Oryzias melastigma (Indian medaka): 112155229
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Entry
112155229 CDS
T07439
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112155229 (nyx)
Proteoglycans [BR:
oml00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
112155229 (nyx)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
112155229
NCBI-ProteinID:
XP_024142512
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Position
LG21:1061430..1066325
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AA seq
473 aa
AA seq
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NVFKLVCVLLSVSVLCLLPQAVLARWACVRACPPSCSCTAERSCSVLCDRSGMAELPKEF
PCEASAINLEKNRLKFLSERAFGTLPSLKILTLDHNNISFITPGAFKGLSNLVELKMAHN
EYISYLHTRTFTGLKKLLRLDLSDCNLFSIPDRIFIEQTALKELLCFQNNFRRIPGAIRG
MENLTHIYLERNKIEAVAYNSLLGLGSLKYLNLQENRINVIHDNAFQDLIRLENFYLNDN
LLSDLPRSAFRGLSRLKMLNLGGNQLVNVSKTWFSDLVELEVLYLDRNQLLNIEEGTFEN
LTSLITLHLNSNNLTTLPFSVFQPIYFLGHLYLFRNPWECDCSLEWLKEWMENYKLVRDI
PCASPSSVAGLDLSRVVFANMNGTCVDPTDLNLTTPSSEFIPTTENRFNSLISKLLQQEL
REEMGNSTESLRNGTLLESEEGQLSAGAGGQRSQLLLCCAVVWISLSDVFSCT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
aatgtcttcaagcttgtctgtgtcctcctttcagtctctgtgctgtgcctgctgccacag
gcagttctggcccgctgggcctgtgttcgggcctgccccccgtcctgcagctgcaccgcc
gagaggagctgcagcgtgctctgcgaccgctcgggcatggccgaactgcccaaagagttt
ccctgcgaggcttcggccatcaacctggagaagaacaggctgaagttcctgtctgaacgg
gcctttgggaccctgccctccctgaagatcctcaccctggaccacaacaacatctccttc
atcactccgggagccttcaagggcctctccaacttggtggagctgaaaatggcgcacaat
gagtacatcagctacctgcacacgcggacgttcaccgggctgaagaagctgctgcggctg
gacctgtcggactgcaacctgttcagcatccccgaccgcatcttcatcgagcagacggca
ctgaaggagctgctgtgctttcagaacaacttcaggaggatcccgggagccatcagaggc
atggagaacctgacccacatctacctggagaggaacaagattgaagcggtggcctacaac
tccctgctgggcttggggagtcttaagtacctgaacctccaggagaaccggatcaacgtc
atccacgacaacgccttccaggacctcatccgcctggagaacttttacctcaacgacaac
ctgctgtcggatctgcccaggtccgccttcagaggcctcagccgcctcaagatgctgaac
ctgggggggaaccagctggtcaacgtgtccaagacctggttcagcgacctggttgagctg
gaggttctgtacctggacaggaaccagctgctgaacattgaggagggcacctttgagaac
ctgaccagcctgatcaccctccacctgaacagcaacaacctgaccaccctccccttcagc
gtcttccagcccatctacttcctgggccacctgtacctgttcaggaacccctgggagtgc
gactgctccctggagtggctgaaggagtggatggagaactacaagctggtccgggacatc
ccctgcgcctcgccgtcctctgtggcggggctggacctgagcagggtggtctttgccaac
atgaacgggacttgtgtggaccccacagacctgaacttgaccacgccctcctcggagttc
atccccaccaccgagaaccgcttcaacagcctcatctccaagctgctccagcaggagctg
cgggaggagatgggcaacagcacggagagccttcggaacgggacgctgctggagtcggag
gaggggcagctctccgcgggggcggggggtcagaggagccagctgctgctctgctgtgcc
gtggtctggatcagcctctcagacgtcttttcctgcacatga
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