Oryzias melastigma (Indian medaka): 112155154
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Entry
112155154 CDS
T07439
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112155154 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112155154 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112155154 (si:dkey-251i10.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
112155154
NCBI-ProteinID:
XP_024142429
Ensembl:
ENSOMEG00000017220
LinkDB
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Position
LG21:28039205..28041628
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AA seq
753 aa
AA seq
DB search
MAGGSDGSGSKSSTEMEREDPEMEREAEDERADEEDERRRVRLVEAISALRGGRKKPLGE
RSEAAVRMSEFAVTAEGERQKVQLSDLIGGAKDGPAVPTQTRKQLQNLRRSQKTVEQPLS
RQESERVQRDLAFQKAAVHVSRWKSVVIQNRKAEQLVFPQNQEPAGPKPLEKVVSGWKAQ
TPLEQEVFNLLSANKQPIHDPVLTPAEEASLRAMSLEEAQIRRAELQKVRALQSYYEAKA
RRERKIKSKKYHRVQNKARRREFLKQFEQMVKTDPTGALEELNKMELARMKERMSLKHQN
SGKWARAKAVMAKYDQGARRAMQQQLELNKDLTQKVRSALSTQEEQEEDAASEPELLPDF
VNDAEPGQVSSNPWMRGELSAEPAEPQRSEQEEAGPAEEEEEEEEKEVDEEEELLREFES
RRKLRQEEEQEEPAGEEEEESAEEEEGLSEFRSLFKGVTEGLKEEAAAPANSAPLEEGLM
RIRTVEDVELLPPEDTELRPPTEAPQPPPKEEAPPSGKKARKKRKRDIELKEVLTKKAKT
VTVPLAPTTTDAADGSDEELDQRGLIMEAFAGDDVVADFLKDKRKQEDAAKPKVVDLTLP
GWGEWGGQGLKPSSRKRQRFRVKVAPAEPRKDQRLPAVIISEQRNSSLGAHQVSSLPFPF
DSHAQFESTVRTPLGRTWNTERTVKKLTKPKVLTQLGSIIEPMTEEELTKNKEKKVLAEG
AGKEDPHKTKRQKRRGRKDGPPKKTRRPTKGRC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggttcggacgggagtggaagtaaaagcagcaccgagatggagcgcgaggat
ccagagatggagcgcgaggcagaagatgagcgcgcggacgaggaggacgagcgcaggcgc
gtgaggctcgtcgaggccatctccgcgctccgcggcggcaggaagaagccgctgggggag
aggtccgaggcggccgtgcgcatgtccgagttcgccgtgaccgcggagggggagcgccaa
aaggtgcagctctctgacctcatcgggggggcgaaggacggccccgcggttccgacccag
acccggaagcagctgcagaacctgcgccgcagccagaagacggtggagcagccgctcagc
aggcaggagagcgagcgcgtgcagagggacctggccttccagaaggccgccgtgcacgtg
agccgctggaagagcgtggtgatccagaaccgcaaggcggagcagctggtcttcccgcag
aaccaggagccggcgggacccaaaccgctggagaaggtggtgagcggctggaaggcgcag
actcctctggagcaggaggtcttcaacctgctgtccgccaacaagcagccgatccacgac
ccggttctgaccccggcagaggaggcctcgctccgggccatgagcctggaggaggcccag
atccggagagccgagctgcagaaggtccgggccctgcagtcctactatgaggccaaggcc
cgcagagagaggaagatcaagagcaagaagtaccaccgggtccagaacaaggcccggcgc
cgagagttcctgaagcagttcgagcagatggtgaagacggacccgaccggcgctctggag
gagctcaacaagatggagctggcccgcatgaaggagaggatgtccctgaagcaccagaac
agcgggaagtgggcccgggccaaagccgtcatggccaagtacgaccagggggcccggcgg
gccatgcagcagcagctggagctgaacaaagacctgacccagaaggtgaggagcgcgctc
agcacacaggaggagcaggaggaggacgcagcctccgagccagaactcctgccggacttt
gtcaacgacgcagaaccgggtcaggtctcctccaacccctggatgagaggagagctgtct
gcagaacctgcagaaccccagaggagcgagcaggaggaggctggtcctgcggaggaggag
gaggaagaggaggagaaggaggtggatgaggaggaggagcttcttagagagtttgagagc
aggagaaagcttcgccaggaggaggagcaggaggagcctgctggtgaggaggaggaggag
tctgcagaggaggaggaggggctttctgagttcaggagtctcttcaaaggagttacagaa
gggctgaaggaggaggcggcggcgccggctaactccgccccacttgaagaaggactgatg
agaatcaggactgtcgaggatgtggagctcctcccacctgaggatacggagctccgccct
cctacggaggctccacagccaccccctaaagaggaggccccgccctcagggaagaaggca
agaaaaaaacgtaaaagagacatcgagctaaaagaagtcctcaccaaaaaggccaaaacc
gtcacggtgccgctcgccccgaccacgactgacgccgcagacggttctgatgaggagctg
gaccagcgggggctcatcatggaggccttcgccggggacgacgtcgtcgcagacttcctc
aaggacaagaggaaacaggaggacgccgccaagcccaaggtggtggacttgacgctgccg
ggctggggggagtggggggggcagggcctcaagccgtccagccgaaagcgccaaaggttc
cgggtcaaagtggcgccggctgaaccccggaaggaccagcgcctgcccgccgtcatcatc
tccgagcagaggaacagctcgctcggcgctcaccaggtcagctccctgcccttccccttc
gacagccacgcccagttcgagagcaccgtgcgcacgccgctgggccgcacctggaacacc
gagcgcaccgtcaagaagctcaccaagcccaaagttctgacccagctgggcagcatcatc
gagcccatgaccgaggaggagctgaccaagaacaaggagaagaaggtgttggccgagggg
gcggggaaagaggacccccacaagaccaaacgccagaagaggcggggccggaaggacggc
cctcccaaaaagaccagacggcccaccaagggcagatgctga
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