KEGG   Oryzias melastigma (Indian medaka): 112155129
Entry
112155129         CDS       T07439                                 
Name
(RefSeq) general transcription factor IIF subunit 2
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112155129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112155129
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     112155129
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N
Other DBs
NCBI-GeneID: 112155129
NCBI-ProteinID: XP_024142350
Ensembl: ENSOMEG00000022887
UniProt: A0A3B3CUG0
LinkDB
Position
LG21:11379648..11427291
AA seq 254 aa
MSDKVEVNLTGVKQSKGVWLVKVPKYLSQQWDKATEKGEVGKITIGKKQGKTEVCFSLSE
DLAALGSAEEKDASVQVPRDHPFTMQTVGGQTMAVFSQSDTDGISVEGMVVHRAECRPIV
SEDYMKIKRLQIESVKPQRLSQQLDRAITTVFKPVANHDFNVEFEKKKKSEGKMVRAERQ
VVMDMLFSAFEKHQYYSFKDLVDITKQPVTYLKEIMREIGICNRKGAHKSNWELKPEYQH
YRPAEEEEEEKQDS
NT seq 765 nt   +upstreamnt  +downstreamnt
atgtcagacaaagtggaggttaacctgacaggagtcaaacagagcaaaggcgtgtggctc
gttaaggttcccaaatacttatcccagcaatgggacaaagccacagaaaagggagaagtt
ggaaaaattacaattggcaagaaacaaggtaaaactgaggtgtgtttcagtctgagtgag
gatctggcggccctgggctctgcggaggagaaggatgcatcggtgcaggtccccagggat
catcccttcactatgcaaactgtgggcggacaaaccatggctgtcttcagccaaagcgac
acagatggaatcagtgtggagggcatggtggtgcacagagctgaatgcagacccatcgtc
tctgaagactacatgaagatcaaacggctgcagatcgagtctgtcaagcctcagcgtctg
tcgcagcagctggaccgggccatcaccactgtcttcaagcctgtggccaaccatgatttc
aatgtggagtttgagaagaagaagaagtccgaagggaagatggtgagggcggagcgacag
gttgtgatggacatgctcttctctgccttcgagaagcaccagtactacagcttcaaggac
ctggtggacatcaccaaacaacccgtgacctaccttaaagagatcatgagggaaatcgga
atatgcaaccgcaaaggagcacacaagagcaactgggagctgaaaccggagtaccagcat
taccggcccgctgaggaggaagaggaggagaagcaggactcatag

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