Oryzias melastigma (Indian medaka): 112154954
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Entry
112154954 CDS
T07439
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
oml04110
Cell cycle
oml04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112154954 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112154954 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112154954 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112154954 (tfdp1a)
03036 Chromosome and associated proteins [BR:
oml03036
]
112154954 (tfdp1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
112154954 (tfdp1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112154954 (tfdp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Imm44
Motif
Other DBs
NCBI-GeneID:
112154954
NCBI-ProteinID:
XP_024142008
Ensembl:
ENSOMEG00000010606
LinkDB
All DBs
Position
LG21:2657362..2674460
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AA seq
413 aa
AA seq
DB search
MAKDAGLIETNGELKVFIDQNLSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNVAAH
MQHLPHMVIGTPQRPSVSNTILVNSPHTPSSQFLTQTQTADASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSADNHMSPIDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNKQSEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDDEEYDENDDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctgattgaaacgaatggagagttgaaggttttcattgatcag
aatttgagccccagcaaaggcgtcctgtccttggttacagtccagccaacagctgcccct
gtggccaaacagctactacccaaaacacttgggccttcaaatgtgaatgttgcagcacat
atgcaacacctgccacacatggtgattggaacgcctcagagaccgtcagtatcaaacaca
atcttggtgaacagtccgcacacacccagctcccagttcctcactcagactcagacagca
gatgcctctccttggtcatcaggaaagcgtggtaagaaaggagaaaagaacggaaaaggc
ctgaggcatttctccatgaaagtgtgtgagaaagtgcagaagaagggagtaactacctac
aatgaagtggcagatgaactagttgctgagttcagctccgcagataaccacatgtcaccc
attgactcgcatgtatacgaccaaaagaatattcggcggcgtgtttatgatgcactgaac
gtgctcatggccatgaacatcatctcaaaagagaaaaaggaaatcaaatggattggtttg
cccaccaactccgcacaagagtgtcaaaatttagaggtggagagacaacggcggttggag
aggattaagcagaaacagtcacagcttcaggagctcattctgcagcaaatagcttttaag
aacctcgttcagaggaacaaacagtcggagcagcaagcaaacagacctccaccccctaac
tcaatcatccaccttcctttcatcatcgtcaacaccagcaagaagacggtcatcgactgc
agcatctccaatgacaagttcgagtatttgttcaattttgacagcatgtttgagatccac
gatgacatcgaggtgctgaagcgtatgggcatggcctgcggtttagaagtgggaaagtgt
tccccagaggacctgaaggttgcccgtagcctggtgcccaaagctcttgagccttacgtt
atagagatggccaaaggccccatcagtaacgtgtacatcactggaggctcctctgccaac
ggagcgcgttaccccgccagcagtgacggctgcaccgacggcaccatggcctccagctcc
aacgactctcactacagcggctcccgcgtggagaccccagtgtcttacatgggcgacgac
gacgacgatgaggagtacgacgagaacgacgatgaagactaa
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