KEGG   Oryzias melastigma (Indian medaka): 112154954
Entry
112154954         CDS       T07439                                 
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
  KO
K04683  transcription factor Dp-1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03083  Polycomb repressive complex
oml04110  Cell cycle
oml04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112154954 (tfdp1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    112154954 (tfdp1a)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112154954 (tfdp1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112154954 (tfdp1a)
   03036 Chromosome and associated proteins [BR:oml03036]
    112154954 (tfdp1a)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    112154954 (tfdp1a)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112154954 (tfdp1a)
SSDB
Motif
Pfam: DP E2F_TDP alpha-hel2 Imm44
Other DBs
NCBI-GeneID: 112154954
NCBI-ProteinID: XP_024142008
Ensembl: ENSOMEG00000010606
LinkDB
Position
LG21:2657362..2674460
AA seq 413 aa
MAKDAGLIETNGELKVFIDQNLSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNVAAH
MQHLPHMVIGTPQRPSVSNTILVNSPHTPSSQFLTQTQTADASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSADNHMSPIDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNKQSEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDDEEYDENDDED
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggctaaagatgctggtctgattgaaacgaatggagagttgaaggttttcattgatcag
aatttgagccccagcaaaggcgtcctgtccttggttacagtccagccaacagctgcccct
gtggccaaacagctactacccaaaacacttgggccttcaaatgtgaatgttgcagcacat
atgcaacacctgccacacatggtgattggaacgcctcagagaccgtcagtatcaaacaca
atcttggtgaacagtccgcacacacccagctcccagttcctcactcagactcagacagca
gatgcctctccttggtcatcaggaaagcgtggtaagaaaggagaaaagaacggaaaaggc
ctgaggcatttctccatgaaagtgtgtgagaaagtgcagaagaagggagtaactacctac
aatgaagtggcagatgaactagttgctgagttcagctccgcagataaccacatgtcaccc
attgactcgcatgtatacgaccaaaagaatattcggcggcgtgtttatgatgcactgaac
gtgctcatggccatgaacatcatctcaaaagagaaaaaggaaatcaaatggattggtttg
cccaccaactccgcacaagagtgtcaaaatttagaggtggagagacaacggcggttggag
aggattaagcagaaacagtcacagcttcaggagctcattctgcagcaaatagcttttaag
aacctcgttcagaggaacaaacagtcggagcagcaagcaaacagacctccaccccctaac
tcaatcatccaccttcctttcatcatcgtcaacaccagcaagaagacggtcatcgactgc
agcatctccaatgacaagttcgagtatttgttcaattttgacagcatgtttgagatccac
gatgacatcgaggtgctgaagcgtatgggcatggcctgcggtttagaagtgggaaagtgt
tccccagaggacctgaaggttgcccgtagcctggtgcccaaagctcttgagccttacgtt
atagagatggccaaaggccccatcagtaacgtgtacatcactggaggctcctctgccaac
ggagcgcgttaccccgccagcagtgacggctgcaccgacggcaccatggcctccagctcc
aacgactctcactacagcggctcccgcgtggagaccccagtgtcttacatgggcgacgac
gacgacgatgaggagtacgacgagaacgacgatgaagactaa

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