Oryzias melastigma (Indian medaka): 112154924
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Entry
112154924 CDS
T07439
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X3
KO
K15195
AF4/FMR2 family member 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112154924 (aff3)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112154924 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
112154924
NCBI-ProteinID:
XP_024141952
Ensembl:
ENSOMEG00000011755
UniProt:
A0A3B3BYP2
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All DBs
Position
LG21:complement(3361742..3384828)
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AA seq
1200 aa
AA seq
DB search
MPTVLGGKGEPSIVGFLLRCAHSQVTRGHHNSCAKDIFEDMTQSWPSQRPFGGDQGQQIL
YNSKDAKHSSTQQRQRSDVQLRMTRHPHVAPQKSMLADDLKLSSDEDDDDDTQRAIHVSA
SWDRRRAHTHGRRVRHTSSDSSGSDSSAESDSSSIYSRSPNSSPEVPPDPPSPVNTQPPC
NNKNQANRSPATQWQLDKWLQNPQKKSASTEQDSSQNFPRRLISPPAHCSPSPARSWDSN
QDYSPSQSPIPSPQFSYSHNSPLPSPGYSYCPSPSPFTSTCPSPTLSPRHSTSSSPGVCP
SPCGSPRASRSPSPSQRHPPRSPSPTLHAPPNTGRHSEPQSQNQLHPTVTSVPHRPKIRP
WISPLTTPSAKSKNNVPRPPSPQHRSKTRPKQDQEQTQSRSKAAVASSQNHTHKSKPNPS
YPGSERVSDVPKAKNSTRFEQIQANKPNLKPRPSFQQSLQQPTVAKLPPSNTGHFQSNSR
FACISSTESNCRTGLGLKPTRSKSWEAAISNPVPFSHEKVSKRKLNANAGKVDQPIQDRV
GLKNKEEKHREKHQEKQERKEKRRLAEEQLLRRRWIQSSEEEEVEEVQEPRREETVRGDN
RRKKEQPPEWKTAQAKKRVPPNAEQPRRQDISTLREGTKRRGSSEECKQLHRGPVVSVSS
PSPSPHRVSSSSSSSSSSSSDSEPEPQAPVAKVPADSTSHKRPTRKGQQGPGRSDIIRTK
SCKESSTAVPDELHQGKEKQKLYTLVPFGRSEKASHPSQRGLRNLVVQIDLCLLKRIPDS
TTDSAPKEPSSFSSHANKQGDVRKQSHESETSMKDGKRKRKLENGVSHRESKRSVPDTND
RSRQMALPPIAAGNVITETVKNGCLEEYSEEDRPTPPLSPLSPLPQSPESNKPTSKAKPA
DQHQFHTQKSRDKSKDPVVKPKSEVESVKVSKQLQPPTESSWGLAGAKVPNCETPHHAEY
YLHEAKRMKHRADAMVDKLGKAVNYIDAALSFMECGKAMEEGPLEAKSPYTMYSETVELI
RYAMKLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLNYFKASPK
GPATAPSWGDSKNTGKPQSSLTPTTKQQKQDIPGTISCPFLISIPHRIHQMAANHLNITN
SVLYSYEYWEVADNLAKENKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtcctcggtggcaaaggggaaccttccattgtcggctttctgcttcgatgc
gcacattctcaggtaacaagaggccatcacaacagctgtgccaaagacatttttgaggat
atgactcagtcctggccgtcccagcgaccctttggaggtgaccaaggccagcaaatcctt
tacaactccaaggatgcaaaacactcctccacacagcaaaggcagaggagtgacgttcag
ctccgaatgacccgtcatccccatgtggcgcctcaaaaatcgatgcttgctgatgacttg
aagctaagcagtgatgaagatgatgatgatgacactcagagggccattcatgtgtccgca
tcctgggacagacgcagagcgcacacacatggcagaagggtgagacataccagctccgac
tcttcgggttcggactccagcgccgaatcggacagcagcagcatttattcccgcagccca
aactccagcccagaagttcctcctgatcctccatcgcctgtcaacacacagccaccgtgc
aacaacaagaaccaggctaatcgttcacctgctacccagtggcagttagataaatggctt
cagaacccccagaaaaaatctgccagcactgaacaagattcatcccagaactttccaaga
cgtctgatctctcctcccgcccactgcagcccttccccagccaggtcatgggacagcaat
caagattacagccctagccaaagccctattccaagtccacagttcagttacagtcacaac
agtcccctaccaagccctggttatagttactgccctagccccagcccgttcactagcact
tgtccaagtcctactctcagtccaaggcacagcacgtcctctagcccaggtgtttgtccc
agcccatgtgggagccccagagccagcaggagccccagcccttcacaaagacatcctcca
agaagcccgagtcccactctacatgctccccctaacactggtcgacattctgagcctcaa
agtcagaaccagttacatcctacagtaacgagtgttccacacaggccaaaaattcgacca
tggatttctccattgactaccccctcagcaaagagcaaaaataacgttcctcggcctcca
tccccccagcacagatccaagacacgccctaagcaggaccaagagcagactcaaagcagg
tccaaagctgccgtagcgtcaagccagaatcacacccacaagtctaaacccaacccttct
tatccaggttcagaaagggtctccgatgtccctaaagccaaaaattcaacccgctttgag
cagatccaggctaataaacccaatctcaaacctcgcccttcattccaacagagtttacaa
caacctacagtagcaaagcttcctccaagcaacactggtcacttccagtctaactcgaga
tttgcttgtatttcaagcactgagtcaaattgtagaactggtcttggtctaaagcctact
agatccaaatcttgggaggctgcaatctccaaccctgtgcctttcagtcacgagaaagtt
tccaagagaaagctcaatgctaatgcaggaaaagtggatcaaccgatccaagacagggta
ggactcaaaaacaaggaggagaaacacagagaaaaacaccaggagaaacaggagagaaag
gaaaaaagaaggctggcagaggagcagctactgagacgccgctggattcaaagctcagaa
gaagaggaggttgaagaagtacaagaacccaggagagaggaaacagtaagaggggacaac
aggagaaagaaggagcagcctcccgaatggaaaacagctcaagccaaaaagagagtacca
ccaaacgcagagcaaccccgccgtcaggacatctcaactctacgggagggaactaaaaga
agagggtcaagtgaggagtgcaagcaactacatcgtggcccagtggtatctgtctcttct
ccttctccaagtccccacagagtgtcttcctcctcatcgtcctcctcttcttcaagttca
gactcagagcctgaaccacaagctccagttgccaaagtaccagcagactccacctctcac
aagagacccaccaggaaagggcaacaaggcccaggcaggtctgacatcatcaggacaaag
tcctgtaaagagtctagcacagctgttcctgatgagctccaccagggcaaagagaagcaa
aaactctatactctggtcccatttgggcggtctgaaaaggcatctcacccctcgcaacga
ggcctgcgaaatctagtggtccagattgacctctgtcttctgaaaaggattcctgacagc
actacagactcagctccgaaggaaccctcctccttttcatcacatgccaacaagcaagga
gacgttaggaaacaatcacatgaatctgagacttccatgaaggacggcaaaaggaaacgc
aagttggagaatggtgtgtcacacagagaaagcaagaggagcgttcctgacacaaatgac
agatcaaggcagatggcgttgcccccaattgctgctggaaacgtgatcactgagactgtg
aaaaatggatgcttggaggagtactctgaagaagaccgaccaacgcctcctttatctcct
ttgtctcctctacctcaaagccctgaatcaaacaagcctacctccaaagcgaagcctgct
gaccagcatcagttccatacccagaagagcagagacaagagtaaagatccagtagtaaag
cccaagtcagaggtggagagtgtgaaggtctcaaagcagctccaaccgccgacagagtca
tcctggggcctggccggtgccaaagtgccaaactgtgagactcctcaccatgctgagtac
tacttacacgaggctaaaaggatgaagcaccgagctgatgccatggttgataagctagga
aaagctgtgaactacattgatgcggcgctgtccttcatggaatgtgggaaagcgatggag
gaagggcctctagaagcaaagtctccgtacaccatgtactctgaaacagtggagctgatc
aggtacgcgatgaagctgaagagccattcaggtcctggagcgagacaggaagacaagcag
ctggcggttttgtgtttcagatgcctggcgctcctttattggcagatgtttcgtttaaag
aaggatcacgcactgaaatattccaaagtgctgctcaactattttaaggcttctcccaaa
gggcctgcaacagcaccctcttggggcgactctaaaaacactgggaaaccccaatcctcc
ctcacaccaaccacaaaacaacaaaagcaggacatccctggaacaatcagctgtccgttt
ctcataagcattccccaccgcatccaccagatggcagcaaatcatctgaatataaccaac
agtgtcctgtacagctatgagtactgggaggtagcagataatcttgccaaggaaaataaa
gagttcttcaactacttgaatactttatctgggccgctgactcttcacagcagcattgct
catgctgtccaatacaccagacaagctcttcagtggattcgcattagtgccaaactgaac
tga
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