KEGG   Oryzias melastigma (Indian medaka): 112155016
Entry
112155016         CDS       T07439                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04145  Phagosome
oml04210  Apoptosis
oml04530  Tight junction
oml04540  Gap junction
oml04814  Motor proteins
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112155016
  09143 Cell growth and death
   04210 Apoptosis
    112155016
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112155016
   04540 Gap junction
    112155016
  09142 Cell motility
   04814 Motor proteins
    112155016
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112155016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112155016
   03036 Chromosome and associated proteins [BR:oml03036]
    112155016
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112155016
   04147 Exosome [BR:oml04147]
    112155016
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112155016
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112155016
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112155016
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112155016
  Exosomal proteins of other body fluids (saliva and urine)
   112155016
  Exosomal proteins of colorectal cancer cells
   112155016
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 112155016
NCBI-ProteinID: XP_024142140
Ensembl: ENSOMEG00000001456
LinkDB
Position
LG21:complement(16201116..16206101)
AA seq 449 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMLAQKPTGGHDDSFTTFFSETAARK
YVPRAIFVDLEPTVIDEVRAGTYRQLFHPEQLISGKEDAANNYARGHYTIGREIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPIISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgagaatgcatctccgttcacgtgggccaggccggtgtgcagatggggaacacctgt
tgggaactctactgtctagagcacggcattcagccagatggtcagatgttggcccaaaag
cccacaggtggccacgacgactccttcaccacctttttcagtgagactgcagctaggaaa
tacgtcccaagagcaatctttgttgaccttgaacccactgtcattgatgaagtgagagcg
gggacatatcgtcaactttttcatcccgaacagctgatttcaggaaaagaggatgcagcc
aacaactatgctagaggacactacaccattggtagagagatcatcgactctgttctggac
agaattcgcaaactggctgatcaatgtaccgggctacaaggattcttggtcttccactcc
tttggtggaggcaccggctctggtttcacgtccctgctgatggagagactctctgttgac
tttgggaagaagtccaagcttgagtttgccatctaccctgctccccaggtttccacagct
gtagtggagccttacaactccatcctaactacccacaccaccttggagcactctgactgt
gcattcatggtggacaatgaagctatctatgacatctgccgcaggaaccttgacatcgaa
cgtccatcatatactaatctcaaccggcttatcagccagatagtctcatccatcacagcc
tcactccgctttgatggagctctgaatgtcgatctgaccgagttccaaactaacttggtg
ccatatcctcgtatccatttccctctggccacctacgcacccatcatctctgctgagaaa
gcctaccacgagcagctgtctgtggctgaaattaccaactcctgcttcgaaccggctaat
cagatggtgaaatgtgaccctcgccatggcaaatacatggcctgctgtctgctgtatcgt
ggtgatgtggtccccaaagatgtcaactctgccattgcagctatcaaaaccaaacgctcc
atccagtttgtagactggtgccccacagggttcaaggtgggcatcaactatcagcctcca
actgtggttccaggtggagatctggctaaggtgcagagagccgtgtgtatgttgagcaac
accacggccatagctgaggcctgggctcgactagaccacaagtttgatctcatgtatgcc
aagagagccttcgtccactggtatgttggtgagggcatggaggaaggagagttctcagaa
gcaagagaagacatggctgctctggagaaagattatgaagaagtggggattgactcattt
gaagaggatgaggaaggggaggaatattaa

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