Oryzias melastigma (Indian medaka): 112155266
Help
Entry
112155266 CDS
T07439
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112155266 (eri1)
03036 Chromosome and associated proteins [BR:
oml03036
]
112155266 (eri1)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112155266 (eri1)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
112155266 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
CHASE6_C
Motif
Other DBs
NCBI-GeneID:
112155266
NCBI-ProteinID:
XP_024142560
Ensembl:
ENSOMEG00000023826
LinkDB
All DBs
Position
LG23:19238591..19244398
Genome browser
AA seq
341 aa
AA seq
DB search
MEEQKENIHTKDLNVQMSKAKEDEKEKAGTKKSPDGESDPPESPSQPNGDFSHPVYKEIA
LANGHINRMSKRELQVKLAELKLDTRGVKDVMKKRLKSHYRKQKLMTSAAEGGPTDTYYD
YICVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLQIVDSFQSYVKPELNPKLSDFCVT
LTGITQKMVDEADPFPDVLQRVVTWLQERDLGTKHKYAILTDGSWDMSKFLNIQCRVSRI
RYPQFAKKWINIRKSYGNFYKLPRSQTKLSTMLEKLGMKYEGRPHCGLDDSRNIARIAVR
MLQDGCQLRVNERMHAGQLLSVPSSAPVEGAPPPHNPGSRN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaaaaggagaacattcacacgaaagacctcaacgtgcaaatgtcgaaggca
aaggaagacgagaaggagaaagccggcaccaaaaagagtcctgacggagagtctgatcct
ccagagtcgccctcacagcccaacggtgacttcagccatccggtctacaaagagatcgct
ttggcaaacggacacatcaaccgcatgtccaagagggagctgcaggtcaaactggccgag
ctgaagctggacaccagaggcgtgaaggacgtgatgaagaagaggctgaagagccactac
aggaagcagaagctgatgacgtcggcagcagagggaggccccaccgacacctactacgac
tacatctgtgtggtggactttgaggcgacgtgtgaggaggataatccctcagacttcctc
catgaaatcatcgagttccccatggttctcatcaacactcacaccctgcagatcgtggac
tcgtttcagtcgtacgtgaaaccagagttgaaccccaaactctccgacttctgcgtcacg
ttaacgggaatcactcagaaaatggtggacgaagccgatccgttccctgacgtcctgcag
cgggtcgtgacttggcttcaggagagagatctggggaccaaacacaaatacgccattctg
acagacgggtcctgggacatgagcaagttcctcaacatccagtgtcgggtcagccgcatc
cggtatcctcagtttgcaaagaagtggataaacatcaggaaatcctacggcaacttctac
aagctgccgcgctcgcagacgaagctgagcaccatgctggagaagctgggcatgaagtac
gagggccgccctcactgcggcctggacgactcgcgcaacatcgcccgcatcgccgtgcgc
atgctgcaggacgggtgtcagctgcgcgtcaacgagcgcatgcacgctggccagctgctg
tccgtgcccagctcggcgccggtggaaggagcccccccaccccacaaccccggcagcaga
aactag
DBGET
integrated database retrieval system