Oryzias melastigma (Indian medaka): 112155331
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Entry
112155331 CDS
T07439
Symbol
rubcnl
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer isoform X2
KO
K25948
protein associated with UVRAG as autophagy enhancer
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155331 (rubcnl)
Membrane trafficking [BR:
oml04131
]
Autophagy
Other autophagy associated proteins
Others
112155331 (rubcnl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
112155331
NCBI-ProteinID:
XP_024142640
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Position
LG21:504842..527703
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AA seq
720 aa
AA seq
DB search
MMGSSSGGSSCPSTGSFVAWFVDSADPTVPGPLTDASPLQDFPEKNQGAASSSKTPLLLL
SPPETCRGDDSTFPIKSPQGTFSRRNALRRCRPGLLQTDSHSPPKHTEKERKSDKSERNQ
NIFFSSEKEPKSPGGGNLLLPRSSPVLSRRPRPLSWHGRRSPPADPSSLDLLSSSGSASL
KASSAENLGSKVRSSRCTFLVQVDEDRNSISSSDHNSLLSSHSQPGSVDGDTRQIFERLG
NEDGCTSSSCDRERAFSGVSDFTADIFRACCELEKENAHFIVVDMLMEVLEGAKWTLSFD
QRTALMEKHQNTEQDPQNHTSSAQHCPPHKQNCRTHRHTQDRSKHDGEPERPSGDQPTEG
KDDRESRKMKPEQPKMCSVLSTDSGFEDCGLDITATSTESDRNSAEYLAQRLVSQFKRKW
LPAHKLWRGRQSLRSSLQELPGTEGVVSSRGSLAEEIQMRTRMRGSLTWAPPCFQIIFTL
HPAHRRSEMVALQNFLCAGCGTEVEPRYIKKLRYCEYLGRYFCDCCHSGSEAVIPARILS
CWDFSRYSVSDFSKHLLDSVRHEPLFDLTCVGTTLCSRVKELSKFRDLQEQLMGIKKLLK
ACRFSGRVLAEFDQFPAHLTESALFFSLNDLLMAKKGQLVAPARALMLSAVSHVESCELC
LSRGFICEFCRQKDVIFPFQRNICKRCKECRACFHKHCFMGRNCPKCARIQSRSKVQMRP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagctccagcggggggtcgtcttgtccctccacgggctcgtttgtcgcttgg
tttgtggattctgcagacccaaccgtccctggacctctgacggatgcatcaccactacaa
gactttcctgagaagaaccagggtgcagctagttccagtaagacaccacttctccttctg
tcacctcctgaaacctgcagaggagacgatagcacatttcccataaaaagccctcagggg
actttctcgagaagaaacgccctcagacggtgccggcccggcctgctgcagacagactcg
cacagtcctccaaaacacaccgaaaaagaaagaaaaagcgacaaatctgagagaaatcaa
aacattttcttcagctctgaaaaggagccaaagtctcctggaggtggaaacctcctccta
ccgaggagcagtccagtcctttccaggaggcccagacccctctcctggcatgggaggagg
agtccacctgcagatccatcaagcttggaccttctctcgtcttcaggctctgcatcattg
aaagccagcagtgcggagaatctgggatccaaagtgagatccagcagatgcacgttccta
gtccaggtggatgaagatcggaacagcatcagctcatcagatcacaacagcctcctcagc
agccacagtcagccaggatcggttgatggggacaccaggcagatctttgagagactcggg
aatgaagacggctgcacgtcgtcgtcatgtgacagagaacgggctttcagcggcgtctca
gattttactgcagacatatttagggcctgctgcgagctggaaaaggaaaatgctcatttc
atcgtggtggacatgctcatggaggttctggaaggagcaaagtggactctaagctttgat
cagaggacagccctgatggagaagcaccaaaacacagaacaagacccgcagaaccacaca
agctctgcacagcactgtccaccacacaaacagaactgtagaacacacagacacacacag
gaccgcagcaaacatgacggagaaccagagagaccgtccggagatcagcccacagaggga
aaagatgacagagaatccaggaaaatgaaaccagaacagcctaaaatgtgctcagtcctc
tccactgacagcggatttgaagactgtggattagacataactgcgacgtcaacagagtct
gacagaaacagtgcagagtatctggcccagcggctggtctcccagttcaagaggaaatgg
ctcccagcacacaaactctggagaggtcgacaaagtctccgcagctccctccaggagctc
ccaggcactgaaggagtggtgagcagcagaggcagcctggcagaggagatccagatgagg
accaggatgagaggatctctgacgtgggctccaccgtgtttccagatcatcttcactctt
catccagcacacagacgcagtgaaatggtggctttgcagaacttcctgtgcgcgggttgt
gggacagaagtggagcccagatacatcaagaaactgcggtactgtgaatatctcggcagg
tatttctgtgactgctgtcacagtggctctgaggctgtgattcctgctcgtattctgtcc
tgctgggacttcagcaggtactctgtgagcgatttctccaaacacctgttggattcggtg
aggcacgagcctctctttgacctgacctgtgtgggaacgacgctctgcagccgagtgaaa
gagctcagcaagttcagggatctgcaggaacagctgatgggcatcaagaagctgctgaag
gcctgcagattctccggaagggtgttggccgagtttgaccagttcccagctcacctgacg
gagtcggcgctcttcttctccctgaacgaccttctgatggcgaagaaggggcagctggtg
gcgccggccagagcgctgatgctgtctgccgtcagtcacgtggaaagctgtgagctttgc
ttgtcccgaggattcatctgtgaattctgccggcaaaaagacgtcatctttccgtttcag
aggaacatttgtaaacgctgcaaagagtgcagagcatgctttcacaagcactgcttcatg
gggagaaattgcccaaaatgtgcacggatccagtcccgcagtaaagtccagatgcgtcct
tga
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integrated database retrieval system
