KEGG   Oryzias melastigma (Indian medaka): 112155406
Entry
112155406         CDS       T07439                                 
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
  KO
K09303  homeobox protein HoxA/B/D3
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oml03000]
    112155406 (hoxd3a)
Transcription factors [BR:oml03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    112155406 (hoxd3a)
SSDB
Motif
Pfam: DUF4074 Homeodomain Homeobox_KN DUF7255
Other DBs
NCBI-GeneID: 112155406
NCBI-ProteinID: XP_024142772
Ensembl: ENSOMEG00000004819
LinkDB
Position
LG21:19376519..19395249
AA seq 399 aa
MQKATYYDNSGLFGGYSYPKPDSYSYGPAHQSYPTATIESDYQGPVCPIQTSAVRPPALK
DTDLNGDCMRQSSSQSGNNGAQAGSISEQQAPPLSASPPSSNSSASQKKKSPSGGASGAT
TPALAKQIFPWMKETRQNAKQKSNNCVAAGGEVSDEKSPPGPASKRVRTAYTSAQLVELE
KEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGLAHSPLGHSPDRS
PPLSGPNHVGYSGQLQNVNSLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPG
SEYEHHGMQSNGGFANPNLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSTSVDYSCAA
QIPGNHHHGPCDPHPTYTDLTSHQASQGRIQEAPKLTHL
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgcagaaagcaacttattacgacaactctggactgtttgggggctacagctaccccaaa
ccagactcgtacagctacggccccgcacaccagtcctaccccactgctaccattgagagt
gactatcagggcccagtgtgtcccatccagacctcagcggttcggcccccggccctcaaa
gacactgatttgaacggagactgcatgcgccaaagcagcagtcaaagtggcaacaatggc
gcgcaagcggggagcatttcagagcagcaggcgcctccactgtccgcgtccccgccaagc
tccaacagctctgcgtcccagaagaagaagtccccctccggtggagcctccggggccacc
acacccgccctggcgaagcagatcttcccctggatgaaggagacccggcagaacgcaaag
cagaaaagcaacaactgtgttgcggcaggtggggaggtgagcgatgagaaaagcccaccg
ggaccggcctccaaacgggtcagaactgcttacacgagtgcacaactggtggagctggag
aaggagtttcactttaaccgctacctttgtcgtccccggagagtggaaatggccaatctg
ttgaatctcaccgagcgccagataaagatttggtttcagaaccggaggatgaaatacaaa
aaggaccagaagtctaaagggctcgcgcactctcccttgggacactccccggacaggagc
ccaccgctgagtggcccaaatcacgttggatactctggccaactccagaacgtcaacagc
ctcagctatgacgcgccctcgcccccgtcattcgccaagccgcagcaaaacatgtacggc
ctggcagcgtacaccgcgccgctgggaggctgcatcccgcaacagaagaggtacccgggc
tccgagtacgaacaccacggcatgcagagcaatggaggctttgccaatcccaatttgcaa
ggcagccccgtttatgtgggtgggaactttgttgattccatgccagcctcgggccccatg
ttcaacctcggccatcttccccacccctcatccaccagcgtggactacagctgcgccgcg
cagatcccaggaaaccaccaccatggaccctgtgatccccaccccacatacacagacctc
acctctcaccaagcgtctcagggaaggattcaggaagcgcctaaactgacgcatttgtaa

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