KEGG   Oryzias melastigma (Indian medaka): 112155259
Entry
112155259         CDS       T07439                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112155259 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112155259 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN Alanine_zipper F5_F8_type_C LAMB1
Other DBs
NCBI-GeneID: 112155259
NCBI-ProteinID: XP_024142549
Ensembl: ENSOMEG00000023823
UniProt: A0A3B3E1T3
LinkDB
Position
LG23:complement(19244405..19277897)
AA seq 1834 aa
MVSLFSGSCRPAGGVELVGCRVSRRQLPPAPDFTLINSCWLTHQHLAAAVTDLLSKMLLL
IFTFTSLARWCPVWTQEPEFADVCTEGSCYPATGDLLIGRAHKLRASSTCGLTGPTPFCI
VGHLEEEEKCFQCDSRRMYDEETNDISHTIENVVTTFAPNRLKTWWQSENGVENVTIQLD
LEAEFHFTHLIMTFKTFRPAAMMIERSMDFGKSWQIYRYFASNCETSFPGISTGPMVKVD
DIICDTRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVKFIKLYTLGDN
LLDSRDEVREKYYYALYDMVVRGNCFCYGHASECAPIDGEPSGAEGMVHGHCVCNHNTEG
LNCERCKDFYQDLPWRPAEGKNTHACKKCDCNHHATSCHFDLAVFMATGNVSGGVCDDCQ
HNTVGRQCEQCARFFYQHPSRNLRDPNICEPCDCDPDGSLEGGICDPRTDVAAGLISGQC
RCKANVEGERCDNCRRGYYGLGESPEGCLSCTCNQLGTMPGGAHCDSETGKCICKRLVDG
HNCDQCLPEHWGLSNDMDGCRPCDCDHGGAVNNNCDPDSGQCVCREHMFGRRCDQVESGF
YFIDLDHYTYEAEDAKHGPGVAVVPRPYPLNRSPTWTGMGFVNVPEGAYLEFNVNNIPES
MDYDILIRYEPQLPQQWEQVVLRVERPVFNPPNRSGHCSNSIQSGDEQSISLSPGSRHVL
LVRPVCFEKGLNYTIRLTLPLYSTNSHVQNPYTLIDSLVLMPRVKELEMFHGTKGEAEWD
TFQRYRCLESSRSVIKSPMTDICKDYIFSVSAVLHKGAMACQCDPQGSLSSVCDSSGGQC
RCRPNVVGRNCDHCAPGTFLFSPAGCRPCNCDPLGSVTAFCHEFTGTCQCAPGVTTRQCS
ECLPGFWGFPQCRKCQCNGHSDYCHPQTGECLDCRDFTTGHQCERCMNGYHGNPELGSGE
RCRPCMCPDGPRSGRQFSDSCYFLADPNHLVCVCSSGYKGSRCDECAPGYYGNPLIPGGR
CTACQCNNNIDMHDPKSCDSRTGACLKCLYHTEGHACQHCKPGYYGNATTRSCTKCMCSP
FGTIPEACSSGEDCRCDRRSGQCPCQPNVVGQNCDRCAPDTWGLSSRKGCQRCDCDPIHS
VGSSCDEATGQCVCKPGFGGRTCRECRELFWGDPKVKCHACDCDSRGISSGQCDRATGHC
TCVESASGPRCDQCARGYWGEFPACEPCHRCFSVWDNVVSELTNQTRRLQAQVTELHSIR
VTAPYKELIGSLERNAKAVREILENKTASAKMEAITEDSHEIIGLLSHLSGVMNSTEETL
TFIRDDANMTEANLNALTDEANQLEANVQELRQLVHNIKNANIQGAMSTISAAHMESTAA
EWRSKASTSYPGSTVQESTVLRKTAEDKLSRSQKEFDRKHQRNNRKLENLSQELDKFNLT
RLSEKICGGADEDLGCSSCGGLGCSGDDGQPRCGGEGCGGLLSTSQSALTSAEKLEQQIR
AAMQEVDELSRMVWEANIRAKEAKERAVEAQKNSNHSKERVERSNQQLRSLITEIRDLLT
NEKADASVIEAVANEVLALEMPASAEKLQELTMEIRERVGALTSVDAILRQSAEDIRMAE
ALLRRAKEASENTSDMKKEAEEVKEALEETERAQNTAKDAILLARDNTKGTLDLLDTVEQ
ETAESELQLSNTTRRLLQLEREVGLLRQNGLEMSRLVDDAEQKTQWAKEEAELAERKFEE
EVKDQFEEVKEQVEDRGEAVLQARRRADELQREARELLEQSSSKLQRLGELEISYEANQR
ILEEKTAELEQMEQTARRILDEISQKVTLYSTCL
NT seq 5505 nt   +upstreamnt  +downstreamnt
atggtgagcttgttttctggatcttgccgccctgctggaggggtggagttggtgggatgc
agagtttccagaagacaactccctccagctcctgactttacgctcatcaacagttgctgg
ctgacccaccaacatctcgcagcagctgtaaccgacctgctgtctaagatgttgcttcta
atcttcactttcacatctttggctcggtggtgccccgtctggactcaggagccggagttt
gcagacgtgtgcacggagggcagctgctacccggccacaggtgacctgctgatcggtcga
gcgcacaaactcagggcctcctccacctgcggcctgactgggcccactcccttctgcatc
gtcggtcacctggaggaggaggagaaatgttttcagtgcgactcgaggcggatgtacgac
gaggagaccaacgacatcagccacaccatcgagaacgtggtcaccaccttcgcccccaac
cgcctgaagacctggtggcagtctgagaacggtgtggagaatgtcaccatccagctggac
ctggaggctgagtttcatttcactcacctcatcatgaccttcaagacctttcgtcctgct
gctatgatgatcgaacgctccatggactttgggaaatcctggcagatctaccgttacttt
gcctccaactgtgagacgtccttcccgggcatttctaccgggcccatggtcaaagtggac
gacatcatctgtgacacccgctactcagatatcgaaccgtccaccgagggagaagtgata
ttccgagtcctggaccccgcctttgagattgaagacccctacagtttgaggatacagaac
atgctgaagatcacaaacctgagggtgaagttcatcaaactctacacgctgggcgataat
ctgctggactcccgtgacgaggtgagagagaagtactactacgctctctacgacatggtc
gtccgtggaaactgcttctgctacggccacgcctcagagtgcgcccccattgacggagag
ccaagtggagctgaggggatggttcacggtcactgtgtgtgcaaccacaacacggagggg
ctgaactgtgagcgctgcaaggacttctatcaggatttaccatggaggcctgcagaggga
aaaaacacccacgcctgtaaaaagtgtgactgcaaccatcacgccacatcgtgccacttt
gacctcgccgtgttcatggcgaccggcaacgtgagcggcggcgtgtgcgacgactgccag
cacaacaccgtgggccggcagtgcgagcagtgcgcgcgcttcttctaccagcaccccagc
agaaacctgagagacccgaacatctgcgagccatgtgactgtgacccagacgggtcacta
gagggtgggatttgtgaccctcgaactgacgtggcggcggggctgatctcaggtcagtgt
cgctgcaaggccaacgtggagggagagcgctgcgacaactgtaggcggggctactacggc
ctgggagaaagccctgagggatgcctgtcgtgtacctgcaaccagctgggaacgatgccc
ggaggagcccactgtgactcagagacggggaaatgcatctgcaagaggctcgttgatgga
cacaactgtgatcagtgtctgccagagcactggggtctgtcaaatgacatggatggatgc
aggccatgtgactgtgatcacggcggagccgtcaacaacaactgtgaccccgactctgga
cagtgtgtgtgcagggagcacatgtttggacgccgctgcgaccaggttgagtccggcttc
tacttcatcgatctggatcactacacctatgaagctgaagacgccaagcatggacctggt
gtggcagtggtaccaaggccttatcctctcaaccggagcccaacatggactgggatgggc
tttgttaatgtgccagaaggagcgtatctagagttcaacgtcaacaacatcccagaatcc
atggactacgacatccttatccgctatgagccacagctgccacagcagtgggaacaggtt
gtcctccgggtggagcgtcctgttttcaatcccccaaaccgctctggtcactgcagcaac
tccatccagagtggagacgagcagtccatctctctgtcacctggatccagacatgtgttg
ctggtgagacctgtgtgctttgagaagggcctgaactacaccatccgcctcacgctgcca
ctgtactccacaaacagccacgtccaaaatccatacacgctcatcgactctctggtgctg
atgcctcgagtcaaggagcttgaaatgtttcatgggacaaagggtgaagcagagtgggat
actttccaaaggtaccgatgtctggagagcagcaggagtgtcatcaaaagccccatgacc
gacatctgtaaagattacatctttagcgtttctgctgtgctgcacaaaggagccatggcc
tgccagtgtgatcctcagggttctctcagcagcgtctgcgactccagtggaggtcagtgc
cggtgccgacccaacgttgttggcagaaactgtgaccactgtgctccggggaccttcctg
ttcagcccggccggctgcaggccttgcaactgtgaccccctgggctcggtcacagctttc
tgccacgagtttaccggcacatgccagtgtgcccctggagtcaccacccgccagtgttca
gagtgtctgccgggattctggggattccctcagtgccgaaagtgccagtgtaacggccac
agcgactactgccacccccagaccggggagtgcctggactgccgagacttcaccacggga
caccagtgtgagagatgcatgaatggttaccatggtaaccccgagctgggttcaggtgag
cgctgccgcccctgcatgtgtccggacgggcctcgcagcggcagacagttctctgacagc
tgctacttcctggccgaccccaaccacctggtgtgtgtgtgcagcagcgggtacaaaggc
agccgctgtgatgagtgtgctcctggttactatggaaaccctctgattcctggaggtcgc
tgtactgcctgtcagtgcaacaacaacatcgacatgcacgaccccaagtcctgcgactct
cgaacgggcgcctgcctcaaatgcctctaccacaccgagggccacgcctgccagcactgc
aaaccgggttactacggcaacgccaccacacggagctgcaccaagtgcatgtgttcgccc
tttgggacgatacccgaggcgtgttcatccggtgaggactgccggtgtgaccggcgcagc
ggccagtgcccctgccagcccaacgtggtgggtcagaactgcgaccgctgcgctccggac
acgtggggcctcagcagcaggaagggctgccagcgctgcgactgtgaccccatccactct
gtcgggtcttcctgcgacgaggcgacgggacagtgtgtttgcaagccgggcttcggtggg
aggacgtgtcgggagtgcagagagcttttctggggggatcctaaggtcaaatgtcacgct
tgtgactgtgacagccgtgggatctccagcggccagtgtgaccgcgccaccggacactgc
acctgcgtggagagcgcgtccggcccgcgctgcgaccagtgcgcccggggctactggggg
gagtttccggcctgcgagccctgccaccgctgcttctccgtgtgggacaatgttgtttcg
gagctgaccaatcaaacccgccgcctccaagcccaagtgacggagctccacagcatcagg
gtcacggcaccgtacaaggaactgatcggcagcctggagaggaacgccaaggcggtccga
gaaatactggagaacaaaactgcttcagcgaagatggaggcgattactgaggattcccat
gagatcattggactgctgtcccatctaagcggagtgatgaattccaccgaagagactttg
acttttatccgagacgatgcaaacatgacggaggcaaacttgaacgctctgaccgacgag
gccaaccagctggaggcgaacgttcaggagctgaggcagctcgtgcacaacatcaagaac
gccaacatccaaggcgcgatgagcaccatctctgctgcacacatggagtcgaccgcggcg
gagtggcgctccaaggcctccaccagctaccctggaagcaccgtgcaggagtccactgtg
ctacggaaaactgctgaggacaaacttagcaggagtcagaaagaatttgacaggaagcac
caaagaaacaatcggaagctggagaatctctcccaagagctggataagtttaacctaact
cgactcagcgagaaaatttgtggtggtgcggatgaggatctgggatgctcctcctgcggc
gggctgggctgcagcggggatgacggacagccccgctgtggaggagaagggtgcggcggc
ctcctctccacctcccaaagtgctctgacgtcagccgagaagctggagcagcagatccga
gcggcgatgcaggaggtggacgagctctccaggatggtgtgggaggccaacatccgcgcc
aaagaggccaaggagcgggcggtggaggcgcagaagaactcgaaccacagcaaagagagg
gtggagcggagcaaccagcagctccgcagcctgatcacggagatccgggacctgctgacc
aacgagaaggcggacgcgtccgtgatcgaggcggtcgccaacgaggttctggctctggag
atgccggcctccgcggagaagctgcaggagctgacgatggagatccgggagagggtcggc
gccctgaccagcgtggacgccatcctccgtcagagcgccgaggacatccggatggccgag
gcgctcctgaggcgcgccaaggaggccagtgagaacacttcagacatgaagaaggaagcc
gaggaggtgaaggaggctctggaggagacggagcgcgctcagaacaccgccaaggacgcc
atcctgctggctcgggacaacaccaaaggcacgttggacctgctggacacggtggagcag
gagaccgccgagtccgagctgcagctcagcaacaccacccgccgcctgctgcagctggag
agggaggtgggcctgctccggcagaacggcctagagatgagcaggttggtggacgacgcc
gagcagaagacccagtgggccaaggaggaggcggagcttgcagagcggaagtttgaagaa
gaggtgaaagaccaatttgaagaggtgaaggaacaggtggaggacagaggggaggcggtg
ctgcaggccaggaggagagcggatgagctgcagcgggaagctcgagagctgctggagcag
agcagcagcaagctgcagaggctgggagagttggaaatctcctacgaggccaaccagcga
atcctggaggagaaaaccgcagagctggaacagatggagcaaacggctcgccgcatcctg
gatgaaatcagccagaaggtgacgctgtacagcacctgcctgtga

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