Oryzias melastigma (Indian medaka): 112154958
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Entry
112154958 CDS
T07439
Symbol
ofd1
Name
(RefSeq) oral-facial-digital syndrome 1 protein homolog isoform X1
KO
K16480
oral-facial-digital syndrome 1 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112154958 (ofd1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112154958 (ofd1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112154958 (ofd1)
Pericentriolar materials (PCM)
Centriolar satellite
112154958 (ofd1)
Centrosome duplication proteins
Centriole replication proteins
112154958 (ofd1)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112154958 (ofd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH_2
FOP_dimer
LisH
Motif
Other DBs
NCBI-GeneID:
112154958
NCBI-ProteinID:
XP_024142015
Ensembl:
ENSOMEG00000006906
UniProt:
A0A3B3D7W9
LinkDB
All DBs
Position
LG21:20802690..20812492
Genome browser
AA seq
1038 aa
AA seq
DB search
MSASKQDEAFSPEELRKRLYQTFKSKGVLDSLKAQLRNQLIQELKHPPLTGQAPVPRLVP
LKTDSAIASGCNSIIADHLQASGYEYTLSVFYPESGLSKDKVLKKDDLLQFLKINPESSL
YKSLAYKENNKGFLFSLLTHLTSHNAPSPRHNADAQTTTNYGESLVEKMKTIDKEYEHFN
KDQMFSFQSKLAAYKREVEAQMEAAMNAKLHHFKDVEISKVRLEEKSKFHKEFDNLKRDL
ERNYEMKAKALMEREKNAIEGLQKQKEIEDKDMYMQRQSTLKEIETLRNRENELRMRMEA
FEKTCQIHAEKVKTTEELMRRRELAVKTMEDTYEQKLKNELSRYQLELKEEFIKRTEKLT
ENESRNKVETARIQQESAAVDAQLEEHSRTCAKLKQLQAELDTAQQQISLLTQQKDLLRE
RVESTSDYPSLRRERTELQGQTQLLKKQLEDIREENRRLHAEMATPSKEELALQVELQRL
QSARRLDEEEFDNQRQVLQAQLQNELDRSAQLRAELLDHQERSQRMSIYVEELKMKLQHT
QQALENEVLRNPKPSLVDRSVLELSPDKLVPPDIYVDRGLLGATPGYRNHWKAGRTSQGH
KTSWCDSHDPDMELVTDAKTRIQELQEEAESLEEAYRIHQQRAVHSLSRRTSPKPFLLKQ
ARPSHHNSTHTGQQDSHHSHQSKSPFSPLSPQRVQPPILVFDDPGSFAPAGDPRLTSSDD
YDQLHRAAHTHQSLAEPLFIRTEPAQDESVVSSEHSSTRKKRHRKSAEEAVVSPAASPQL
LSDGSIKQAATSAAADFSPEISPPRSPQLKSTVREQSSPLESKPVFSSSESSPQPEKIKL
EDLTEILESSHIPELLLDTAGPLSEKAPDGPSTPHPQDLPEDRGDSEAPEGSPNTPQTSS
ESVRVQEEDVEEQRWEKERKERQEKRERELEEAKEREQQELEELERLEKETLLQKVEQPE
EEEEESEEDDRQKKEEMKDENPLEKYMKMVLEARGKQREESPHREEAGQTSPENISFNDD
TERSAALNSPKEEEDDFW
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtccaaacaagacgaggcgttttccccagaggaactcagaaaaagactgtac
caaaccttcaaaagcaaaggcgttctcgattccctcaaagcgcagctgcggaatcagctc
atccaggagttgaagcatccaccgttaacgggacaggcaccggttcccaggctggtcccc
ctgaagactgattctgcaatagcttcaggctgtaacagcatcatagctgatcacctccaa
gcatcaggttatgagtacacgctttctgtgttctaccctgaaagcggtttaagtaaagac
aaggttttaaagaaagatgacctccttcagtttctcaagattaaccctgagtcatcactg
tacaaatctttggcatataaagaaaacaacaaaggcttcctcttcagccttttgacacat
ctgacatcccataatgctcccagtccacgccacaatgcagatgctcagacgaccacaaac
tacggcgaatctcttgtggagaagatgaagacgattgataaggaatatgaacatttcaat
aaggaccaaatgttttcatttcaatccaaacttgctgcatataagagagaagttgaggca
cagatggaggctgcaatgaatgcaaagctgcatcattttaaagacgttgaaatatctaag
gtgaggctggaagaaaagtcaaaattccataaggaatttgataacctgaagcgagacctg
gagagaaactatgaaatgaaggcaaaagcattgatggagagagaaaagaacgccattgag
ggcttgcaaaagcagaaagagattgaagataaagacatgtacatgcagagacagtccacg
ctgaaagaaatcgaaaccctccgtaacagagaaaatgaactgaggatgagaatggaagca
tttgaaaagacgtgtcagattcatgctgagaaagtcaagaccactgaagagctcatgagg
aggagagaactggctgtgaaaaccatggaggacacgtatgagcaaaagctgaaaaatgaa
ctatccaggtatcagcttgagttgaaggaagagttcatcaaaagaacagaaaaactcaca
gaaaacgagagcagaaacaaagttgaaacagctcgaatccagcaggaatccgctgcagtt
gatgcccaattagaagaacacagcagaacgtgtgccaaactgaaacagctgcaggccgag
cttgacacggcacagcagcagatctccctgctgactcagcagaaagacttgttgagggaa
cgagtggagagcacaagcgactaccccagtttgaggagagaaagaacagagctgcagggg
cagacgcagctgctgaaaaagcagctggaagacatcagagaggagaaccgccgtctccat
gcagaaatggccacgccatctaaagaggagctggctctgcaggtggagctgcagcgcctg
cagagcgcccgcagactggatgaggaagagtttgacaaccagaggcaggtgctgcaggcc
cagcttcaaaatgagttggaccgctctgctcagctcagagctgagctcttggatcaccag
gagagatcccaaaggatgagtatttatgttgaagagctgaagatgaagcttcaacacact
cagcaagctcttgaaaatgaagtgctgcgtaaccccaagccgtctcttgttgaccgctca
gtgttggagctcagccccgacaagctggttccccctgatatctacgtggacagaggtctg
ctgggggccacgccgggctatcgcaatcactggaaagcaggcaggacctcgcaaggacac
aagacatcctggtgtgattctcacgaccccgacatggagctggtgaccgacgccaagact
cggatccaagagctgcaggaggaggccgagagcctggaggaggcgtacaggattcaccag
cagagggcagtgcactccctctcacgcagaacctccccaaaaccctttttactaaagcag
gcacgtccctcacatcacaacagcacccatacagggcaacaagactcgcaccattcacac
caatcaaagtccccatttagtccactctctcctcaaagagtccagccccccattctggta
tttgatgacccaggaagctttgcacccgctggagacccaaggctgacttcatcagacgac
tatgaccagctccacagagctgctcacactcaccagtctttggctgagcccttatttatc
agaacagaaccagctcaggatgaaagcgtggtttcatcagagcactcatccaccaggaag
aagcgtcacagaaaaagtgcagaagaggcggtcgtgtctccggctgcgtcccctcagctg
ctcagtgacggatccatcaaacaggccgccacctccgccgctgccgacttctctcccgag
atcagccctcctcgcagtccccagctcaagagcacggtgcgagagcagtccagtcctttg
gagtcgaagccggtgttctccagctcggagtcgtccccacagccagagaagatcaagctt
gaagatcttacagaaatccttgagtccagccacattccagagcttctcctggacactgct
ggccctctctctgagaaggcccccgatggcccctccaccccccacccacaggacctccca
gaggaccgaggcgactctgaggctccagagggttccccaaacacgccacaaacatcgagt
gagtctgtcagagtccaagaggaagatgttgaggagcagaggtgggaaaaagagcgcaaa
gaaagacaagaaaaacgagagagggagctggaagaagccaaggagcgagagcaacaagaa
ctggaggaactggagaggctagagaaagagacgcttttgcagaaagtagagcaaccagaa
gaggaggaagaagaaagtgaagaggatgataggcagaagaaagaggagatgaaagatgaa
aatccactagagaagtacatgaagatggtcctggaagcaagagggaagcagcgtgaagag
agtcctcatagagaggaggcgggacaaacaagcccagaaaacattagttttaatgacgac
acagaacgaagtgctgcattaaattcacccaaagaagaggaagatgacttctggtga
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