Oryzias melastigma (Indian medaka): 112155406
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Entry
112155406 CDS
T07439
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112155406 (hoxd3a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112155406 (hoxd3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
112155406
NCBI-ProteinID:
XP_024142772
Ensembl:
ENSOMEG00000004819
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Position
LG21:19376519..19395249
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AA seq
399 aa
AA seq
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MQKATYYDNSGLFGGYSYPKPDSYSYGPAHQSYPTATIESDYQGPVCPIQTSAVRPPALK
DTDLNGDCMRQSSSQSGNNGAQAGSISEQQAPPLSASPPSSNSSASQKKKSPSGGASGAT
TPALAKQIFPWMKETRQNAKQKSNNCVAAGGEVSDEKSPPGPASKRVRTAYTSAQLVELE
KEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGLAHSPLGHSPDRS
PPLSGPNHVGYSGQLQNVNSLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPG
SEYEHHGMQSNGGFANPNLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSTSVDYSCAA
QIPGNHHHGPCDPHPTYTDLTSHQASQGRIQEAPKLTHL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcaacttattacgacaactctggactgtttgggggctacagctaccccaaa
ccagactcgtacagctacggccccgcacaccagtcctaccccactgctaccattgagagt
gactatcagggcccagtgtgtcccatccagacctcagcggttcggcccccggccctcaaa
gacactgatttgaacggagactgcatgcgccaaagcagcagtcaaagtggcaacaatggc
gcgcaagcggggagcatttcagagcagcaggcgcctccactgtccgcgtccccgccaagc
tccaacagctctgcgtcccagaagaagaagtccccctccggtggagcctccggggccacc
acacccgccctggcgaagcagatcttcccctggatgaaggagacccggcagaacgcaaag
cagaaaagcaacaactgtgttgcggcaggtggggaggtgagcgatgagaaaagcccaccg
ggaccggcctccaaacgggtcagaactgcttacacgagtgcacaactggtggagctggag
aaggagtttcactttaaccgctacctttgtcgtccccggagagtggaaatggccaatctg
ttgaatctcaccgagcgccagataaagatttggtttcagaaccggaggatgaaatacaaa
aaggaccagaagtctaaagggctcgcgcactctcccttgggacactccccggacaggagc
ccaccgctgagtggcccaaatcacgttggatactctggccaactccagaacgtcaacagc
ctcagctatgacgcgccctcgcccccgtcattcgccaagccgcagcaaaacatgtacggc
ctggcagcgtacaccgcgccgctgggaggctgcatcccgcaacagaagaggtacccgggc
tccgagtacgaacaccacggcatgcagagcaatggaggctttgccaatcccaatttgcaa
ggcagccccgtttatgtgggtgggaactttgttgattccatgccagcctcgggccccatg
ttcaacctcggccatcttccccacccctcatccaccagcgtggactacagctgcgccgcg
cagatcccaggaaaccaccaccatggaccctgtgatccccaccccacatacacagacctc
acctctcaccaagcgtctcagggaaggattcaggaagcgcctaaactgacgcatttgtaa
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