Oryzias melastigma (Indian medaka): 112155041
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Entry
112155041 CDS
T07439
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112155041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155041
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112155041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_bind
GRIP
Cep57_CLD_2
CENP-F_leu_zip
AAA_13
KASH_CCD
HET-s_218-289
Motif
Other DBs
NCBI-GeneID:
112155041
NCBI-ProteinID:
XP_024142182
Ensembl:
ENSOMEG00000023094
LinkDB
All DBs
Position
LG21:complement(11476195..11496195)
Genome browser
AA seq
1653 aa
AA seq
DB search
MEEPGGAAAEAVTPSSASKSKLDTLSKDDLIKYAKKQIAAMQKMKSKCLDLEKEVESLKQ
QQSKPKDSNPDDAALFQELTERMDALLLEKAETQQNVAVLRKELEKTKQQAKDDLAALQS
EHVRVMEEHQRMIKNLESSIQEANSKHLEEVAHFQNLLKEREDGEREREQRQADYAIEKE
KAEEGRRDLEAQLEKLKAELEDSQEKNSLEVSKVQENYQKYLTEAQQEVENLKEELSQKS
LQHEEEMRTLEEDFELERERLLLLHEELTEQLALKDSYLQDVQEEDEEPPRGSGIAKMLE
LSKRTQADCSGGAEDTESSRLAAALEDLQAQNTMLQDELTLLGNLKGELEAELERAKEEF
QVEREELEFKINELQLTKDSPSTEPTVTLDPHRQHEELKESTIDPTQEQSSLKPEEQQDL
SLELRTEALIRERDSALTECQHMRSILQSIETELSEKTKDFVLQYQAMKEQGASKVQELQ
DTIEKLNQERDDVLSKMNDVMEEKNTLMKDIQDLKQKLESPPVEELHSSGEEQATLAGKP
KQSVEDLIQQNEEILSQVEVKENTIQDLKNSVSALKEERDTIQNFLNLKEDEMRNLNEER
TKVMEKLEQEKAKEVLMIREEKENELENLKAETQEKVKHLEEEQENLKESLKQELAKKEE
TLSKLEAAIKEMSAENDNLHQRLEAVLVELSTAQKENELLGSKLSALEVQLEREATEKQE
LEEKLKSVTEDAARSFASMQALEENHSQVLRNSTDEVEELRVRVGELEQERSLLKNTLEE
AQSENKVEEVQTDLQAHIRDLEKERDMLKGNLEEVVNDMEGLQKDLQEMKTLNEKVSDEN
QTLQAQASQLNEAKVEMEKMMENLEKETKDLRDQLTEKDSLISQLRGEVAALQESAVQSA
SSEENKSEMTDRIALLQKEIKEKDEKMNKIKAVAVKAKKELDIHKKEVLALKAEVESLKA
EREKVNSSMKDIIHSAEGYKNLQIDYDKQTEQLDLQKEKVEAAERQIAELTKQLSSAVTQ
GETLNSEKEDLNAGLETARSTVRQLETKNQELQKQLASLDRDLLAERAMKEQKLKDLASA
TKEVEELTAQLRKQQEQSQQTAQELEQLRKEAQQNSLMDMEMADYERLVKELNGKLADKD
EHVKDLKTQINTLTQKQEAFKKEIETLKSQVDNEEEKCSKMKQLLVKTKKDLADAKKQES
SLMMQQASLKGELEANQQHFESSKIEISELTAERHHLQEQLRSALEQQQRTSNSLQQRIH
SLQQDRDAAKAELLETTTEFESYKVRVHNVLKQQKNKASAQSEGDAFKLEREQLTSQIEQ
LRIRLSESQQSLQSSTAELQQLQTEHDTLLERHNKILQENVSKEAELRERLLSLQSENVS
LRSDLSQAQADLSSQVETQRQTYRDQLRKLQDDHRATVETLQRQLTRVEEQLFTLQSQNS
SLLVQSSRKTLGTDLQRRNGDQIQTGMGMVAIGDLQSMAREEGEGMETTETEKSSPAQTS
LPSLEQLLTSPDPKQEPFVWTVEPTKEELSEKLNTATRSMEHMNSLLHETEATNAILMEQ
ITLLKSEMRRLERNQEREKSVANLEYLKNVLLQFIFLRSGSERQALLPVIHTMLQLSPEE
KSKLAAIAQGEEERSGSRGSGWGSYLHSWSGIR
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacctggaggtgctgcagctgaggctgtgactccatcctcagcatccaaatca
aagctggacacgctgtccaaagacgacctcatcaaatatgccaaaaagcagatagctgcc
atgcaaaagatgaagagcaaatgtttagatttagaaaaggaagttgaatccctcaaacag
cagcaatctaaacccaaggacagcaacccagatgacgctgctttgtttcaggagttgact
gagaggatggatgccttattactggagaaggccgaaactcagcaaaatgttgcagtcctg
cgtaaagaactggagaagactaaacagcaagctaaggatgatttagcggctcttcaaagt
gagcatgtgcgtgtcatggaagagcatcaaaggatgatcaagaacctggaaagcagcatt
caggaagccaacagtaaacatctggaagaagtggctcatttccaaaatttgctgaaagag
cgagaggacggtgaaagggagagagaacagcggcaggcggattatgctattgaaaaagag
aaggccgaagaaggaagacgcgacttagaagctcagctggaaaagctcaaagctgaactg
gaggatagccaagaaaaaaattctctagaggtttccaaggtacaggagaactaccaaaag
tatttaacagaggcccagcaggaggtggagaatctgaaggaagagctgtctcagaaaagt
ctgcagcatgaagaggaaatgagaactctggaggaagactttgagcttgagcgggaacgt
ctcctgctactccacgaggagctcacagagcagctcgctctcaaagacagctacctgcag
gatgttcaggaggaggacgaggaacctccccggggttcaggaattgcaaaaatgctggag
ctgtcaaagagaactcaggcggactgctctggcggtgcggaggacactgagagcagcagg
ctggcggcagctttggaggatcttcaggcccagaataccatgttacaggatgagctcacg
cttctcggtaacctgaaaggtgagcttgaagcggagctggaacgagcaaaggaagagttc
caagtggaaagggaagagctggagttcaaaatcaacgagctgcagctcaccaaggacagt
ccatccactgaacctacagtgactctagatcctcaccgtcaacatgaagaattgaaagag
tcgacgattgacccgacacaagaacaaagctccctgaaacctgaggagcagcaagatttg
agcctggagctgagaactgaggccttgatcagagagcgagactctgccttgactgagtgc
caacacatgaggagcatccttcaaagcattgagacggagctgagtgagaagacgaaggat
tttgttctgcagtatcaagcaatgaaagaacagggagctagtaaagtccaagaacttcaa
gatacgattgaaaagctcaatcaagagagagatgacgttttgtccaaaatgaatgacgtg
atggaggagaaaaacactctaatgaaagatatacaagaccttaagcagaagctggaatct
ccacctgttgaagaactgcactcatctggggaggaacaagctacgttagccgggaaaccc
aaacaatctgtagaggatttgatccagcagaatgaggaaatcctctcccaggtggaggtg
aaggagaacaccattcaagatttaaagaattcggtcagtgcgctgaaagaggagcgagac
acaatacagaacttcctaaatctcaaggaggatgaaatgcggaacctcaacgaggagcga
acaaaagtaatggagaagctggagcaggaaaaagctaaagaggttctgatgatcagagag
gaaaaagaaaacgagctggaaaatttgaaagcagaaacccaagagaaggtaaaacacctc
gaagaggagcaagaaaacttaaaagagagcctgaaacaggagctggcgaagaaagaagaa
acactttctaagttggaggcagcaatcaaagagatgtctgctgaaaatgataatctccat
caaaggttggaagcagttttagtggagctttccactgctcaaaaagagaatgaacttctg
ggctccaagttatcagctctggaagttcagcttgagcgggaagcaactgaaaaacaagag
ctagaagaaaagttgaaatcagtgacagaagatgcagcacggagcttcgcgtccatgcag
gcgctggaggaaaaccattctcaagtactccgaaactccactgatgaagttgaagagctg
cgagtgcgtgttggggagctggagcaggagaggagcctgttgaagaacactcttgaggaa
gctcagagtgaaaataaagtagaggaggtgcagacggatctacaggcgcacatcagagac
ctggagaaggagagagacatgctgaaagggaacctggaggaggtggttaatgacatggag
gggctccagaaagaccttcaggagatgaaaacgctcaatgaaaaggtttctgatgagaac
cagacgttacaggctcaggcttctcagctgaatgaagcaaaggtggagatggagaaaatg
atggagaacttggagaaagagaccaaagatctcagagatcagctaacagagaaggactcg
ctcatatctcagctgaggggggaggtggctgctctccaggagtctgctgtccagtctgct
tcctcggaggaaaataaatctgagatgacagacaggatagctttgctacaaaaagaaatc
aaggaaaaggatgagaagatgaataaaatcaaggcagttgctgtcaaagcaaagaaggag
ttggacatccataagaaagaggttttggctcttaaagcggaagtggaatcactgaaagca
gagagggagaaagtaaacagttcaatgaaggatatcatccatagtgctgaaggctacaag
aatctgcaaatagattatgacaaacaaacggagcaactggatctgcagaaggagaaggtg
gaggctgcggagagacagattgctgagctgaccaaacaactcagcagcgctgtcacacag
ggggaaaccttaaatagtgagaaggaggacttgaatgccggtttggagacggcgaggagc
acggtgaggcagctggagaccaagaaccaggagctgcagaaacagttagcaagtctggac
agagatctgttggctgagagagcaatgaaagaacaaaagctgaaggacttggcatctgcc
acaaaggaggtggaagaactgacagcacagctccgcaagcaacaggagcagtctcagcag
accgctcaggagctggagcaactgcgcaaggaggcccagcagaactccctgatggacatg
gagatggctgattatgagcgtctggtgaaggaattaaatggcaaacttgccgacaaagac
gagcacgttaaagacttaaagacccagattaacactctcacccagaagcaggaggcattc
aagaaagaaatagagactctaaaatcccaggtggataatgaagaagagaagtgctctaag
atgaaacagctgctggtgaaaactaagaaagacttggctgacgccaagaaacaggaaagc
tccctcatgatgcagcaggcgtctctgaaaggagaactggaggccaaccagcaacacttt
gaaagctcaaagattgagatttctgagctgaccgccgagcgccatcacctgcaggagcag
ctgaggtcagcgctggagcagcagcaaagaaccagcaactccttgcagcagcgcatacac
agtctgcagcaggacagagacgccgccaaggctgagcttttggaaacaacaactgagttt
gagagttataaagtgcgagtccacaatgttctcaagcagcagaagaacaaagccagcgct
cagagtgaaggagacgcttttaaactggagagggagcagttgacctctcagatagagcag
ctgaggatcagactgtcggagagccagcagagcctgcagagcagcacggcagagctgcag
cagctccagaccgagcatgacactctcctggagaggcacaacaaaatcctccaggaaaat
gttagcaaggaggctgaactccgtgagaggcttttgtctttgcagtcagagaatgtgtct
ctgcggtcagatctgtcccaggctcaggccgacctctcgtcccaggttgaaacccagcgg
cagacttacagggaccagctgaggaagctgcaggacgaccaccgggccactgtggagacc
ctgcagagacagctgacacgcgtcgaggagcaactcttcaccctgcagagccagaacagt
tcattgttggtccagtccagtcgcaagaccctggggacagaccttcagcgcagaaatgga
gaccaaatccaaaccgggatggggatggtggctattggtgaccttcagtcgatggccagg
gaggaaggggagggcatggaaaccacggagactgaaaaatcctctccagcacaaacctca
ctgccctctctggagcagctacttacatcacctgatcctaaacaagaaccatttgtgtgg
acagtggagccaaccaaagaggagctatctgaaaagctgaacacagccacgcgcagcatg
gagcacatgaacagcctgctgcacgaaactgaggccaccaatgctatcctcatggagcag
atcactctgttgaagagtgaaatgcgacgtcttgagaggaaccaggagagggagaaaagt
gttgccaaccttgagtatctgaagaacgtcttgctgcagttcatctttctccgttctggg
agtgagaggcaggccctgctgcctgtcattcacacaatgctgcagcttagtccagaggag
aagagcaaactggctgccattgcacagggtgaagaggaaagaagtggttctcggggttcg
gggtggggttcgtacctccacagctggtctggaatccgttaa
DBGET
integrated database retrieval system
