Oryzias melastigma (Indian medaka): 112155258
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Entry
112155258 CDS
T07439
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112155258 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112155258 (gtf2e1)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
112155258 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
112155258 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF1272
Zn_ribbon_15
DUF7632
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
112155258
NCBI-ProteinID:
XP_024142546
Ensembl:
ENSOMEG00000015036
LinkDB
All DBs
Position
LG21:complement(26540294..26547895)
Genome browser
AA seq
441 aa
AA seq
DB search
MMEPDVLTEVPAALKRLAKQVVRGFYDVEHALALDVLIRNPCVREEDMQELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAVDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCSSAFTDLEANLLFDMMTGTFRCTFCQTEVEEDTSVCPDGRTLVARFNE
QIEPIYALLRQTEDVNLSHDLLEPEPTEIPALKQSRERAAASAGNAAGGQHREAWSTKGS
SYADLYTQNVVISMDEQDEQQKAASEAKAPKERPVWLTQSTVQGAYSEADGLKNDGSSLP
GSQDGAAARDQTDENEEVMRALLIHEKRAVAGAGVGGAGASSRAPASSAANASDSESDTS
ESDDEFPSGPPPVMAAQQREEDEDDDDDFEEVGDEPMVTVGGRPFSYREVSQRPELVEQM
SAQEKEAYIEMGQNLFQDMYF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccggatgtcctgacggaggtccctgcggcgctgaagcgcttggccaaacag
gtggtccggggcttttacgacgtggagcacgccctggccctggacgtgctcatccgtaac
ccgtgtgtgcgtgaggaggacatgcaggagctgctgaagttcgaccgcaagcagctgcgc
tctgtgctcaacaccctgaaggcagacaagttcgtcaagtgccgcatgagagtggagacg
gctgtcgatggcaagacgacgagacacaactactatttcatcaactacagagtgttggtc
aatgtggtcaaatacaaactggatcacatgcgacggcgcattgagacggatgaacgagat
tccaccaaccgagcctccttcaggtgtccctgctgctcctccgccttcacggacctggag
gccaacctgctctttgacatgatgacagggacatttcgctgcaccttctgccagacggag
gtggaggaggacacttccgtctgtcccgacggcaggactctggtggcccgcttcaacgag
cagatcgagcccatctatgcgctcctgcgccaaaccgaagacgtcaacttgtcccacgac
ctgctggagcccgagcccaccgagatccctgctctcaagcagagtcgggaacgtgcagcg
gcgtcggctggaaacgccgctggtggacagcaccgggaagcgtggtccaccaaaggctcg
tcctacgcagacctgtacacgcagaacgtggtgatcagcatggacgagcaggacgagcag
cagaaggcggcgagcgaggccaaggcccccaaggagcggccggtgtggttgacccagagc
accgtccagggagcttacagcgaggccgacggcctcaagaacgacggatcatctctgccc
ggatctcaggacggagcagcagctcgcgaccagacggacgaaaacgaggaagtgatgcgc
gctctcctcatccacgagaagagggcggtcgcaggagcaggagtgggcggagccggcgcc
tcctccagagctcccgcgtcctccgccgccaacgccagcgactcggagagcgacaccagc
gagtcggacgacgagttcccctcaggtcctccccctgtcatggcggcgcagcagcgagag
gaggacgaagacgacgacgatgacttcgaggaggtgggggacgagcccatggtgacggtg
gggggtcggccgttctcgtaccgggaggtgagccagaggcccgagctggtggagcagatg
tctgcgcaggagaaggaggcctacatcgaaatgggacagaaccttttccaggacatgtat
ttctga
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integrated database retrieval system
