KEGG   Oryzias melastigma (Indian medaka): 112155001
Entry
112155001         CDS       T07439                                 
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin isoform X3
  KO
K16464  centrosomal protein CEP250
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112155001 (si:dkey-230p4.1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oml03037]
    112155001 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    112155001 (si:dkey-230p4.1)
Cilium and associated proteins [BR:oml03037]
 Other cilia and associated proteins
  Other cilium assembly proteins
   112155001 (si:dkey-230p4.1)
SSDB
Motif
Pfam: Rootletin ATG16 DUF1664
Other DBs
NCBI-GeneID: 112155001
NCBI-ProteinID: XP_024142105
Ensembl: ENSOMEG00000011252
LinkDB
Position
LG21:complement(23645114..23659371)
AA seq 2134 aa
MESEVLIGWQQQKEELEREVCHLQEELAESRAEREELESRTRALQDRLRQTIHPSLGLSL
EEEEEQRRWKKKLREGREREARQALLIHRLQNKVLEYRDQCQRLDLQLQDERRKTLHMER
VRDEHSDSLESALIRLEEEQHRLISLADTNSLLREQLSQSEQSNQALKEELHKLTADWIR
STEKAEQRETDWQREKKGQLGHAGQQQNHLLSVWRSVVALKRHCHSVKTAADRDLWELRA
EFSRLSSTLLSNCDSVYSTMSLATLHKSSALLPPPPSSPPPLSSTMILPPLPPPPDSCST
QGSFSIGELEVKEEEKLHEKTEALQQRTVELARSLQDEREEKERVMERHQETTRRLQSVS
QAVIRLSRVVSSRSRPASSSPDDVLRADLSSMLSVLSQAESVLLRRSEELQGAELNLRRL
SESRSGLQLQLKQLQDVHQQLLVRSQHTQQELTHTHSVLCSEKEVSSSLRLQLEEVQRRE
EEVKRENLRLRRERDREEEKNLQLETDSHRRVEAELLESVQVTEREHLHQMELLSLKGAL
EREQLDRQKAEKEAADSRDALQECRGSVLRLSSLESLLRRDLEESRDALKKVSALNSALA
SDKRALNQQLLQLEGKLSESQSQLQAASSELTCLQRDVRTLRGQTDQDADIIRQLKEQQV
EAVKNSEGKERELLLLEEDRTSGEQQLEELRSQHVSLCQELKELQEELQQANQEVTMRNE
QQEEQQRESRRLQEELQSERRHQAQLEEELHELRSLSVSQQLQLSQQQQLLSQAEVDRCQ
LSTRLHALQEAKLTLQGEIKCLRGELQRETASRERSEDEKEALQEDVQRLTEEVQELRRR
AEEEEEKKMCHKERETLREELRVRDGELDALKRRTERIEEELEERRQQVERLKEEVTQRG
TQVSLLNERIVNLEEEKEILQDEARSTEVRLQEEEEKRREEEVQRDGETEALCDRIEKLE
REKDEIEKEVQQLKSKAQEQEERWRSNDKEQQNEINRLRGENSSLQEHRKSEKRQIEKLQ
HEKMEVLERLQERVGEVELMKVKLNVAQEEREEMVEEVQKRERSLEKQMCAVREREEEME
RLKERLKLAKEREEETERELQETVDKLKKKEAREEQLEVLLKENRELLEQEEREREVRED
RISSLIKELQEAHAVSQIAKRRSTEKQEAHDRLQEEVEDWQEQAEQSLKQVAKLKEALKG
RNEEVSQLKVMLKEKEEEWKEQEAQSKMDKERRRKLENKLVEVEEDITRLEKKVRLIQAE
RDKDREEVKKLKDNLGKSENKEREQGERMRRMEEEKMMLSSNLREIEEELKAEKEQTRRV
RKERSSLEDKLKEKEREIDECRDLVRSKEEKFQEAKEMDRKMLENEKNRHLLLEEKGETR
VKELEEEKEDLLLKLMKKEKEVTELQEEVQSTREELDKKKEEVYNVKRECEEAQESLKSL
KRKMISLQEEVNQKQKENEEAQEKLKSLKREVMFLQEEVKQKQKAHEEAQEKLKSLTKEV
MFLQEEVKEKQEAHEEAQEKMTVLKEEVHQKHLTEENEWRAKDMMNRNEAQELQRKIDEA
QEELERSNKEIYTLKEELEKEQREKKDIHDELIKRSEEVASLREKIKEELSRTKEEEEEE
TEKPTRETIELATLKEELHKEQREKLETLEELKKRREDVTVLKGEVTKECMQKEEVQEEL
RSVQRSLEQKSQSLSSLQSQVTDLRLSKDRVEEEKQQMKGGLQVVLKEMNLLKVLLQESH
AEGELLRSTLEERKKEVGRIRQENLQMEERQEELEELRARVKALEKRRTEMAEELDKADE
RRREAEEWWRSKMKEVEQEKGMMQSTLDAEIQTLTQNHEELLKESRSKLQDSLRELEEAR
VELSRNRAVMEEQKTRITLLIADREESGEQRRRRDSQEERGEGKQEEIRRQLQQTEAQVD
SLTLRVQELQEDRNRLRLALEQTEAELIKHPSQQEQSQGAGLSPEETVGGRLEVLQRLVA
ELELEQKRLQKKNSNLEKQKDRLKKDRDVLRDILRQVELERGRLSQQLTDSTESQVGQVC
AHATEEDRLRSKVKELEDQVSQLRLSLAVDQQQKAEFIQQSSRNSQWLLSLRRDLNDSLS
AVTRRPIPSVLESETQRLDRSLREEELRLSFSRS
NT seq 6405 nt   +upstreamnt  +downstreamnt
atggagtctgaggtgctgattggctggcagcagcagaaggaggagctcgagcgggaggtg
tgccatctgcaggaggagctggcagagagccgtgcggagcgggaggagttggagtccagg
accagagctctccaggacaggctccgtcagaccatacatccctctctgggcctgtcactt
gaggaggaggaggagcagaggaggtggaagaagaagctgagggagggcagagagagagag
gccaggcaggcgctgctgatacatcggctgcagaataaggttctggagtacagagatcag
tgccagcgtttggacctgcagctgcaggacgaacggaggaagacactccacatggagagg
gtcagagatgagcatagcgactccctggagagcgccctcatcaggctggaggaggagcag
cacaggctgataagtctggctgacaccaactctcttctgcgggagcagctcagccaatca
gagcagtccaaccaggcgctcaaggaagagctccacaaactgacagctgattggatcaga
tccacagagaaggcggagcaaagagaaaccgattggcagagagagaaaaagggtcagctg
ggtcacgcgggtcagcagcagaaccacttgctgtcagtttggagatccgtggtggctctg
aagagacactgtcacagtgtaaaaacagctgccgacagagacctgtgggagctccgggcc
gagttttcccgcctctcctcaacgctgctctccaactgtgactccgtctactccaccatg
agcctcgctactcttcacaaatcttcagctttgcttcctccaccaccatccagtcctcct
cccttgtcctcaaccatgatcctccctcctcttcctcctcctccagactcctgctccact
cagggatccttctccataggggagctagaggtcaaagaggaagagaaacttcatgaaaag
acagaagctttgcagcagaggacagtggagctcgctcgctcacttcaggatgagagagag
gagaaggagagagtgatggagagacatcaagaaactacgaggaggctgcagtcggtcagt
caggcggtgatcagactgtccagagtcgtcagcagcagaagtcgtccagcgagctcctcc
ccagacgatgttctccgcgctgacctgtcctccatgctgtctgtcctctcccaggctgaa
agcgtcctgctgaggaggagcgaggagctgcagggggcggagctaaacctgcggcggctc
agtgagtcgaggagcggcctgcagctgcagctgaagcagcttcaggacgtccaccagcag
cttctcgttcgctcacaacacacacagcaggagctgacgcacacacacagcgtcctctgc
agcgagaaggaggtgtcgagctccctacgcctgcagctggaggaggtgcaaagaagagag
gaagaggtgaagagggagaacctcagactgaggagagaaagagacagagaggaggagaag
aacctgcagctggagacggactcacaccggcgggtggaggcggagctcctggagagtgtc
caggtgacggagagagaacatctgcaccagatggagctcctcagtctgaagggggcgctg
gagagagaacagctggacaggcagaaagcagagaaggaggctgcagactccagggacgcc
ctgcaggagtgccgtggaagcgtgctccgcctctcgtccttggaaagcctgctgaggcgg
gacctggaggagagtcgagacgctctgaagaaggtttctgctcttaactctgctctggcg
tcagacaagagggcgttgaaccagcagctgctgcagctggaaggcaaactgtcagagagc
cagtcgcagctgcaggctgcgagttcagagcttacctgtctgcagagagacgtcagaacg
ctcagagggcagacggaccaggatgccgacatcatccgtcagctgaaagagcagcaggtg
gaggctgtgaagaactcagagggaaaggagagggagctgctcctactggaggaggacaga
acaagtggcgaacaacagctagaggagcttcgctctcagcatgtctcgctgtgccaggag
ctaaaagagttgcaggaggagctgcagcaggcgaaccaagaggtcacgatgagaaacgag
cagcaggaggagcagcagagagagagcaggaggctgcaggaggagctccagagtgagcgt
agacaccaggcgcagctggaggaggagctacatgagctcaggtctctgtcggtgtcgcag
cagctgcagctcagccagcagcagcagctgctctctcaggctgaggtggaccgctgtcag
ctgagcacgcgcctccatgcgctgcaggaggccaagctcaccttacagggtgagatcaag
tgtctgagaggagaactccagagagagaccgccagcagagagagaagcgaggacgagaag
gaggcgctgcaggaagacgtgcagagactgacggaggaggtgcaggagctgaggaggagg
gcagaggaagaagaggagaagaagatgtgccacaaagaacgagagacactgagggaggag
ttaagagtaagagacggggagctggacgccctgaagagacgcactgagaggatagaggag
gagctggaagaaaggagacaacaggtggagagactgaaggaggaggtgacacaacgaggt
acccaagtcagcctccttaacgagagaatagtgaatttagaagaagaaaaggagatactg
caggatgaggcaaggagtactgaggtcagactgcaggaggaggaggagaaacggagggag
gaggaggtgcagagagacggggagactgaagctctctgtgacagaatagagaaattagaa
agagagaaggatgaaatagaaaaggaggtacagcagctgaagagtaaagcgcaggagcaa
gaggagagatggaggtcaaacgataaggagcaacagaacgagataaacagactgagagga
gaaaactcctccctccaggagcacagaaagtcagagaagcgacaaatagagaaactgcaa
catgaaaaaatggaggttctggagaggctacaagagagagttggagaggtggaactgatg
aaggtaaaactaaatgtggctcaggaggagagggaggagatggtggaggaggtgcagaaa
agggagcgcagcctggagaaacagatgtgtgcagtgcgagaaagggaggaggaaatggag
agattgaaggagcggctgaagttggcgaaggagcgggaggaggaaacggagagggagctc
caggaaactgttgacaaactgaagaaaaaggaggcgagggaggaacagctggaggtgctg
ctcaaagagaacagggagcttttggagcaggaggaaagagagcgagaagtaagagaagac
aggatctcctccttgatcaaagaattgcaggaggcgcatgctgtgagtcagatagcaaag
aggagaagcaccgaaaagcaggaggcccatgacagactgcaggaggaggtggaggactgg
caggagcaggcagagcaaagtctgaagcaggtggcaaagctcaaagaagccctgaagggg
agaaatgaggaggtgagccagctgaaggtaatgcttaaagaaaaagaagaggagtggaaa
gagcaggaggcgcagagcaaaatggacaaggaaaggaggagaaagctggagaacaagctg
gtggaggtggaggaggacatcaccaggttagagaagaaagtgagactgatacaggcggag
agggataaagatagggaggaggtgaagaagttgaaggacaacctgggaaaaagtgaaaac
aaagagagggagcaaggagaaagaatgaggagaatggaagaggagaagatgatgttgagt
agcaatttgagagagatagaggaggagctaaaagcagaaaaagagcaaacgcggagagta
aggaaagagaggagcagtctggaggacaaactaaaagaaaaagagagagaaatagatgag
tgtagggatttggtgagaagtaaggaggagaaatttcaggaggcgaaagagatggatcgg
aaaatgttggagaatgaaaagaatcggcatctgctgttggaggagaagggggagaccagg
gttaaagagcttgaggaggagaaggaggaccttttactgaagttaatgaaaaaggaaaaa
gaagtgacagaactccaagaggaggtgcagagcacgagggaggaattggataaaaagaaa
gaggaggtatataatgtaaaaagggaatgtgaggaggcgcaggaaagtctaaaatcattg
aagaggaaaatgatttcgctccaagaggaggtgaatcagaagcaaaaagagaatgaggag
gcccaggagaagctaaaatcactgaagagggaagtgatgtttctccaagaggaggtgaaa
caaaagcaaaaggcacacgaggaggcacaggagaagctaaaatcacttacaaaggaagtg
atgtttctccaagaggaggtgaaagaaaagcaagaagcacacgaggaggcgcaggagaag
atgacagtgctaaaggaggaggtgcatcagaaacatttaacagaagagaacgagtggaga
gcaaaggatatgatgaacagaaatgaagctcaggagctacagaggaaaatagatgaggca
caggaggagctggagaggagcaacaaggagatctacacacttaaagaggagctagaaaag
gaacaaagagagaaaaaggacattcatgatgagctgataaagaggagtgaagaggttgca
tcgctaagagagaaaataaaagaggagctcagcaggaccaaagaggaggaggaggaggag
acagaaaaaccgacaagagagacgattgagttggccactctaaaggaggagctgcacaag
gaacagagggagaaactggagactctggaggagctgaagaagaggagagaggatgtcact
gtgcttaaaggagaagtgacgaaggagtgcatgcagaaggaggaggtgcaggaggagcta
agaagtgtgcagcgcagcttggagcagaagtctcagagtctgagctcccttcagagtcag
gtgacggatctgagactcagcaaggatcgagtcgaggaggagaagcagcaaatgaaagga
ggcctgcaggtggtgctgaaggagatgaacttgctgaaggttctcctgcaggaaagccat
gcagaaggagaactgctgaggagcaccctggaggagaggaagaaggaggtggggagaatt
agacaggagaacctgcagatggaagagaggcaggaggagctggaggagctgagagccaga
gtcaaagccctggagaaaaggaggacggagatggctgaggagctggataaggctgatgag
aggaggagggaggctgaggagtggtggaggagcaaaatgaaggaagtagaacaggagaaa
gggatgatgcaaagcactctggacgcagaaatacagacgctgacgcagaaccacgaggag
ctgctgaaggagtcgaggtccaagcttcaggacagtttgagggagcttgaggaggcgagg
gtcgagctcagccggaacagagccgtgatggaggagcagaaaactcggatcactctcctg
attgcagacagagaggagtcgggggagcagaggaggaggagggacagccaagaagaaaga
ggagaggggaagcaggaggagatcaggaggcagctccagcagacggaggctcaggtggac
agtttgactctgagggtccaggagctgcaggaggacagaaatcgactccgattggctctg
gaacaaacagaggcggagctgataaaacacccctcccagcaggaacagagccagggggcg
gggcttagcccagaagagactgtagggggcagactggaggtcctgcagcggctggtggct
gagctggagctggaacagaaacgactgcagaagaagaactccaatctagagaagcaaaaa
gacaggctgaagaaagacagagatgttctgagagacatcctgagacaggtggagctggag
cgagggaggctcagccagcagctgacagacagcacagagtctcaggtgggacaggtgtgc
gcacatgctacagaagaagatcgtctgcgcagtaaagtgaaggagctggaagaccaggtg
agtcagcttcgtctgtctttggccgtggaccagcagcagaaggcggagtttatccagcag
tcatccagaaacagccaatggctgctctccttaagacgggacctcaacgattcgctgtct
gcggtcactcgccgtccaatcccgtccgtcctggagtccgagacgcagcggttggaccgc
agcctgagggaggaggagcttagactttcctttagccgatcgtga

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