Oryzias melastigma (Indian medaka): 112155259
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Entry
112155259 CDS
T07439
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112155259 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112155259 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
Alanine_zipper
F5_F8_type_C
LAMB1
Motif
Other DBs
NCBI-GeneID:
112155259
NCBI-ProteinID:
XP_024142549
Ensembl:
ENSOMEG00000023823
UniProt:
A0A3B3E1T3
LinkDB
All DBs
Position
LG23:complement(19244405..19277897)
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AA seq
1834 aa
AA seq
DB search
MVSLFSGSCRPAGGVELVGCRVSRRQLPPAPDFTLINSCWLTHQHLAAAVTDLLSKMLLL
IFTFTSLARWCPVWTQEPEFADVCTEGSCYPATGDLLIGRAHKLRASSTCGLTGPTPFCI
VGHLEEEEKCFQCDSRRMYDEETNDISHTIENVVTTFAPNRLKTWWQSENGVENVTIQLD
LEAEFHFTHLIMTFKTFRPAAMMIERSMDFGKSWQIYRYFASNCETSFPGISTGPMVKVD
DIICDTRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVKFIKLYTLGDN
LLDSRDEVREKYYYALYDMVVRGNCFCYGHASECAPIDGEPSGAEGMVHGHCVCNHNTEG
LNCERCKDFYQDLPWRPAEGKNTHACKKCDCNHHATSCHFDLAVFMATGNVSGGVCDDCQ
HNTVGRQCEQCARFFYQHPSRNLRDPNICEPCDCDPDGSLEGGICDPRTDVAAGLISGQC
RCKANVEGERCDNCRRGYYGLGESPEGCLSCTCNQLGTMPGGAHCDSETGKCICKRLVDG
HNCDQCLPEHWGLSNDMDGCRPCDCDHGGAVNNNCDPDSGQCVCREHMFGRRCDQVESGF
YFIDLDHYTYEAEDAKHGPGVAVVPRPYPLNRSPTWTGMGFVNVPEGAYLEFNVNNIPES
MDYDILIRYEPQLPQQWEQVVLRVERPVFNPPNRSGHCSNSIQSGDEQSISLSPGSRHVL
LVRPVCFEKGLNYTIRLTLPLYSTNSHVQNPYTLIDSLVLMPRVKELEMFHGTKGEAEWD
TFQRYRCLESSRSVIKSPMTDICKDYIFSVSAVLHKGAMACQCDPQGSLSSVCDSSGGQC
RCRPNVVGRNCDHCAPGTFLFSPAGCRPCNCDPLGSVTAFCHEFTGTCQCAPGVTTRQCS
ECLPGFWGFPQCRKCQCNGHSDYCHPQTGECLDCRDFTTGHQCERCMNGYHGNPELGSGE
RCRPCMCPDGPRSGRQFSDSCYFLADPNHLVCVCSSGYKGSRCDECAPGYYGNPLIPGGR
CTACQCNNNIDMHDPKSCDSRTGACLKCLYHTEGHACQHCKPGYYGNATTRSCTKCMCSP
FGTIPEACSSGEDCRCDRRSGQCPCQPNVVGQNCDRCAPDTWGLSSRKGCQRCDCDPIHS
VGSSCDEATGQCVCKPGFGGRTCRECRELFWGDPKVKCHACDCDSRGISSGQCDRATGHC
TCVESASGPRCDQCARGYWGEFPACEPCHRCFSVWDNVVSELTNQTRRLQAQVTELHSIR
VTAPYKELIGSLERNAKAVREILENKTASAKMEAITEDSHEIIGLLSHLSGVMNSTEETL
TFIRDDANMTEANLNALTDEANQLEANVQELRQLVHNIKNANIQGAMSTISAAHMESTAA
EWRSKASTSYPGSTVQESTVLRKTAEDKLSRSQKEFDRKHQRNNRKLENLSQELDKFNLT
RLSEKICGGADEDLGCSSCGGLGCSGDDGQPRCGGEGCGGLLSTSQSALTSAEKLEQQIR
AAMQEVDELSRMVWEANIRAKEAKERAVEAQKNSNHSKERVERSNQQLRSLITEIRDLLT
NEKADASVIEAVANEVLALEMPASAEKLQELTMEIRERVGALTSVDAILRQSAEDIRMAE
ALLRRAKEASENTSDMKKEAEEVKEALEETERAQNTAKDAILLARDNTKGTLDLLDTVEQ
ETAESELQLSNTTRRLLQLEREVGLLRQNGLEMSRLVDDAEQKTQWAKEEAELAERKFEE
EVKDQFEEVKEQVEDRGEAVLQARRRADELQREARELLEQSSSKLQRLGELEISYEANQR
ILEEKTAELEQMEQTARRILDEISQKVTLYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcttgttttctggatcttgccgccctgctggaggggtggagttggtgggatgc
agagtttccagaagacaactccctccagctcctgactttacgctcatcaacagttgctgg
ctgacccaccaacatctcgcagcagctgtaaccgacctgctgtctaagatgttgcttcta
atcttcactttcacatctttggctcggtggtgccccgtctggactcaggagccggagttt
gcagacgtgtgcacggagggcagctgctacccggccacaggtgacctgctgatcggtcga
gcgcacaaactcagggcctcctccacctgcggcctgactgggcccactcccttctgcatc
gtcggtcacctggaggaggaggagaaatgttttcagtgcgactcgaggcggatgtacgac
gaggagaccaacgacatcagccacaccatcgagaacgtggtcaccaccttcgcccccaac
cgcctgaagacctggtggcagtctgagaacggtgtggagaatgtcaccatccagctggac
ctggaggctgagtttcatttcactcacctcatcatgaccttcaagacctttcgtcctgct
gctatgatgatcgaacgctccatggactttgggaaatcctggcagatctaccgttacttt
gcctccaactgtgagacgtccttcccgggcatttctaccgggcccatggtcaaagtggac
gacatcatctgtgacacccgctactcagatatcgaaccgtccaccgagggagaagtgata
ttccgagtcctggaccccgcctttgagattgaagacccctacagtttgaggatacagaac
atgctgaagatcacaaacctgagggtgaagttcatcaaactctacacgctgggcgataat
ctgctggactcccgtgacgaggtgagagagaagtactactacgctctctacgacatggtc
gtccgtggaaactgcttctgctacggccacgcctcagagtgcgcccccattgacggagag
ccaagtggagctgaggggatggttcacggtcactgtgtgtgcaaccacaacacggagggg
ctgaactgtgagcgctgcaaggacttctatcaggatttaccatggaggcctgcagaggga
aaaaacacccacgcctgtaaaaagtgtgactgcaaccatcacgccacatcgtgccacttt
gacctcgccgtgttcatggcgaccggcaacgtgagcggcggcgtgtgcgacgactgccag
cacaacaccgtgggccggcagtgcgagcagtgcgcgcgcttcttctaccagcaccccagc
agaaacctgagagacccgaacatctgcgagccatgtgactgtgacccagacgggtcacta
gagggtgggatttgtgaccctcgaactgacgtggcggcggggctgatctcaggtcagtgt
cgctgcaaggccaacgtggagggagagcgctgcgacaactgtaggcggggctactacggc
ctgggagaaagccctgagggatgcctgtcgtgtacctgcaaccagctgggaacgatgccc
ggaggagcccactgtgactcagagacggggaaatgcatctgcaagaggctcgttgatgga
cacaactgtgatcagtgtctgccagagcactggggtctgtcaaatgacatggatggatgc
aggccatgtgactgtgatcacggcggagccgtcaacaacaactgtgaccccgactctgga
cagtgtgtgtgcagggagcacatgtttggacgccgctgcgaccaggttgagtccggcttc
tacttcatcgatctggatcactacacctatgaagctgaagacgccaagcatggacctggt
gtggcagtggtaccaaggccttatcctctcaaccggagcccaacatggactgggatgggc
tttgttaatgtgccagaaggagcgtatctagagttcaacgtcaacaacatcccagaatcc
atggactacgacatccttatccgctatgagccacagctgccacagcagtgggaacaggtt
gtcctccgggtggagcgtcctgttttcaatcccccaaaccgctctggtcactgcagcaac
tccatccagagtggagacgagcagtccatctctctgtcacctggatccagacatgtgttg
ctggtgagacctgtgtgctttgagaagggcctgaactacaccatccgcctcacgctgcca
ctgtactccacaaacagccacgtccaaaatccatacacgctcatcgactctctggtgctg
atgcctcgagtcaaggagcttgaaatgtttcatgggacaaagggtgaagcagagtgggat
actttccaaaggtaccgatgtctggagagcagcaggagtgtcatcaaaagccccatgacc
gacatctgtaaagattacatctttagcgtttctgctgtgctgcacaaaggagccatggcc
tgccagtgtgatcctcagggttctctcagcagcgtctgcgactccagtggaggtcagtgc
cggtgccgacccaacgttgttggcagaaactgtgaccactgtgctccggggaccttcctg
ttcagcccggccggctgcaggccttgcaactgtgaccccctgggctcggtcacagctttc
tgccacgagtttaccggcacatgccagtgtgcccctggagtcaccacccgccagtgttca
gagtgtctgccgggattctggggattccctcagtgccgaaagtgccagtgtaacggccac
agcgactactgccacccccagaccggggagtgcctggactgccgagacttcaccacggga
caccagtgtgagagatgcatgaatggttaccatggtaaccccgagctgggttcaggtgag
cgctgccgcccctgcatgtgtccggacgggcctcgcagcggcagacagttctctgacagc
tgctacttcctggccgaccccaaccacctggtgtgtgtgtgcagcagcgggtacaaaggc
agccgctgtgatgagtgtgctcctggttactatggaaaccctctgattcctggaggtcgc
tgtactgcctgtcagtgcaacaacaacatcgacatgcacgaccccaagtcctgcgactct
cgaacgggcgcctgcctcaaatgcctctaccacaccgagggccacgcctgccagcactgc
aaaccgggttactacggcaacgccaccacacggagctgcaccaagtgcatgtgttcgccc
tttgggacgatacccgaggcgtgttcatccggtgaggactgccggtgtgaccggcgcagc
ggccagtgcccctgccagcccaacgtggtgggtcagaactgcgaccgctgcgctccggac
acgtggggcctcagcagcaggaagggctgccagcgctgcgactgtgaccccatccactct
gtcgggtcttcctgcgacgaggcgacgggacagtgtgtttgcaagccgggcttcggtggg
aggacgtgtcgggagtgcagagagcttttctggggggatcctaaggtcaaatgtcacgct
tgtgactgtgacagccgtgggatctccagcggccagtgtgaccgcgccaccggacactgc
acctgcgtggagagcgcgtccggcccgcgctgcgaccagtgcgcccggggctactggggg
gagtttccggcctgcgagccctgccaccgctgcttctccgtgtgggacaatgttgtttcg
gagctgaccaatcaaacccgccgcctccaagcccaagtgacggagctccacagcatcagg
gtcacggcaccgtacaaggaactgatcggcagcctggagaggaacgccaaggcggtccga
gaaatactggagaacaaaactgcttcagcgaagatggaggcgattactgaggattcccat
gagatcattggactgctgtcccatctaagcggagtgatgaattccaccgaagagactttg
acttttatccgagacgatgcaaacatgacggaggcaaacttgaacgctctgaccgacgag
gccaaccagctggaggcgaacgttcaggagctgaggcagctcgtgcacaacatcaagaac
gccaacatccaaggcgcgatgagcaccatctctgctgcacacatggagtcgaccgcggcg
gagtggcgctccaaggcctccaccagctaccctggaagcaccgtgcaggagtccactgtg
ctacggaaaactgctgaggacaaacttagcaggagtcagaaagaatttgacaggaagcac
caaagaaacaatcggaagctggagaatctctcccaagagctggataagtttaacctaact
cgactcagcgagaaaatttgtggtggtgcggatgaggatctgggatgctcctcctgcggc
gggctgggctgcagcggggatgacggacagccccgctgtggaggagaagggtgcggcggc
ctcctctccacctcccaaagtgctctgacgtcagccgagaagctggagcagcagatccga
gcggcgatgcaggaggtggacgagctctccaggatggtgtgggaggccaacatccgcgcc
aaagaggccaaggagcgggcggtggaggcgcagaagaactcgaaccacagcaaagagagg
gtggagcggagcaaccagcagctccgcagcctgatcacggagatccgggacctgctgacc
aacgagaaggcggacgcgtccgtgatcgaggcggtcgccaacgaggttctggctctggag
atgccggcctccgcggagaagctgcaggagctgacgatggagatccgggagagggtcggc
gccctgaccagcgtggacgccatcctccgtcagagcgccgaggacatccggatggccgag
gcgctcctgaggcgcgccaaggaggccagtgagaacacttcagacatgaagaaggaagcc
gaggaggtgaaggaggctctggaggagacggagcgcgctcagaacaccgccaaggacgcc
atcctgctggctcgggacaacaccaaaggcacgttggacctgctggacacggtggagcag
gagaccgccgagtccgagctgcagctcagcaacaccacccgccgcctgctgcagctggag
agggaggtgggcctgctccggcagaacggcctagagatgagcaggttggtggacgacgcc
gagcagaagacccagtgggccaaggaggaggcggagcttgcagagcggaagtttgaagaa
gaggtgaaagaccaatttgaagaggtgaaggaacaggtggaggacagaggggaggcggtg
ctgcaggccaggaggagagcggatgagctgcagcgggaagctcgagagctgctggagcag
agcagcagcaagctgcagaggctgggagagttggaaatctcctacgaggccaaccagcga
atcctggaggagaaaaccgcagagctggaacagatggagcaaacggctcgccgcatcctg
gatgaaatcagccagaaggtgacgctgtacagcacctgcctgtga
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integrated database retrieval system