Oryzias melastigma (Indian medaka): 112154770
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Entry
112154770 CDS
T07439
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112154770
04091 Lectins [BR:
oml04091
]
112154770
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112154770
Lectins [BR:
oml04091
]
C-Type lectins
Others
112154770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
112154770
NCBI-ProteinID:
XP_036065666
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All DBs
Position
LG21:complement(23904513..23932031)
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AA seq
1358 aa
AA seq
DB search
MLSLAKNPFSWNEKGNISGLIGSLSLSTEDGSGIPVENLSEDIELIVDFYFFLRQIWLPR
PAGEQVNTTVLDLGNYSTTIIDVPSADTSLVIKMEPSLDPLPFKLYLGFTDYPTETNYVA
MAQMPLQGTTEEEKYTWIVQPEELKGNTGVHYLVVRPIVGPGIKSINASLSVTPIASSCR
FWDESILDWSTTGCKVGVKTTPMATQCLCNHLTFFGSSFFVTPNLVDPSQTAQLFATFAE
NPVVVCFVGALFVTYLLVVVWARRKDIQDTAKVKVTVLYDNNPKDEYRYLLCVRTGHRIG
ASTSSQVIATLLGAEGNSEPHHLTDQRKPLFERGAVDMFLITTPSFLGELQGIRLWHDNS
GSHPAWYVANIMVQDLQTEQKWNFLCNSWLALDMGDCCIDSIFPVSTEEELKRFSNLFFM
KTTRDFCDGHLWYSVVSRPAGSNFTCVQRVSCCFSLLLCTMLTSIMFYGIPTDPSEQVMD
LGQFEFTWQQFMVGVQSSLIMFPINVLIVSIFRNTRPRETSCCGGRKKKSKSIQKDGTSS
QMDTKAFLDIITKDVTRLADLLCKTSKNNIPTTESKFGPKEESEINTILSKMEDFIQERH
KAGDNRRFHLPESGGHVNPPSVLEATKKKSNKTQHLYRKLCHIDKELSLLGPSSFQNPHS
YSQALKQVQNMKRLIEDQLFPPTHVKVDEPKKFRPAEVAASDGKGKKTLCCHGMLPWWFV
FVGWLLVIATSVVSGYFTMLYGLKFGKQRSISWLVSMIISFFQSLLFIQPLKVICLAVFF
ALIIRKVEEEDLHNVEFVEEKRTGETKDHDASGMKRLLYEPPPPEAIERMRRNKIMQQKA
HALLKEILTYIGFLWMLLLVAYGQRDPNAFYLNQHIRSSFSGAASDSMSLEDVFTWANTT
LLTNLFAEYPGFITDGNSKLVGNARVRQLRVKEDSCQTAGLMHPLVADCNAPYSWDVEDM
GSYDTGWNRSLQDNISASTSSPWKYQTQTQLRGRLFWGKTAFYRGGGFVVELGPDLSNAS
STLEYLFENKWLDMYTRAIFVEFTVYNANVNLFCIITLLMETTAVGVFQFYSELQSIRLY
QSTDGLFFFVMAAEIIYLLFILYYMFLQAKLMRLQRWDYFRNKLNLLELSIILLSMSAVA
IFIRRTLLGNRDVAYYQTHKDQFASFYDTATADQQLQYLIAFLVLLATVKCWNLLRLNPK
MNLLTAALQRAWTDISSFLLIFGVLFVAYSVTSNLIYGWKLSSYKTFSDSLLTVISLQAG
IFNYDEVLNGDPVLGGLLVGSCVVFMTFVLLNLLISLVLVALNREQLLHKPSEEEEVVDL
LLSNIFSLIGIRYKDKKDTMTDSSGFALNNTKEITKSP
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtctggctaaaaacccattttcttggaatgagaaggggaacatcagtggccta
ataggctctctgtccctctcgactgaagatgggtctggtatccctgtggagaacttaagt
gaggatattgagttgatagttgatttttatttctttttgaggcagatttggttgccgagg
ccagctggagaacaagtgaacaccacagttttggacctgggaaattacagcacaacaatc
atagacgttccttcagccgacacctccttggttataaagatggagccttcgttggatcct
ttaccatttaaattgtacctgggtttcactgattatcccacagagactaattatgtggcc
atggctcaaatgcctctgcagggaacgacagaagaggagaaatacacatggattgtccaa
cctgaggaactcaagggaaacactggagtccactaccttgtggtgagacccatcgtgggt
ccagggataaaatccatcaatgccagtttatcagtgacccccatcgcatcttcgtgtaga
ttttgggatgaatctatattggattggagcacaactggatgtaaagttggtgtcaagaca
acacccatggccacccagtgtctctgcaaccacctcaccttttttgggagctctttcttc
gtcactcccaacctggtcgatccgtcgcagacggctcagctctttgcaacgtttgctgag
aatccagtggtggtgtgctttgtgggagctctctttgtgacttacctgttggtggttgtg
tgggcgcggcggaaagacattcaagacacagccaaggtgaaagtgacagttctctatgac
aacaaccctaaggacgaataccgctaccttctgtgtgtgcgcacaggccatcggatcgga
gcctccacctcctctcaggtgatagctacgcttctgggtgcggagggaaacagtgagcca
caccacctgaccgaccagaggaaacctctgttcgagcgaggcgccgtggatatgtttctg
ataaccacgccctccttcctgggggagctgcagggcatccgactgtggcacgacaactca
ggcagccaccctgcttggtacgtggccaatatcatggtacaagatctacaaacggaacag
aaatggaatttcctgtgcaattcttggctggcattagacatgggtgattgctgcattgat
agtatctttcctgtttcgacagaagaggagctgaagaggtttagtaacctcttcttcatg
aagacaacgagggatttctgtgacggacacctctggtactctgtggtcagtcgaccagcc
ggcagcaacttcacctgcgttcagagagtgtcctgctgcttctccctgctgctgtgcacc
atgctgaccagcatcatgttttacgggatcccaacagacccgtctgagcaggtcatggac
ctgggtcaatttgagtttacctggcagcaatttatggtcggagttcagagttccctcatc
atgttcccaataaacgtgctcatagttagtatcttcagaaacactcgtccacgagagact
tcttgttgtggaggcagaaaaaaaaagtctaaatccattcagaaggacggcacatcctca
cagatggacacaaaagcttttttggacatcatcactaaggatgtcacaagacttgctgat
ttgctctgtaagacgtcaaagaacaacatcccgaccacagagtccaagtttggacccaag
gaagaaagtgaaatcaacaccatcctctccaagatggaggatttcatccaagagaggcac
aaagcaggggacaatagacggtttcatctgccagagagcggtggtcatgtgaatcctcca
tcggtgctggaagcaactaagaagaagagcaacaagacgcagcatctatacaggaaattg
tgtcacattgacaaagagctgagcttgttgggtccctccagcttccaaaacccacacagt
tacagccaggccctaaagcaagtccaaaatatgaagcgtctcattgaagaccagctgttc
ccaccaacccatgtcaaagtggatgagccaaagaagtttcgtccagcagaggtcgctgct
agtgatggcaaagggaaaaaaactttgtgctgtcatggaatgctcccctggtggtttgtc
tttgtcggctggctgctggtgatagccaccagcgttgtgtcaggatatttcacaatgctg
tacggactgaaatttgggaaacaacgttccataagctggttggtatcgatgattatctcc
ttcttccaaagtcttcttttcattcagcctctgaaggtgatatgtctcgcagtcttcttt
gcgttgataataaggaaagtagaggaggaagacttacacaatgtcgaatttgtagaagaa
aagagaacaggtgagactaaggatcacgatgcaagcggaatgaaaagactcctctatgag
ccacctcctcctgaggccattgagaggatgagaaggaacaagataatgcagcagaaggct
cacgctctgctcaaagagatactgacttatataggcttcttgtggatgttgctgttggtg
gcatacggccagagagatcccaacgccttttacttgaaccaacacatcaggagtagcttc
agtggagcggcctcggacagcatgagtctggaggacgtattcacatgggccaacaccacc
ctgctcacaaacctctttgcagagtatccaggttttatcacagatggaaattccaaactg
gtgggtaatgccagagttcgtcagctgcgagtgaaagaggactcctgccagactgcaggg
ctcatgcatccattggtggcagactgcaatgctccatactcctgggatgtggaggacatg
ggctcctatgacactggctggaatcgctctctccaagacaacatttcggcaagcacttca
agtccctggaagtaccagacgcagactcagctcaggggaagattgttctggggcaaaaca
gcgttctacaggggaggaggctttgtggtggagcttggcccggatttatcaaatgcaagc
agcacacttgagtatctttttgagaataaatggctggacatgtacacaagagccatcttt
gttgagttcactgtttataatgcaaatgtgaacctcttctgcatcatcactctcttgatg
gagaccaccgcagtaggagtgtttcagttctacagtgagctgcaaagtatccgcctttac
cagtcaacggacggcctcttcttttttgtcatggctgctgagatcatttatttacttttc
atcctgtattacatgttcttgcaggccaaattaatgaggctgcagcgctgggattatttc
agaaataagttgaatcttctggagcttagtattattcttctcagcatgagtgccgtggcc
attttcatcaggaggacactgcttggaaaccgagatgtggcttattaccaaacccacaaa
gaccaatttgccagtttctatgacacggccacagccgaccagcagctgcagtatctcatc
gcgttcctggtccttcttgccaccgtcaaatgttggaacctgctcagactgaaccccaag
atgaacttgctcacagccgccctgcagcgagcctggaccgacatttccagttttctactc
atcttcggggtcttgtttgtggcatactccgtcactagcaacttgatttatggctggaag
ctttcgtcgtataagaccttctctgactctcttctgactgtcatcagtttgcaagcaggg
atcttcaactatgatgaggttttgaatggtgacccggttcttggtggattactcgtcggt
tcctgcgttgtcttcatgacatttgtgttgcttaaccttctcatctctttggttcttgtg
gcgctgaacagggagcagttactccacaagccctcagaggaagaagaggttgttgacctc
ctgctgagcaacatcttcagtctcattggcatcagatataaagacaagaaagacacgatg
actgacagcagcggctttgcccttaataacaccaaagaaatcactaaatccccttaa
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