Oryzias melastigma (Indian medaka): 112154917
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Entry
112154917 CDS
T07439
Symbol
itgb2
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04145
Phagosome
oml04514
Cell adhesion molecule (CAM) interaction
oml04517
IgSF CAM signaling
oml04518
Integrin signaling
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112154917 (itgb2)
04517 IgSF CAM signaling
112154917 (itgb2)
04518 Integrin signaling
112154917 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112154917 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112154917 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154917 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112154917 (itgb2)
04515 Cell adhesion molecules [BR:
oml04515
]
112154917 (itgb2)
04090 CD molecules [BR:
oml04090
]
112154917 (itgb2)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
112154917 (itgb2)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112154917 (itgb2)
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin beta subunits
112154917 (itgb2)
CD molecules [BR:
oml04090
]
Proteins
112154917 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
vWA_SIBA-E
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
112154917
NCBI-ProteinID:
XP_024141932
Ensembl:
ENSOMEG00000017567
LinkDB
All DBs
Position
LG21:complement(28111503..28125090)
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AA seq
785 aa
AA seq
DB search
MDQALALLLLLLLAENGLGQQKEVCLKSVVNSCSDCIKAGPYCSWCQQLNFTRGGKQETI
RCDTRAQLKEKGCMEEHILSPGNNMTVSENLPLSSSSGGGEPVQLSPQKISLKLRPGLPK
TFQVSFKRAEGYPVDLYYLMDLSYSMKDDLEKVKGLGEDLFEALNKITRDAQIGFGAFVD
KTVLPYTNTNKEKLERPCESKTEECQAAFGYRHVLSLTNSKERFRTEVSGQKISGNLDSP
EGSLDAMMQAAVCKDVIGWRNSSTRLIVLATDAGFHMAGDGKLAGILEPNDEGCHMQNNL
YIKSNDMDYPSVGQLARQLEKNNIQPIFAVTQNMETVFKELSKLIPKSEVGVLSEDSRNV
VQLIENAYKRLTSKITLAHSSLPEDVQILYKPVCKHGEGESASQGVCDRVGEGEEISFNI
TVTADSCMKEEKSFNIKLLGIRDTLTVSLSTTCDCNCQDDTNINHEHCNWNGTVSCGICR
CNNGFVGQFCSCAIGDKDKETLKQQCQKDNGTECEGRGDCECGRCSCHTTESGKSYYGEF
CQCVDEQCPKFNNKECSGHGDCKCGKCECEKGYQGSACQCKESNEDCRPAGVALLWEKNH
VCYGRGVCICGTCNCNEGYQVPFCEKCLGCSDPCQTQMNCVECLGFNSGVLEKNCNENCR
GLSHQLVESFNMSGKQCQQKDSEGCWVKFRLQELFGVDRYKAEILRERDCPEPPNVIAII
GGSLAGVALIGLLVLMLIKLLIHLQDLKEFRKFENEQKKSKWAKADNPLFQGATTTVANP
TFTGE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggctttagctctcctgctgctcctgctgttggctgaaaacgggttgggtcag
cagaaggaagtctgcttgaagtcggtggtgaactcgtgctctgactgcatcaaagctgga
ccgtactgctcgtggtgccagcagctgaacttcactcgtggagggaagcaggaaaccatc
cgctgtgacaccagagcgcagctgaaagaaaaaggctgcatggaggaacacatcctctct
ccagggaacaatatgaccgtcagtgagaatttaccactgtcttcttcatctgggggtgga
gaacctgtccagctgagtccacagaagatcagcctgaagttgcggcccggacttccaaaa
acattccaggtttccttcaagagagctgaaggttatccggtggatctgtactacctgatg
gacctttcttactccatgaaagacgatctggagaaagtgaaagggctgggagaagacctt
tttgaagctctgaataaaatcacaagagatgctcagatagggtttggtgcctttgtggat
aagacggttcttccttacaccaacaccaacaaggagaagctggagagaccctgtgagagt
aaaacagaggagtgtcaggctgccttcggctacagacacgtcctgagtctgacaaacagc
aaggagaggttcaggactgaggtttctgggcagaagatctctgggaacttggactctcca
gaggggagtctggatgctatgatgcaggctgctgtgtgtaaggacgtcatcggctggagg
aacagcagcacgcgcttaatcgtcctggctacagatgctggcttccacatggctggagat
ggaaagttagctggtattttggagcccaacgacgagggctgccacatgcagaacaacctg
tacatcaagagcaacgacatggactatccctctgtggggcagttggccaggcagctggag
aagaacaacattcagccaatctttgctgtgacacagaacatggagactgtcttcaaagaa
ctctccaaactgattccaaagtcagaggttggagttctgtcagaagactcacgaaatgtg
gttcagctgattgaaaatgcttataagaggctgacgtccaagataacgctggcccactcc
agtcttcctgaagatgtgcagatcctctacaagcctgtgtgcaaacatggagaaggagag
agtgccagtcagggtgtgtgcgaccgtgtgggagaaggagaagagatctcctttaacatc
accgtgacggcagactcgtgcatgaaggaggagaaatccttcaacatcaaactcctgggc
atcagagatactctgacggtgtccttatccacaacctgtgactgcaactgccaggacgac
accaacataaaccacgaacactgcaactggaacggcaccgtgtcctgtggcatttgcaga
tgcaataatggtttcgtaggtcagttctgcagctgtgccattggggataaagacaaagag
actctgaaacaacaatgtcaaaaagacaacggcaccgagtgtgagggtcggggagactgt
gaatgtggccgctgcagctgccacacaacagagagcggtaaaagttactacggtgaattc
tgccagtgtgtagatgagcagtgccccaagttcaacaacaaagaatgctcaggacacgga
gattgcaaatgtggaaaatgtgaatgtgaaaaaggttaccagggctctgcctgtcagtgc
aaagagtccaacgaggactgccgtcccgccggggtggcccttctgtgggagaagaaccat
gtgtgctacggcagaggagtctgtatctgtggtacatgcaattgcaacgaaggatatcag
gttcccttctgtgagaagtgcctcggatgctcagatccatgccagacccaaatgaactgc
gtcgagtgtcttggatttaattctggtgtcttggaaaagaactgcaatgagaactgcaga
ggcctttctcatcagctggtggagtccttcaacatgtccgggaagcagtgccagcagaag
gacagcgagggatgctgggtcaagttcaggctgcaggagctgttcggagtggacagatac
aaggctgagatcctgagggaaagagactgcccagagccccccaacgtcattgccatcatt
ggaggctccctcgctggggtggccctcatcggcctcctggtgctgatgctcatcaagctc
ctcatccacttgcaggacttgaaagagttccggaaatttgaaaacgaacagaagaaatcc
aaatgggcaaaggctgacaacccgctcttccagggagccaccaccaccgtggccaacccc
accttcactggagagtga
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integrated database retrieval system
