Oryzias melastigma (Indian medaka): 112154694
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Entry
112154694 CDS
T07439
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112154694 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112154694 (rangap1b)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112154694 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
Nop14
Lin-8
CDC45
Motif
Other DBs
NCBI-GeneID:
112154694
NCBI-ProteinID:
XP_024141601
Ensembl:
ENSOMEG00000008703
LinkDB
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Position
LG19:complement(538861..548519)
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AA seq
563 aa
AA seq
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MASEDIAQLAETLSKVHVGDGELSYKGLGLKLDDAESVVELVRDIRQFSDLRALRLEGNT
VGVEAAQTIAKALEDKEMLQRCYWSDMFTGRLRSEIPTALMSLGAALTSAGSRLTELDLS
DNAFGPDGVKGIEPLLKSASCHTLRELRLNNCGMGIGGGKILAEALTECHRQSSALGAPL
RLRVFMAGRNRLENEGASALAKAFKSMGSLEEVHLPQNGINHAGVTALAAAMRHNPELRV
VNLNDNTFTKRGALAMAHALRPLRNVQVINFGDCLVRSEGAVALAAVLREGLPALREVNL
SFGEITEAAALVVAQAVADKPSMEKVDLNGNCLGEDGCEALRDLMENVDKGDLLASLSDD
EGEPDEEEEEDSESEEDEATDEESEEDGDIVKENGLTREDSPSKSQSQAELLTFLRCPSV
EKLRELKAALQEQVQTSELHQAAEVLLQIASLYGEDPETKNSVLQAFDEVLKKLLSGSVL
HSYCVLSTLLVRMGLLKGEGKVKKASVSPGHLLCLEHAVQQDVFSPHHASLLFAFTSRIR
EAPPSCRGASEKLNAALEKKCKH
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagaggacatcgctcagctggcggagactctctccaaggtccacgtcggggat
ggagagctgagctacaaagggctgggtcttaagctcgatgacgccgaatcagtggtggag
ctggtgcgggacatccggcagttctccgacctgagagctctgcggctggaggggaacacg
gtgggagtggaggccgctcagacgatcgccaaagctctggaggacaaagagatgctccag
agatgctactggagtgacatgtttactggaaggctgcgctctgaaatccccaccgctctg
atgtcgctcggcgccgccttaacgagtgccgggtccaggctaacggagctcgatctgagc
gataacgcctttgggccggacggcgtgaagggaatcgagccgctgttgaagagcgcctcc
tgccacacgctgagggagctgcggctcaacaactgcgggatgggaatcggcggcggaaag
atcctggcggaggctctgaccgagtgtcacagacagtcgtcggccctcggagcgccgctc
aggctgagggtgttcatggcggggaggaaccggctggagaacgaaggagccagcgccctg
gctaaggccttcaagtcgatgggcagcctggaggaagtccacctgccccagaatgggata
aaccacgccggcgtgacggcgctggctgcagccatgcgacacaacccggagcttcgggtg
gtgaacctgaacgacaacaccttcaccaagagaggagcgctcgccatggcgcacgctctg
aggcccctcaggaacgtccaggtcatcaacttcggcgactgtctggtccgctccgagggg
gccgtggcgctggccgccgtcctgagggaggggctgcccgcgctgagggaggtgaacctg
tcgttcggggagatcaccgaggctgccgctctggtggtggctcaggcggtcgccgacaaa
cccagcatggagaaggtggacctgaacggtaactgtctaggggaggacggctgtgaggct
ctaagggacctcatggagaacgtggataaaggagacctgctggcctcgctcagcgacgat
gaaggagaacctgacgaggaggaggaggaagacagtgaaagtgaggaggatgaagccaca
gatgaggagagcgaggaagatggcgacatcgttaaggaaaacggattaacgagagaagac
agtccttcaaaatcccagagccaggcggagctcctgaccttcctcagatgtccgtcagtg
gagaagctcagagagctgaaggcggctctgcaggaacaggtccaaacctctgagctccac
caagccgctgaggttcttctacagatcgcttctctgtacggcgaggatccagaaacgaag
aactccgtcctccaagcgttcgacgaggttctgaagaagctgctgtccggttctgtcctt
cactcgtactgcgtcctctccacgctgctggtccggatgggactcctcaagggagaggga
aaggtgaagaaggcgagcgtgagtccaggtcacctcctgtgtttggagcacgccgtccag
caggacgtcttctcgccgcatcacgcctcgctgctgttcgccttcacgtccaggatccgt
gaagccccgccgtcgtgccgcggcgcctccgagaagctcaacgccgctctggaaaagaaa
tgtaaacactga
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