Oryzias melastigma (Indian medaka): 112155003
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Entry
112155003 CDS
T07439
Symbol
fam160a2
Name
(RefSeq) FTS and Hook-interacting protein homolog
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155003 (fam160a2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112155003 (fam160a2)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
112155003 (fam160a2)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
112155003 (fam160a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
112155003
NCBI-ProteinID:
XP_024142112
Ensembl:
ENSOMEG00000015926
LinkDB
All DBs
Position
LG21:7089496..7108107
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AA seq
1139 aa
AA seq
DB search
MSWLSRLNPRGPGSRSGRTAAPLSPCTADPETCLMVFKNHWRQVSWVLEQRESSSSSDDL
TAVRNNTDQMLCLLAEERPAESAEGGSGVASMGPILELVITENILERLVQWHLCRGLDPD
SQGALLKLFEMLIGQSQQPLLQHTAVLHPLLRLLGACADPELGCPLALENSLVLLLNQVC
VSMARQPVILELLFRASPAQQGSTNLLIFSLLVPFIHRDGAIGQQARDALLLVMAASASH
EAAARYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVLFMNSL
EFCNAVVQVAHPTVSSQLLDYLHNGFLVPVMGPALHKSSVDEMIASTAYLDLFLRSITET
SLLKTFLRFILLHRHDNDTILDTLLTRISSNSRLCMVSLSLFRTLLSLNCEDVMLQLVFR
YLLPCTHVMLSQRRAIRETDMYGKCADKFLSLIPECCRQYASAASEREEDNPFWSKVLNS
PGTETPAPPRPSTPSRLSLFMRQHAGGGGSGGGNPSTSTSMESLQSGPSGSHPLSPDSPM
HQHGHTDCLDWDAGFLEYLKDARRGIEVCSWACRGWSAPYDGENPSPNTAPPPPPPPTSN
PSMAMFPEHFSFHQGVSSSTPPGQQRAAIVAAARSEWSSSDRDSGEWDVTIGQNNCISLT
PRSKKRSLQREELLPKPVPPLIPSSSTSTPLSASHSMSSPAAHIPTSAITVNYQAMFNGT
VRQGDECSDSHDRGLEVKKVKRDLGEPQYLDENANQNGSMVSCPSLPKSIFSNRDVGDAK
SLHFNQTSSQCSTSKTAPDVSNPHSTCSDPPESNPSQQSVESLIEELLEQAPGDPQVSAD
ANGQGISIEAFTLELRELEDRVKERNRSACKQEPGAAETLPAEQQEEEQLPTALEAKGDA
SVVGAPSPARPINQPTSQPYTGPFIVVLFAKLENMLQNSLYVNILLTGIVAQLACYPQPL
LRSFLLNTNMVFQPSVKSLIQVLGSVKNRIEAFAASHEDFPVMLRKAQQYLVARGKLDWT
DLPAAVPTLRRTESLVKSRKPSLGDLILRHTNSPTRARNAAQVALAHVRDGGQSLHSALF
RGGGSSGGASGLEKQAEALRVKNAVYCTVIFCEFLKELAALAQEHAVTLPFPQSKEAEE
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctgagcaggttgaacccccgtggccctgggagccggtctggtcggaccgct
gctcccctcagcccctgcaccgctgacccggaaacctgcctcatggtgttcaagaaccac
tggagacaggtttcttgggtgttggaacagcgggagtcctcgtcctccagcgacgatctg
acagcagtgaggaacaacacagaccagatgttatgtctgctggcggaggagcggcctgct
gagagcgcagagggaggctccggcgtggcctccatgggccccatactggagctggtgatc
acagagaatattctggagcgactggtgcagtggcacctctgtcgaggattggaccccgac
agccagggggctttgctgaagctgtttgaaatgctcatcggtcaatcccagcagcctttg
ctgcagcacaccgccgtcctccaccccctgctgaggctgctgggcgcttgtgctgaccca
gaacttggctgccctctcgctctagagaacagcttggtgctcctcctcaaccaggtctgt
gtgtcgatggctcgacagccagtgatcttagaactcctcttccgggcttcacctgcccag
cagggctccaccaacctgctcatcttctccctcctcgtccccttcatccaccgggacggg
gccatcgggcagcaggcccgagacgcgctgctgctggtgatggcggcctcagccagccac
gaagctgcggcgcgttacatcgctgagaactcttacttctgcccggtgttggccacgggc
ctcagcgccctctactcctctctgcccagaaagattgaagttcgcggggacgactggcac
gccctgcggcgagaggactggatgggtgtgtcttcactcgtgctctttatgaactctctt
gagttctgcaacgccgtggtgcaggtcgcacatccgacagtcagttcccagcttctggac
tacctccacaatggcttcctcgtaccagtcatgggccccgccctccataagtcatctgtg
gacgagatgatcgccagcaccgcctacctagatctgttcctgcgcagcatcacggaaacc
tccctcctgaaaaccttccttcgctttatcctgctgcatcgccacgacaatgacaccatc
ctggacaccctgctcacgcgcataagcagcaactccaggctctgcatggtgtccttgagt
ctcttcaggactcttctgtccttgaactgtgaagatgtcatgctgcagctggttttcagg
tatttgctgccctgtacacatgtaatgttgagtcagcgtcgggccattagagagacggac
atgtatggaaagtgcgcagacaagtttctgtcgctgatccccgagtgctgccgacagtat
gcatccgccgctagtgagcgggaagaagataatccattctggagcaaagtactcaacagt
cctggcacagaaactccggctcccccccgacccagcacgccgtcccgcttgtctctattc
atgcgccagcatgcaggtggaggcggatcaggaggggggaacccctccacctccaccagc
atggagtctctgcagtccggtccatccggctcccatcctctgtcccccgacagtccgatg
catcagcacggccacacagactgtctcgattgggacgcagggttcctggagtacctgaag
gacgcccggcgaggcatcgaggtttgctcctgggcctgccggggttggtccgccccctat
gatggagaaaacccctccccgaacacagccccaccacctccacctcctcctacctccaac
ccctccatggccatgtttcccgagcacttctctttccaccagggggtgagcagcagcact
cctccgggccagcagagggcagccatcgtggcggcggcacggtctgagtggagcagctca
gacagggacagcggggagtgggatgttacgattggtcaaaataactgcatcagcctcacg
ccgcgctctaagaagcgcagcctgcagagagaggagctccttcccaaacctgtgcctcct
ctcatcccctcctcttccacctccacccctttatcagcgtcacactccatgtcatctcca
gccgctcacattcctacctctgccatcactgtgaactaccaggccatgtttaacggaacg
gtcaggcagggagatgagtgctcggacagtcacgatcgggggctggaagtgaaaaaagtt
aagagagatttaggagagccgcagtatttggatgaaaatgccaatcagaacggatctatg
gtgtcctgcccctccctccccaaatccattttcagtaaccgtgatgtcggcgatgctaaa
tctcttcacttcaaccagacttcctcccagtgctccacgtccaagacggcacctgacgtc
tctaatccacacagcacatgttcagatccacccgaaagcaacccgtcacagcaatctgtg
gagagcctcatagaggagctgctggagcaggcacctggagatccacaggtgtctgccgat
gcaaacggtcagggcatcagcatcgaggcgttcacgctggagctgagggagctggaagac
cgggtgaaggagcgaaaccggtctgcctgcaaacaggagccgggcgctgcagagactctg
cctgctgagcagcaagaggaggagcaactccccacagccctggaggccaaaggagacgcc
tctgtagtgggagcgccaagtccagcacgaccaatcaaccagcctacctcccaaccatat
acaggtccattcatagtggttctgttcgccaagctagagaacatgctccagaattcactc
tacgtcaacatccttctcactggcatcgtcgctcagctggcttgttatcctcagcccctc
ctacgctccttcctgctgaacaccaatatggtcttccagcccagtgtcaagtcactgatc
caggttttaggctctgtaaagaaccgcattgaggcgtttgcagcctctcacgaggacttc
cccgtcatgctgaggaaagcccagcagtacctggttgctcgaggcaaactggactggacc
gacttgcctgcagcagttcccaccctgcggcgcaccgagtctctagtgaaaagtcggaaa
ccgtctcttggagacctgatcctccgccacaccaacagccccacccgggcgcgaaacgcc
gcgcaggtcgcactcgcacatgtacgggacggaggccaatcattgcacagtgctctgttc
cgtgggggcggcagcagcggcggcgcatccgggctggagaagcaagccgaggcgctgcgg
gtgaagaacgccgtctactgcaccgtcatcttctgtgagttcctaaaggagctggccgcc
ctggctcaagagcacgccgtgactctgccgttccctcagagcaaggaggcagaggaatag
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