Oryzias melastigma (Indian medaka): 112154718
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Entry
112154718 CDS
T07439
Symbol
phgdh
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00260
Glycine, serine and threonine metabolism
oml00270
Cysteine and methionine metabolism
oml01100
Metabolic pathways
oml01200
Carbon metabolism
oml01230
Biosynthesis of amino acids
Module
oml_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112154718 (phgdh)
00270 Cysteine and methionine metabolism
112154718 (phgdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112154718 (phgdh)
Enzymes [BR:
oml01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
112154718 (phgdh)
1.1.1.399 2-oxoglutarate reductase
112154718 (phgdh)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112154718 (phgdh)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
112154718
NCBI-ProteinID:
XP_024141617
Ensembl:
ENSOMEG00000003140
UniProt:
A0A3B3BB12
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Position
LG21:18608848..18616683
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AA seq
527 aa
AA seq
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MAPTSIKSVLISESVDPRCRTILEENGIQVTEKQNMKKEELIAEIGLYDGLVVRSATKVT
ADIISAAHNLKIIGRAGTGVDNVDVDAATHKGIIVMNTPSGNTISAAELTCALLMSLSRN
VPQAAMSMKQGNWDRKKFMGSELFGKVLGIVGLGRIGKEVATRMQAFGMKTIGYDPITPP
EVTASWGVEQMSLEQLWPLCDYITVHTPLMPSTVGLLNDDTFAKCKKGVKVVNCARGGII
DEAALLRALESGQCGGAGLDVFNEEPPKNRSLVDHPNVISCPHLGASTKEAQARCGEDIA
QQIVDMVKGKNLVGAVNAQVLASTFSQESHLLIKLGESLGALLQSCSAAKKPLSWVQITT
QGECMKSCAGYMKSAVLVGLLSQDTERRPNLINVLSLSKQKEIEVSQTHGASEGDGVCKV
ELVASGCRYNVSGSVQGGIPVLLELNGSVFRQPIALCGNLLFFKASGGPQLLSSLAGVLT
ANGVEIQSFSAPTAHPEDPWHCMGVSSLLPDLSVLKPVVKDASQLQI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggccccgacatccatcaaatccgtgctgatcagtgaaagtgtcgatccccgctgcagg
acgatcctggaggaaaacgggatccaagtgacggagaagcagaacatgaaaaaggaggaa
ttgattgcagagattgggctctatgatggccttgtggttagatctgcaacaaaggtaaca
gctgacatcatcagtgcagctcacaacctcaagatcatcgggagggcggggaccggtgtg
gataacgtggacgtggatgctgccacccataagggcatcatcgtcatgaacacaccgagc
ggtaacacaattagtgccgctgagctgacctgtgcactgctgatgagcctttcaaggaat
gtgcctcaagctgcaatgtcaatgaaacaagggaactgggaccgtaaaaagttcatgggc
tcagagctgttcggcaaagttcttggaatagttggacttggaagaatcgggaaggaagtt
gcaacgagaatgcaagcctttggcatgaagactattggctacgatccaatcactcctccg
gaggtgacagctagctggggggtggagcaaatgtctctggagcagctttggcctctgtgt
gattacattaccgtccacactcccctcatgccctccactgttggtctcctcaatgacgac
acttttgctaagtgcaagaaaggagtgaaggttgtgaactgtgcgagagggggcatcatt
gatgaggctgctctgctgagagctttggagtctggacagtgtggaggagcgggacttgac
gtctttaatgaggagccccctaagaaccgctctctggtggaccatcccaacgtcatcagc
tgtcctcacctgggcgccagtacaaaggaggctcaggctcgctgtggggaagacattgcc
cagcaaattgtagacatggtgaaaggcaagaacctggttggagcagtcaatgctcaggtt
ttggccagtacattctcccaggagtcccacctcctcatcaaactcggagaatctctggga
gctttgcttcagtcctgcagtgctgctaagaagccgctcagctgggttcaaatcaccact
caaggggagtgcatgaagtcctgcgctggttacatgaagtcagctgtgctggtcggcctg
ctcagtcaggacacggaaagacgcccaaacctcatcaatgtgctgagcctgtccaagcag
aaagaaatcgaggtgagtcaaacacacggtgcatctgaaggtgatggtgtgtgtaaggtg
gagctggttgccagcggctgcagatacaacgtcagcggatcggttcaaggagggattccg
gtcctgcttgagctaaacggcagcgtgttccgacaacccatcgctctctgtggaaatctg
ctgttcttcaaagcttctggtggtcctcagctgctgtcttcactggctggtgtgctgact
gcaaacggagtggagattcagagtttcagcgcccccaccgcccaccctgaggatccgtgg
cactgcatgggggtgtcttctctcctgccagatctgagtgtcttgaagcctgtggtaaag
gatgcatcacagcttcagatttaa
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