Oryzias melastigma (Indian medaka): 112154882
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Entry
112154882 CDS
T07439
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112154882 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112154882 (bcor)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
112154882 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
112154882
NCBI-ProteinID:
XP_024141882
Ensembl:
ENSOMEG00000013019
UniProt:
A0A3B3C3Q8
LinkDB
All DBs
Position
LG21:complement(4561536..4599778)
Genome browser
AA seq
1802 aa
AA seq
DB search
MVDARLTPLAAMGLDRSTLLHDSLRLHSGVVYPSIRALPTEKSLETAALPLTYNRDGLPE
LIYKPDGSLDSCKAANGYLGLYKGTHPSLHKPVLVPRPGAEGLGLERRVGPGEKTSELGL
ASAGGSYLRMPWLTPYPEASMYPFMDTSKYATLNMYKASLLSQPNPYLPQHIPYPTLCAT
QGANVTSAASAAERLFYMPPYPPAPISSPLVATPMRIPTVTVAPSSLVHCQDKTLGVAPP
FAQQLHQPSSHPQHHQPALDRDRSPNRSSRPSRPPSRKASSNNNNTSSTSTSGTSVGTNN
SLPADSSHLSSRLPQPPPTSALFDKALDLQRPVARIGQPPTCSTSSISASTTSGQSIPHP
FSVTSMASEQSPPARPSPHKPRQRDGAPEHRSVGVDKGRSRSPSKVNFERPVHQTPPTKE
SAEKPLDLSGRMLEFGLSANDFPVKMDSIPCSGRYGLQNNRELLKENISVSSASHPHSVV
SSTSSKVSERPEMISTLRSSWVVPSPTSSHTQHTPGMPPSPRPSTDLGSTKAKGSSPSVV
KNKGLERVVNQQRSSSCPRIGEPNHSVPSSQHSGSSRAVSPKSNGEWVKHSPSHAEHHRE
GEKSSQASNRGEATPEVSSYKRPCLENGHPTGHLYLSQNDAYLNHSLAYASRYLHYPIPD
GMGLHSVPISGKGPVYTHPALLGNNSLYQPHLAAKHPLPYPPNLPGGPGSEYLAYNSQEM
AHPLMQTHSESKLLDRANHKPRAQEKSRVAVEEPGSGRDNAEKETRDTNTVKSDREAGAQ
GQGGSQSKSSSSAAASRETIVCIDLVHSDTDVESIPSVHKQPSAEASTKVNQNECHSNQN
LTKTDYKPKENPHHFSVHPGSNPNLKPNFNNGQPDTLFGKEKTPHEMPCPGVTSSPTSPG
DVSQEEESSEEQSPSPDPGVEDQSTLRCARTSGERSSGKDKGDRTNQASHFTPNCAAVMK
DLDQEKACKETVKEDSIVDLVESQGEADDEEEEGCQTSSKNSHRSSLAKRIANSSGYVGD
RFKCVTTELFADSSKLSREQRALQMEVISREGSNISQPAANWERAMMRFSELELKEKESG
AGVCASASAAGRELADGQHRERALESCQHTTRPTEREGVRPPYTNRVPVLQRCVGQREAL
PPSPKDGAQNCSLHGAKRPLRESEEAPGGTPTSTSSLCDDAGFGATRKRLHIKAEPEETE
EEEQAFHPEKRARLCIDEHEDASPDDDDDDEEVRKLKVCIELKGLRLSKPAAGAASPDGP
QIKQERAWPQPQPPRLLNHAQSQQRKIRPGQVEDRSAAAAAAAHRSDINRKWGCEKLPNG
VAALSLPSGQLKDREHPLNPFSGGLKEPRRGPPSPAPEPCIMGGTPPLKLRRHSDTDKPK
GKRPCKTKHTSHREKRKEAAAPGPGLRAAADPAAAEDEKLTEQRSAPRKRAASPNHYPCS
PVKPCSPTALAPPALQPQANGRAPPEVAELHKSPPAEPSAFRPIPPEARRLIVNKNAGET
LLQRAARLGYEEVVLYCLENKICEVNHRDYAGYCALHEACARGWLNIVQHLLDYGADINC
SAQDGTRPIHDAVENDHLDVVRILLSYGADPTLATYSGRGLLKMTHSDNMERFLTDYFAD
LQGRSDDDPGLYWEFYGSAVCESREEGGVYDILADPPGPDDEDEDDKREVFEFEFSDRPL
LPCYNIQVSLSQGPKNWLLLSDVLQRLRMSARTFRQAFPHMEVVTVAEAEFYRQASLSQL
FSCPEELEGFHPDSKELLDLVEDSAELAALLGSTLECLDDRWDHPGDKLKDRIKAIGKLG
SS
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgccaggttgacgcccctggccgcgatggggttggaccgaagcacgctgctg
catgacagccttcgtcttcacagtggggttgtgtacccaagcatcagggcgctgccaaca
gagaagagtttagaaacggctgcgcttccactgacatacaacagggatggtcttccggaa
ctcatttacaagcctgatggctctttggacagttgcaaggctgcaaatggatacctgggt
ctctacaaggggacccatccaagtcttcacaaacctgttctggttcctagacctggagct
gaaggtctaggcttggaacgcagagttggccctggtgaaaaaacgtcagaacttggattg
gctagtgcaggtggaagctacctccgcatgccgtggctgaccccctaccctgaagcaagc
atgtatcccttcatggatacgtcaaagtatgcaactctaaatatgtacaaagcctcctta
ctcagccaacctaatccctatcttccccagcacattccctacccaactctgtgtgcaacc
caaggggccaatgttacctcggctgcttctgctgccgaaagacttttctacatgccccct
tatcctcctgccccaatctcttcccctctggtggctacacccatgaggatccctaccgtc
acagtagccccctcatcgctggtgcactgccaagacaagacactaggtgttgcacctcct
tttgcacagcagctccatcagccatcttctcatcctcaacaccatcaacctgctttggac
agagaccgctccccaaacagaagcagcagaccaagcagacctccttctaggaaggcgtct
agtaacaacaataacaccagtagtaccagcacaagtggcaccagtgttgggactaataac
agtctgcctgctgattcctctcatttgtcttctcgcctcccccagcctcctcccacatct
gctctgtttgacaaagcactggatttgcaaaggccagtagccagaattggacagccaccc
acctgctccacctcttcaatatctgcctcaaccacatcagggcagtccatccctcatcct
ttctcagttaccagcatggcatcagagcagtcccctcccgcccgacccagcccccacaaa
cccaggcagagagacggggcccctgagcacagaagtgtgggggttgacaaggggcgcagc
aggtctccttccaaagtcaattttgagagaccagttcaccaaaccccaccaaccaaagaa
tcagcagagaaaccccttgacttgtctggaagaatgctggagtttggactgtctgctaat
gactttccagtgaagatggactctataccatgcagtggtcgttatggacttcagaataac
agagagttgttgaaggaaaacatttcggtttcttctgcctcccatccacactctgtggtc
agcagcacttcttcaaaggtctcagagagacctgaaatgatcagcactttacgctcctcc
tgggtggttccaagcccaacttcttcccacacacagcacacaccaggcatgccaccctct
cctaggccaagcacagacttgggttccacaaaagccaaaggctcctcaccctcggttgtc
aaaaacaagggtctagagagagttgtcaatcagcaacgaagctcgtcttgtcctaggata
ggagagcctaatcacagcgttccctcctctcaacactctggatcctcaagagctgtttcc
cccaaatctaatggtgagtgggtcaaacatagtcccagtcatgcagaacatcacagagaa
ggagaaaagtcctcccaggcatcaaatagaggtgaagctactccagaggtttcatcatac
aagagaccatgcttagagaatggtcaccccactggacacctttacctttctcagaatgat
gcttatttaaaccatagcctggcttatgccagcagatatctgcattaccccatcccagat
ggcatgggattacattctgtgccaatttcagggaaaggcccagtctacactcacccagcg
ctgcttggaaacaacagcctttatcaaccccacctggcagcaaagcaccctttaccgtac
cctcccaatctcccgggtggtccaggcagtgaataccttgcttataattcacaggagatg
gctcatcctttgatgcagactcactccgaaagcaagcttctagaccgggcaaaccacaag
cctcgagcacaggaaaagtccagagtagctgttgaagaacctggaagtgggagagataac
gctgagaaagagacgagagacaccaacacagtgaagtctgacagggaagcaggagcacaa
ggacagggcggcagtcaaagcaaaagctcttcctctgctgcagcatccagagaaacaata
gtctgtattgaccttgtgcactcagacacagacgttgaatctatcccttcagttcacaaa
caaccctccgctgaggctagcaccaaggttaaccaaaatgaatgtcacagtaatcaaaat
ctgacaaagactgattataagccaaaagaaaacccccaccatttttcagtccaccctgga
tcaaaccccaacctcaagccgaacttcaacaatggacagccagacactctttttggaaaa
gaaaagactcctcatgagatgccttgtcctggggtgacatcatctccaacctctcctggg
gatgtctctcaagaagaggagagctcagaggagcaaagcccaagtcctgatcctggagta
gaagaccagagcactttgcgctgcgcccgcacctcaggggagcgcagttctggcaaggac
aaaggggatcggactaaccaagcttctcattttactccaaactgtgcggctgtcatgaag
gacttggaccaggagaaagcctgtaaagagactgtaaaggaggacagtattgttgatcta
gtggaatctcaaggagaggctgatgacgaagaagaagagggctgccagacttcatccaag
aactctcataggtccagtctggccaaaagaattgcaaattcctctggctacgttggcgac
cgcttcaaatgtgtcaccactgagctttttgccgactccagcaagctgagccgcgaacaa
agagctttgcaaatggaagtcatatcacgagaggggagtaatataagccaacctgcagct
aactgggagcgggccatgatgcggttctcggagctggagctgaaggagaaggagagcggc
gctggtgtctgcgcgtctgcctcggcagcaggacgggagctggcggacggccagcacagg
gagcgcgcgctggagtcctgccaacacaccaccaggccgacagagagggagggtgtccgg
ccgccctacaccaacagagttcccgttctccagaggtgtgtcggccaacgtgaagccctg
cctccgagccccaaagatggggcccagaactgcagcctccacggagcgaagaggccgctg
agggaatccgaggaggcccccggcgggacccccacctccacctcgtcgctctgcgatgac
gccggcttcggagccacaaggaaacgcctacacatcaaggcggagccggaagagacggag
gaggaggagcaggcgttccacccggagaagagagccaggctttgcatagatgagcatgag
gacgccagtcccgacgacgacgatgacgacgaggaagtgaggaagctgaaagtctgcatc
gagctgaaagggctgcggctcagcaagcctgctgcgggcgccgcttcccccgacgggccc
cagatcaaacaggagagagcgtggccccagccccagcccccgcggctcctgaaccatgcc
cagagccagcagcgcaagatcaggccgggtcaggtcgaggacaggagcgcagcggcggcg
gcggcggcgcacagaagtgacatcaacaggaaatggggctgcgagaagctacctaatgga
gtggccgccttgtctcttcccagcggccagctgaaggacagagagcacccgctgaacccc
ttctcaggtggcctcaaggagcccaggcgggggcccccctccccggcccctgagccctgc
atcatgggaggcacccctcccctcaaactccgtcgtcatagcgatacggacaaacccaag
ggcaagcggccatgcaagaccaaacacaccagccacagggagaagaggaaggaggctgcg
gccccggggcccggcctgcgcgccgcggccgatcccgccgcagccgaggatgaaaagctg
actgagcagcgcagcgctccgaggaagagagccgcctctcccaatcattatccctgctcc
ccagtcaagccctgctcccccaccgcgctcgcgccgcccgcccttcagccacaggcgaac
ggcagagcgccgccagaggtggcggagctgcacaagagcccccccgccgagccctccgcc
tttcgtccgatcccaccggaggctcggcggctgatagtgaacaagaacgctggggagact
cttctgcaaagagccgcgcgcctgggctacgaggaggtggtcctgtactgcctggagaac
aaaatctgtgaggtgaaccacagagactacgctggctactgcgctctccatgaggcctgc
gcccgaggctggctaaacatagtccaacacctgctggattacggcgcagacatcaactgc
agcgcgcaggacggcacacgaccaatccacgatgccgtggagaacgaccacctggacgtg
gtgcgcatcctgctgtcttacggagccgaccccacactggccacctactccgggcgcggc
ctcctgaaaatgacccacagtgacaacatggagagattcctcacagattattttgctgac
cttcagggccgctcagatgacgacccagggctttattgggaattctatggcagcgctgtg
tgtgagtctagagaagagggcggtgtttatgacatcttggcggaccctccaggcccagac
gacgaagacgaggatgacaaaagggaggtgtttgagttcgagttttccgaccgacccctg
ctgccctgctacaacatccaggtgtccctctcccagggaccaaaaaactggctgctgctg
tccgatgtgctgcagcggttgcggatgtccgctcgcactttccgacaggccttcccccac
atggaggtggtgaccgtggccgaggcggagttctaccgccaggcctccctgtcccagctc
ttctcctgccccgaggagctggagggctttcacccggacagcaaggagctgctggacctg
gtggaggacagcgccgagctggccgcgctcctaggctcaacactggagtgtctggacgac
cgctgggaccacccaggggacaaactcaaggacagaatcaaggcaattggcaagctgggc
tcctcctga
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integrated database retrieval system