KEGG   Oryzias melastigma (Indian medaka): 112154915
Entry
112154915         CDS       T07439                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X2
  KO
K15188  cyclin T
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112154915 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112154915 (ccnt2a)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112154915 (ccnt2a)
    Brd4/P-TEFb complex
     112154915 (ccnt2a)
    7SK RNP complex
     112154915 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 112154915
NCBI-ProteinID: XP_024141930
Ensembl: ENSOMEG00000011738
LinkDB
Position
LG21:24065555..24076049
AA seq 685 aa
MAACRGSSSKWFFTRDQLESTPSHRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCTQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKAENAQLTDNSFAGPSVLQGDLSLPGSSSSNPNF
SKLDTAFPVPLPGQSRGTPFSMDTIVNTYMPGSHSEWPQSNQIQPGYHSMCVKEEPVSVP
VQESALALQASGSSLLQHPPYGAEKMMDLNFIKQEQKGAGKQSGYPPPAQPSPAMKLSLD
RYREKHGGESAAPQQKRRQEQHGGVLDCDVRGDASSSATYTPFTVSQLEYRKLPHPSAHN
AGGTSTASPMKTKGRHHGDKRDKSSAKLSMAMPGSSLQLEKSGQLSKDELKMKIKVSSSE
RHSSSDEGIASNNKNKHSSPLVTKEKHRGGEHNLHRSHKLSHLLAHSGNGRGAAEGPAGP
LRGPPVLISMEGSTHGHPTSNSLSSSRKRVYTDGSHNHHSSSSSSSFSKVSKLSKGGAVA
AGGLRTSQQCPPPGESPHELGDQRR
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcggcgtgccgggggtcttcgtcgaaatggtttttcacccgggaccagctggaaagc
acgccttcccaccgatgtggagtggaaccggaccgggaactgtcctatcgacaacaggcg
gcaaatttgatccaagatatgggtcagaggctcaatgtctcccagttaacaataaataca
gcgattgtttacatgcatagattttatatgcaccattctttcaccaaattccataggaat
ataatatctccaactacattgttcttggctgcaaaagtggaagagcaaccccggaaactc
gaacatgtgattaaagttgcacacgcatgtctgaatcctcaagaaccgcctctagacaca
aaaagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgtacc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctgcacctcactactttctgcctccagtacaagcccaccgtgatcgcctgcgtgtgcatc
catttggcctgcaagtggtcaaactgggagattccagtttctactgacgggaaacactgg
tgggagtatgtggacaactctgtcactctggagctgctcgacgagttgacccatgagttt
ctgcagatcttggaaaaaactcctagtcggttaaagaggatacgcaattggagggcaacc
caagctgccaaaaagccgaaagctgaaaacgcccagttgactgacaactcattcgctggt
ccttcagttctccaaggcgacttgtctcttcctggaagctcctcgtccaatcctaatttc
tccaaacttgacactgccttccccgttcccctgccaggccagtccagaggaacccccttt
tctatggacactattgtcaacacctatatgccaggaagccacagcgagtggccccagagc
aaccagattcaaccagggtatcattccatgtgtgtgaaggaagaacccgtcagcgttcct
gtccaagaatccgctctggctttgcaggcctccggctcctctctgcttcagcatccgcct
tacggggctgaaaaaatgatggacctcaacttcataaaacaagagcagaaaggagccggg
aagcagtcaggttacccccctccagcacagccctctccagctatgaagctgtctttggat
aggtacagagagaagcacggcggggagtctgctgccccccagcagaagcgaaggcaagag
caacatggaggagtcttggactgcgatgtgcgaggggatgcatcatcctctgctacatat
acaccgttcactgttagccaattagaatatagaaaactgccccacccgagcgctcacaat
gctggaggcaccagcactgcctccccgatgaagacgaaggggcgtcaccatggtgacaaa
cgggacaagagctcagctaagctttccatggctatgccagggtccagtttgcagctggag
aaaagtggacagctaagcaaagatgagctgaagatgaagatcaaggtgtcttcatcagag
cgccacagctcctctgatgaaggaatagcttccaacaacaagaacaaacattccagcccg
ctcgtcaccaaggagaagcaccggggaggggagcacaacctccatcgctcacacaagctc
agccacctcctcgcgcacagcggcaacgggcgaggggctgcagaggggcccgcgggcccg
ctgcggggacccccagtgctgatcagcatggagggatcgacgcacggacacccgacgtcc
aactctttgagctcgtcgcgcaaaagagtctacacagacgggagccacaaccaccactcc
tcctcatcctccagctccttctccaaagtgagcaaactttccaagggtggcgctgtcgct
gcaggtgggctgcggacctcgcagcagtgtcctccgcctggtgagtcaccacacgagctg
ggagaccagcgacgctga

DBGET integrated database retrieval system