Oryzias melastigma (Indian medaka): 112155001
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Entry
112155001 CDS
T07439
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin isoform X3
KO
K16464
centrosomal protein CEP250
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112155001 (si:dkey-230p4.1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112155001 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112155001 (si:dkey-230p4.1)
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Other cilium assembly proteins
112155001 (si:dkey-230p4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
DUF1664
Motif
Other DBs
NCBI-GeneID:
112155001
NCBI-ProteinID:
XP_024142105
Ensembl:
ENSOMEG00000011252
LinkDB
All DBs
Position
LG21:complement(23645114..23659371)
Genome browser
AA seq
2134 aa
AA seq
DB search
MESEVLIGWQQQKEELEREVCHLQEELAESRAEREELESRTRALQDRLRQTIHPSLGLSL
EEEEEQRRWKKKLREGREREARQALLIHRLQNKVLEYRDQCQRLDLQLQDERRKTLHMER
VRDEHSDSLESALIRLEEEQHRLISLADTNSLLREQLSQSEQSNQALKEELHKLTADWIR
STEKAEQRETDWQREKKGQLGHAGQQQNHLLSVWRSVVALKRHCHSVKTAADRDLWELRA
EFSRLSSTLLSNCDSVYSTMSLATLHKSSALLPPPPSSPPPLSSTMILPPLPPPPDSCST
QGSFSIGELEVKEEEKLHEKTEALQQRTVELARSLQDEREEKERVMERHQETTRRLQSVS
QAVIRLSRVVSSRSRPASSSPDDVLRADLSSMLSVLSQAESVLLRRSEELQGAELNLRRL
SESRSGLQLQLKQLQDVHQQLLVRSQHTQQELTHTHSVLCSEKEVSSSLRLQLEEVQRRE
EEVKRENLRLRRERDREEEKNLQLETDSHRRVEAELLESVQVTEREHLHQMELLSLKGAL
EREQLDRQKAEKEAADSRDALQECRGSVLRLSSLESLLRRDLEESRDALKKVSALNSALA
SDKRALNQQLLQLEGKLSESQSQLQAASSELTCLQRDVRTLRGQTDQDADIIRQLKEQQV
EAVKNSEGKERELLLLEEDRTSGEQQLEELRSQHVSLCQELKELQEELQQANQEVTMRNE
QQEEQQRESRRLQEELQSERRHQAQLEEELHELRSLSVSQQLQLSQQQQLLSQAEVDRCQ
LSTRLHALQEAKLTLQGEIKCLRGELQRETASRERSEDEKEALQEDVQRLTEEVQELRRR
AEEEEEKKMCHKERETLREELRVRDGELDALKRRTERIEEELEERRQQVERLKEEVTQRG
TQVSLLNERIVNLEEEKEILQDEARSTEVRLQEEEEKRREEEVQRDGETEALCDRIEKLE
REKDEIEKEVQQLKSKAQEQEERWRSNDKEQQNEINRLRGENSSLQEHRKSEKRQIEKLQ
HEKMEVLERLQERVGEVELMKVKLNVAQEEREEMVEEVQKRERSLEKQMCAVREREEEME
RLKERLKLAKEREEETERELQETVDKLKKKEAREEQLEVLLKENRELLEQEEREREVRED
RISSLIKELQEAHAVSQIAKRRSTEKQEAHDRLQEEVEDWQEQAEQSLKQVAKLKEALKG
RNEEVSQLKVMLKEKEEEWKEQEAQSKMDKERRRKLENKLVEVEEDITRLEKKVRLIQAE
RDKDREEVKKLKDNLGKSENKEREQGERMRRMEEEKMMLSSNLREIEEELKAEKEQTRRV
RKERSSLEDKLKEKEREIDECRDLVRSKEEKFQEAKEMDRKMLENEKNRHLLLEEKGETR
VKELEEEKEDLLLKLMKKEKEVTELQEEVQSTREELDKKKEEVYNVKRECEEAQESLKSL
KRKMISLQEEVNQKQKENEEAQEKLKSLKREVMFLQEEVKQKQKAHEEAQEKLKSLTKEV
MFLQEEVKEKQEAHEEAQEKMTVLKEEVHQKHLTEENEWRAKDMMNRNEAQELQRKIDEA
QEELERSNKEIYTLKEELEKEQREKKDIHDELIKRSEEVASLREKIKEELSRTKEEEEEE
TEKPTRETIELATLKEELHKEQREKLETLEELKKRREDVTVLKGEVTKECMQKEEVQEEL
RSVQRSLEQKSQSLSSLQSQVTDLRLSKDRVEEEKQQMKGGLQVVLKEMNLLKVLLQESH
AEGELLRSTLEERKKEVGRIRQENLQMEERQEELEELRARVKALEKRRTEMAEELDKADE
RRREAEEWWRSKMKEVEQEKGMMQSTLDAEIQTLTQNHEELLKESRSKLQDSLRELEEAR
VELSRNRAVMEEQKTRITLLIADREESGEQRRRRDSQEERGEGKQEEIRRQLQQTEAQVD
SLTLRVQELQEDRNRLRLALEQTEAELIKHPSQQEQSQGAGLSPEETVGGRLEVLQRLVA
ELELEQKRLQKKNSNLEKQKDRLKKDRDVLRDILRQVELERGRLSQQLTDSTESQVGQVC
AHATEEDRLRSKVKELEDQVSQLRLSLAVDQQQKAEFIQQSSRNSQWLLSLRRDLNDSLS
AVTRRPIPSVLESETQRLDRSLREEELRLSFSRS
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaggtgctgattggctggcagcagcagaaggaggagctcgagcgggaggtg
tgccatctgcaggaggagctggcagagagccgtgcggagcgggaggagttggagtccagg
accagagctctccaggacaggctccgtcagaccatacatccctctctgggcctgtcactt
gaggaggaggaggagcagaggaggtggaagaagaagctgagggagggcagagagagagag
gccaggcaggcgctgctgatacatcggctgcagaataaggttctggagtacagagatcag
tgccagcgtttggacctgcagctgcaggacgaacggaggaagacactccacatggagagg
gtcagagatgagcatagcgactccctggagagcgccctcatcaggctggaggaggagcag
cacaggctgataagtctggctgacaccaactctcttctgcgggagcagctcagccaatca
gagcagtccaaccaggcgctcaaggaagagctccacaaactgacagctgattggatcaga
tccacagagaaggcggagcaaagagaaaccgattggcagagagagaaaaagggtcagctg
ggtcacgcgggtcagcagcagaaccacttgctgtcagtttggagatccgtggtggctctg
aagagacactgtcacagtgtaaaaacagctgccgacagagacctgtgggagctccgggcc
gagttttcccgcctctcctcaacgctgctctccaactgtgactccgtctactccaccatg
agcctcgctactcttcacaaatcttcagctttgcttcctccaccaccatccagtcctcct
cccttgtcctcaaccatgatcctccctcctcttcctcctcctccagactcctgctccact
cagggatccttctccataggggagctagaggtcaaagaggaagagaaacttcatgaaaag
acagaagctttgcagcagaggacagtggagctcgctcgctcacttcaggatgagagagag
gagaaggagagagtgatggagagacatcaagaaactacgaggaggctgcagtcggtcagt
caggcggtgatcagactgtccagagtcgtcagcagcagaagtcgtccagcgagctcctcc
ccagacgatgttctccgcgctgacctgtcctccatgctgtctgtcctctcccaggctgaa
agcgtcctgctgaggaggagcgaggagctgcagggggcggagctaaacctgcggcggctc
agtgagtcgaggagcggcctgcagctgcagctgaagcagcttcaggacgtccaccagcag
cttctcgttcgctcacaacacacacagcaggagctgacgcacacacacagcgtcctctgc
agcgagaaggaggtgtcgagctccctacgcctgcagctggaggaggtgcaaagaagagag
gaagaggtgaagagggagaacctcagactgaggagagaaagagacagagaggaggagaag
aacctgcagctggagacggactcacaccggcgggtggaggcggagctcctggagagtgtc
caggtgacggagagagaacatctgcaccagatggagctcctcagtctgaagggggcgctg
gagagagaacagctggacaggcagaaagcagagaaggaggctgcagactccagggacgcc
ctgcaggagtgccgtggaagcgtgctccgcctctcgtccttggaaagcctgctgaggcgg
gacctggaggagagtcgagacgctctgaagaaggtttctgctcttaactctgctctggcg
tcagacaagagggcgttgaaccagcagctgctgcagctggaaggcaaactgtcagagagc
cagtcgcagctgcaggctgcgagttcagagcttacctgtctgcagagagacgtcagaacg
ctcagagggcagacggaccaggatgccgacatcatccgtcagctgaaagagcagcaggtg
gaggctgtgaagaactcagagggaaaggagagggagctgctcctactggaggaggacaga
acaagtggcgaacaacagctagaggagcttcgctctcagcatgtctcgctgtgccaggag
ctaaaagagttgcaggaggagctgcagcaggcgaaccaagaggtcacgatgagaaacgag
cagcaggaggagcagcagagagagagcaggaggctgcaggaggagctccagagtgagcgt
agacaccaggcgcagctggaggaggagctacatgagctcaggtctctgtcggtgtcgcag
cagctgcagctcagccagcagcagcagctgctctctcaggctgaggtggaccgctgtcag
ctgagcacgcgcctccatgcgctgcaggaggccaagctcaccttacagggtgagatcaag
tgtctgagaggagaactccagagagagaccgccagcagagagagaagcgaggacgagaag
gaggcgctgcaggaagacgtgcagagactgacggaggaggtgcaggagctgaggaggagg
gcagaggaagaagaggagaagaagatgtgccacaaagaacgagagacactgagggaggag
ttaagagtaagagacggggagctggacgccctgaagagacgcactgagaggatagaggag
gagctggaagaaaggagacaacaggtggagagactgaaggaggaggtgacacaacgaggt
acccaagtcagcctccttaacgagagaatagtgaatttagaagaagaaaaggagatactg
caggatgaggcaaggagtactgaggtcagactgcaggaggaggaggagaaacggagggag
gaggaggtgcagagagacggggagactgaagctctctgtgacagaatagagaaattagaa
agagagaaggatgaaatagaaaaggaggtacagcagctgaagagtaaagcgcaggagcaa
gaggagagatggaggtcaaacgataaggagcaacagaacgagataaacagactgagagga
gaaaactcctccctccaggagcacagaaagtcagagaagcgacaaatagagaaactgcaa
catgaaaaaatggaggttctggagaggctacaagagagagttggagaggtggaactgatg
aaggtaaaactaaatgtggctcaggaggagagggaggagatggtggaggaggtgcagaaa
agggagcgcagcctggagaaacagatgtgtgcagtgcgagaaagggaggaggaaatggag
agattgaaggagcggctgaagttggcgaaggagcgggaggaggaaacggagagggagctc
caggaaactgttgacaaactgaagaaaaaggaggcgagggaggaacagctggaggtgctg
ctcaaagagaacagggagcttttggagcaggaggaaagagagcgagaagtaagagaagac
aggatctcctccttgatcaaagaattgcaggaggcgcatgctgtgagtcagatagcaaag
aggagaagcaccgaaaagcaggaggcccatgacagactgcaggaggaggtggaggactgg
caggagcaggcagagcaaagtctgaagcaggtggcaaagctcaaagaagccctgaagggg
agaaatgaggaggtgagccagctgaaggtaatgcttaaagaaaaagaagaggagtggaaa
gagcaggaggcgcagagcaaaatggacaaggaaaggaggagaaagctggagaacaagctg
gtggaggtggaggaggacatcaccaggttagagaagaaagtgagactgatacaggcggag
agggataaagatagggaggaggtgaagaagttgaaggacaacctgggaaaaagtgaaaac
aaagagagggagcaaggagaaagaatgaggagaatggaagaggagaagatgatgttgagt
agcaatttgagagagatagaggaggagctaaaagcagaaaaagagcaaacgcggagagta
aggaaagagaggagcagtctggaggacaaactaaaagaaaaagagagagaaatagatgag
tgtagggatttggtgagaagtaaggaggagaaatttcaggaggcgaaagagatggatcgg
aaaatgttggagaatgaaaagaatcggcatctgctgttggaggagaagggggagaccagg
gttaaagagcttgaggaggagaaggaggaccttttactgaagttaatgaaaaaggaaaaa
gaagtgacagaactccaagaggaggtgcagagcacgagggaggaattggataaaaagaaa
gaggaggtatataatgtaaaaagggaatgtgaggaggcgcaggaaagtctaaaatcattg
aagaggaaaatgatttcgctccaagaggaggtgaatcagaagcaaaaagagaatgaggag
gcccaggagaagctaaaatcactgaagagggaagtgatgtttctccaagaggaggtgaaa
caaaagcaaaaggcacacgaggaggcacaggagaagctaaaatcacttacaaaggaagtg
atgtttctccaagaggaggtgaaagaaaagcaagaagcacacgaggaggcgcaggagaag
atgacagtgctaaaggaggaggtgcatcagaaacatttaacagaagagaacgagtggaga
gcaaaggatatgatgaacagaaatgaagctcaggagctacagaggaaaatagatgaggca
caggaggagctggagaggagcaacaaggagatctacacacttaaagaggagctagaaaag
gaacaaagagagaaaaaggacattcatgatgagctgataaagaggagtgaagaggttgca
tcgctaagagagaaaataaaagaggagctcagcaggaccaaagaggaggaggaggaggag
acagaaaaaccgacaagagagacgattgagttggccactctaaaggaggagctgcacaag
gaacagagggagaaactggagactctggaggagctgaagaagaggagagaggatgtcact
gtgcttaaaggagaagtgacgaaggagtgcatgcagaaggaggaggtgcaggaggagcta
agaagtgtgcagcgcagcttggagcagaagtctcagagtctgagctcccttcagagtcag
gtgacggatctgagactcagcaaggatcgagtcgaggaggagaagcagcaaatgaaagga
ggcctgcaggtggtgctgaaggagatgaacttgctgaaggttctcctgcaggaaagccat
gcagaaggagaactgctgaggagcaccctggaggagaggaagaaggaggtggggagaatt
agacaggagaacctgcagatggaagagaggcaggaggagctggaggagctgagagccaga
gtcaaagccctggagaaaaggaggacggagatggctgaggagctggataaggctgatgag
aggaggagggaggctgaggagtggtggaggagcaaaatgaaggaagtagaacaggagaaa
gggatgatgcaaagcactctggacgcagaaatacagacgctgacgcagaaccacgaggag
ctgctgaaggagtcgaggtccaagcttcaggacagtttgagggagcttgaggaggcgagg
gtcgagctcagccggaacagagccgtgatggaggagcagaaaactcggatcactctcctg
attgcagacagagaggagtcgggggagcagaggaggaggagggacagccaagaagaaaga
ggagaggggaagcaggaggagatcaggaggcagctccagcagacggaggctcaggtggac
agtttgactctgagggtccaggagctgcaggaggacagaaatcgactccgattggctctg
gaacaaacagaggcggagctgataaaacacccctcccagcaggaacagagccagggggcg
gggcttagcccagaagagactgtagggggcagactggaggtcctgcagcggctggtggct
gagctggagctggaacagaaacgactgcagaagaagaactccaatctagagaagcaaaaa
gacaggctgaagaaagacagagatgttctgagagacatcctgagacaggtggagctggag
cgagggaggctcagccagcagctgacagacagcacagagtctcaggtgggacaggtgtgc
gcacatgctacagaagaagatcgtctgcgcagtaaagtgaaggagctggaagaccaggtg
agtcagcttcgtctgtctttggccgtggaccagcagcagaaggcggagtttatccagcag
tcatccagaaacagccaatggctgctctccttaagacgggacctcaacgattcgctgtct
gcggtcactcgccgtccaatcccgtccgtcctggagtccgagacgcagcggttggaccgc
agcctgagggaggaggagcttagactttcctttagccgatcgtga
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integrated database retrieval system