Oryzias melastigma (Indian medaka): 112155281
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Entry
112155281 CDS
T07439
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155281 (trappc10)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112155281 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_14
TPR_12
SNAP
TPR_1
TPR_7
TPR_8
TPR_19
Motif
Other DBs
NCBI-GeneID:
112155281
NCBI-ProteinID:
XP_024142575
Ensembl:
ENSOMEG00000015813
LinkDB
All DBs
Position
LG21:complement(7061201..7080119)
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AA seq
1264 aa
AA seq
DB search
MECQEERPIIYTMENKPIVTCAGDHNLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEAYKSSVKEDMLRWHNSLRTHGSAD
WVIIVVESNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRNWSGLLLRRPIDMEKRDSIQRGEA
SLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVDGALDCWVFLS
CLEVLHRIEGCCDQAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRVRSARLV
GKSLAEFYMRKGDPEKAETFLQEALKSYLSEGWSLPVTHTRRQIAECQKLLDRKEDYLQT
SALLAGDLNLSTEERKHFCQEILNFAGKPGNPSHKATLSMSVFAQLTQLQFHPASASVHS
GAVLMVELTLRCLMPISVHIQQLAASIHFDVDHGGTHGRTKRAQRQTNQGVIEFKLGNSL
SGLPSSAAPGPSLELDEVQDRSPSDNSLNSTGVVCKNTHLLMRHHEGTSPPDTLNCVSPP
TVTMKEGAQMLKVQDVTLAPGNNSIVFTAPSGEPGTYTLRQLCATVGEVQFVLSHIYPSV
RYEVYSQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYTVKKGDALQLSNAETLPILPSSS
CTARISSPTAELVSESTLSIQSSEKVTSISLPPTPPYHLLEFQLEVVCVIPSGSERPANE
RLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAGN
RKYIQVCVQNVSDVSFTLAEVKLTEKQHASLELQSLNTKTHQLLCSKHSVFCLWEVRWKD
ELPSCMQCVFSANFSPLSQDTSAFKPFHYQFQLERVTTLYSVRAEISPPAGEQHCRSGLL
CGLEVCITRLTEPAEGEIAEESKTEPDGFKITKLMYEVADSSSNWAVCGKSSGMVLMPMK
VNATHKVHIEVMPLFAGHLPYPKIKVLRYLPHTAAVAIQPDPDSCVENDSLSLLDKTLDD
QADTASIRSRGSVHSVGSGDQQQRGVAMPRLEAFSPGQVFNHSHTQQVLVLPATDDHIME
VNAT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaggccaatcatctataccatggaaaacaagccgattgtaaca
tgtgcaggagatcacaacttattcacatctctgtatacatcattggctcaacaacttccc
agggagccaatggagtggaggaggacttacggccgtgcaccaaaaatgattcacctcgaa
gctaattttgtccagtttaaagaggaactgctcccaaaggagggcaacaaggctcttctc
acctttccctttctccacatctactggaccgactgctgtgacacagaggcttataagagc
tccgtaaaagaggacatgctgcgctggcacaacagcctgcggacccacgggtcagcagac
tgggtcatcatcgtcgtcgagtccaatgacaccaagaagaaaaacaaaaccaacatcctt
cctcggtcttccattgtggacaagatccgcagtgacttctgtaacaaacagaatgacagg
tgtgtggtgctgtccgaccctctgaaggactcgtcccggtcacaagagtcctggaactct
ttgctgctgaaattgagaaccctcctcctcatgtccttcacgaagaacctgggccgcttt
gaagatgacatgcgcacgctccgagagaaacgcacccagcctggctggagcttctgcgag
tacttcatggtccaggaggagctggcctttgtgtttgagatgctgcagcagtttgaggac
gctctggtccagtacgatgaactagatgctctttttacccagtatgttcttaactttgga
gcaggagacacagccaactggctgggctcattctgcgctccagtccgtaactggagtggt
ttgcttctccgtcgccccatcgacatggaaaagagggatagtatccaacgcggagaagcc
agcctgttggatctgaggagctacctgttctcccgtcagtgcactttactcatcttcctc
cagagaccctgggaagtcacgcagagggccttagagcttctccacaactgtgtgcaggag
ttgcgtctgctggaggtgtccgtcgtggatggcgctctggactgctgggtgttcctcagc
tgcttggaggttcttcataggatcgagggctgctgcgatcaggcccagttagctgcaaac
tgttctcatactgtcggcctttgggcctacgctacagataagctgaagagtctgggggaa
ctctgtggtctggtatcagagaagggacccacatctgaagacctgaacaggactgttgat
ctgctcgcaggtttaggagacgagcggcctgagactgtcaacagtttacagagcccctac
aaaaagttgaaagaagctttatcatctgtggaagcttttgaaaggcactatcttgaactc
tctcatgctgcaatggaaatgtatcgggccatcggccgggtgcgctcggccagactggtg
gggaaaagtttggctgagttctacatgagaaaaggggacccagagaaagctgaaactttt
cttcaagaggctttgaagtcctacctgtcagaggggtggagcctccctgtgactcacacc
aggagacagatcgctgaatgtcagaaactgctggacagaaaggaggactacttgcaaacc
agtgccttgttggcaggtgatttgaacctgagcactgaagaaagaaagcacttttgccag
gaaatcctaaactttgcagggaagcctggaaatccttctcacaaagccactctcagcatg
agtgtttttgctcagctcacgcagctccagtttcacccggcgtctgcgtcggttcactcc
ggcgctgtcctgatggtggagctcactctgagatgcttaatgcccatttcagttcacata
cagcaacttgctgctagcatccactttgatgtggatcacggagggactcacgggaggacc
aagagagctcagagacagaccaaccaaggggtaatcgagttcaagctggggaactcttta
tcaggccttccctcctccgcggcgccgggcccctcgttagagctggatgaggttcaggac
aggagtccttcagacaattctctcaactccacaggagtggtctgtaaaaacacccacctg
ctcatgcgccaccatgagggcacttctcctcctgacaccctcaactgtgtcagcccccca
actgttacgatgaaggaaggagcacagatgctgaaggtgcaggatgtaaccctggcgcct
ggaaacaacagcatcgtctttacagcacctagcggagaaccaggcacttacacgctgcgg
cagctgtgtgccacggttggagaggtgcagttcgtcttgtctcatatctacccatcggtc
cggtatgaagtgtactctcaggagccccagctcaccgtggagccgctctcagaacccctc
ctggccggtctgcctcagatggtgaagttcactctgctgacaggtcactacactgtgaaa
aagggagatgctctgcagctcagcaacgcagagaccctgcccatcctgccctccagcagc
tgcaccgcccgcatcagcagccccactgctgagttggttagcgaaagcactctgtccatt
cagtcgtctgaaaaggtgaccagcatcagcctacctccaacccctccgtaccacctcctg
gagttccagctggaagttgtgtgcgtcatcccgtccgggtcagaacggcccgctaacgag
agactgacgaacggggaggtccgtcatcgaccgcgcagctacagccatccagacacaccc
atgactgccattgaccagaggatgtctatcgactgtccatggtccatctactccacacta
cttgctctcaccttctatatccccttcaagaccaaacactcgctgctttctgctggtaac
agaaagtacatccaggtgtgtgtgcagaacgtgtcggatgtgagcttcactctggcagag
gtgaagctgacagaaaagcagcacgcatcgctggagctacagtctcttaacactaaaaca
catcagctcctgtgcagtaaacacagcgtgttctgcttgtgggaggtgagatggaaggat
gaactgccctcctgcatgcagtgcgttttctccgccaacttctctccgctcagccaggac
acctctgccttcaaacctttccactaccagttccagctggagagagtcactacattgtac
agtgttagagcggagatctccccccctgctggggagcagcactgccgctccggtctcctc
tgtggactggaggtgtgcataacccgactgaccgagcctgcagagggagagatagctgag
gagagcaaaactgaacccgacggcttcaaaatcaccaaactcatgtatgaagtggcggac
agcagcagtaactgggccgtgtgtgggaagagttcaggaatggtgttaatgccaatgaag
gtcaacgctacgcacaaggttcacattgaggtaatgcctctgttcgccggacacctcccc
taccccaagatcaaagtgctgagatacctgccccacactgctgccgtggccatccaacca
gacccagacagctgtgtggagaacgacagcttgtccttgcttgacaaaacgctggacgac
caggcggacacggcgagcatccgcagtcgcggtagcgtccattccgttggcagcggagac
cagcagcagaggggagtggccatgccccgcctggaggccttcagtcccgggcaggtgttc
aaccacagccacacccagcaggttctggtgctgcccgccacagacgaccacatcatggag
gtgaacgccacatga
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