Oryzias melastigma (Indian medaka): 112155265
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Entry
112155265 CDS
T07439
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00100
Steroid biosynthesis
oml01100
Metabolic pathways
Module
oml_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112155265 (lss)
Enzymes [BR:
oml01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
112155265 (lss)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
DUF7374
Motif
Other DBs
NCBI-GeneID:
112155265
NCBI-ProteinID:
XP_024142556
Ensembl:
ENSOMEG00000021872
LinkDB
All DBs
Position
LG21:10813198..10823236
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AA seq
742 aa
AA seq
DB search
MLLGRVLKSSFRHLRRRGGPYKTEPATDLSRWRLTNVEGRQTWSYVEEQDTPDREQTMLE
AFSLGLDTSKFVSDSPAALTASDAALKGMHFYSLLQAEDGHWAGDYGGPLFLLPGLLITS
HVAQIPLPEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYVSLRILGVDADDPD
LVRARNNLHDKGGAVGIPSWGKFWLAILNVYSWEGINTLLPEMWLFPTWMPAHPSTLWCH
CRQVYLPMSYCYAVRLKAQEDSLVLSLRQELYVQDYATINWPAQRNNVAPCDLYTPHSTL
LTVAYMVLNFYEAHHSAALRKMAVKELYDHIQADDRFTKCISIGPISKTINMLVCWYVDG
ASSPAFQEHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAYLEAGGQNDSRLANCLH
EAHRFLNITQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCP
FIKDHIPSERLYDAVNVLLSMKNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVE
CTSAVMQALRHFQKVYPDHRAEEISSTLHEGLEYCRRVQRPDGSWEGSWGVCFTYGIWFG
LESFACMGHTYKQDGVCEEVQKACQFLLDRQMSDGGWGEDFESCEQRRYVQSSAAQIHNT
CWALLGLMAVRHPNREAIERGVQLLIDKQLPNGDWPQENIAGVFNKSCAISYTSYRNVFP
IWTLGRYSRLYPNNQLAGKMKL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgggtagagtcctaaaaagcagtttcagacacctgaggaggagaggaggacct
tacaagacagaaccagccacagacctgagccgctggaggctgactaatgtagaaggcaga
cagacgtggagctacgtggaggaacaggacactccagacagagagcagaccatgctagaa
gcatttagtcttggcctagacactagcaagtttgtttctgacagtccagctgccctcact
gcctctgatgctgctctgaaaggtatgcacttctacagtctactccaggctgaagacggt
cactgggctggggactatggtggacctctcttcctgttgccaggcctccttataacaagt
catgtggctcagatccctttgcctgaagcctggaagaaagagatggtgagatacctccgc
tcggttcagctgccagatggaggctggggtctacatatagaggataagtctaccgttttc
ggcactgcactgagttatgtatccctgagaatcctgggagtggatgctgatgatccggat
ttggttcgtgccagaaacaacctgcatgacaaaggtggtgctgttggaattccctcttgg
ggtaaattctggttggccattttaaatgtctacagttgggaaggaatcaacacgttacta
ccagagatgtggttgtttcctacctggatgccagcccacccttctacactgtggtgtcac
tgccgccaagtctaccttcccatgagctactgttacgctgtcagactcaaagcacaggag
gactccctcgttcttagcctcagacaggagttgtatgttcaggattatgctaccatcaac
tggcctgctcagaggaacaatgtggcaccatgtgacctatacacgcctcacagcacactg
ctaactgtcgcctacatggtgttgaacttttatgaagctcatcacagtgctgcactaaga
aaaatggcggtcaaagaattatacgaccacatccaggctgatgaccgcttcacaaagtgc
atcagcatcggaccgatttccaagactatcaacatgctggtttgctggtatgtggatggt
gcttcttcaccagcctttcaggaacacgtgtccagaatacccgactatctctggttgggg
ttagatggcatgaaaatgcagggaacaaatggatctcagctctgggacacttgttttgct
gtacaagcgtaccttgaggcaggaggtcagaatgacagcaggttagccaactgtcttcat
gaggcccatcgctttctcaacatcacacagatacccgataatcctccagaataccaaaaa
tactacaggcagatgaacaagggaggcttccccttcagtacccgtgactgtggctggatt
gtagctgactgcacagcagagggactgaagtcagtgatgctgctgcaggagctctgtccc
ttcatcaaagatcatatcccctcagagcgtttgtatgatgctgtcaatgtgctgctgagc
atgaaaaattcagatggtggatttgctacctatgaaactaagagaggagggagactcttg
gagctgctgaatccctctgaggtgtttggagacattatgattgattacacatatgtggag
tgtacttcagcagtgatgcaagctctgaggcacttccagaaggtttacccagatcaccgt
gcagaagagataagctcaactctgcatgaggggctggagtactgcaggagggttcaaaga
cctgatggatcctgggaaggatcttggggagtttgtttcacgtatggaatctggttcggg
ctggaatcttttgcgtgcatgggacacacttacaaacaagatggtgtgtgtgaggaggtg
cagaaagcttgtcagtttctgctggaccggcagatgtcagatggaggatggggggaagac
tttgagtcatgcgagcagcggcgctacgtccaaagcagtgctgcacagatacacaacacc
tgctgggctttgttggggctaatggctgttaggcatccaaacagagaggccattgagaga
ggagttcaattactgattgacaagcagctgcccaatggagactggcctcaggaaaatatt
gctggtgtttttaacaagagttgtgccatcagctacacatcctacagaaacgtttttccg
atctggaccctcggccgctactcacggctttaccccaataatcagttggctggaaagatg
aagctgtaa
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