAEYNKKMQSFCQNYPGFTPQKIKKRDL
PASVKKSSEKHPDLPPKPPTNGYLLFCKEQSLSVRSLEKSRFIKEWARRWRDLSQPQKKN
YADRCRELNEEYNVKMNAYLERFDEETRQQFIEKNKITMSSKKKSARSRALKRWLDEPKM
PSSSGNTIFIQEQMQLLKEKIPITNERFCEVNKMWKSLSEETKEEYKEKRKNKIQQYSEE
LQNWFLAMTPQKRKEYWKSNPSKRKYLGVNEKFRKDMQSCKTSDSEDEEIVFSSSEEEDN
TLILGKEEDYEEEDDIEIHMFEI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgctttagaatggaccccggagaaccttcagaagttattcgcctcgttgaaa
gccagcatcccagaaacggaggaagctagcatttatagcagaggactgaagcgagtggac
tgggagaaagtggcgtttccccctttttctgctgaccaatgccgggaaatgtggacatca
ttcatgcttaacatgcgcaaggttcggaccctgaaggaaatagttgaggaagctgaaagt
cttgtttccaatccaaatactgacgatacgatccaaccacagttcccaaagatacctcgt
cctccaaatgttctctattttgagaaaaacttggaaaaatttcaaagaagacacccagaa
cgtgacacacaaaaacttcttaaatcggcatccaagaagttcaataagctcccagaagag
gagaaggccaagtatgaagaaaagtacagccttgaatgtgcggaatacaacaaaaagatg
caatcgttctgtcaaaattaccctggttttacccctcagaagatcaaaaaaagggatctt
cctgcaagtgttaaaaaaagctctgaaaaacatccagacttgcctcctaaacctccgact
aatggatacttgcttttctgcaaggagcagtctttgtctgttagaagtttagaaaaaagc
agatttattaaagagtgggctcggcgctggcgggatttgagtcaaccgcagaagaagaat
tatgctgatcgctgccgtgagctgaatgaggagtacaacgtcaagatgaatgcttacctg
gagaggtttgatgaagagacgcgtcagcagttcatcgaaaagaataaaatcacaatgagc
agtaagaaaaagtctgctagatcgagagccctaaaaagatggctggatgagccgaagatg
ccatcttcatccgggaacacaattttcattcaagaacagatgcagcttctcaaagaaaaa
atcccgattacaaatgagcgtttttgcgaggtgaacaaaatgtggaaaagcttgtcagag
gaaactaaagaagaatacaaagaaaagagaaaaaacaagattcaacagtactcggaagag
ctgcagaattggtttttggcgatgacgccacaaaaaaggaaggaatattggaagtcgaac
ccatccaaaagaaaatatctgggtgtaaatgaaaagtttcgcaaagatatgcagtcgtgc
aaaacttcagattcagaagatgaggagattgtgttcagcagcagtgaagaagaggataac
actttgatccttggcaaggaagaagattatgaagaggaagatgatattgagatccacatg
tttgagatctaa
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