Oryzias melastigma (Indian medaka): 112155449
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Entry
112155449 CDS
T07439
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112155449
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112155449
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112155449
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112155449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
112155449
NCBI-ProteinID:
XP_024142843
Ensembl:
ENSOMEG00000016910
UniProt:
A0A3B3CE61
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All DBs
Position
LG21:complement(27971503..27980406)
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AA seq
841 aa
AA seq
DB search
MASIQQPEVLLAQRLASNEKPVRTKALRKLKKYISAREGAAGGLSAEELLKLWKGLFYCV
WMQDKPLLQEELSSQISNLIHSFQNPHKQLLYLQSFLETMKREWTGIDRLRMDKFFQLIR
FMFRQTFEALKRSSWESGAVTGFLELLGSQLLQSDSGAPSGLQLHVLELYLTELAAVGSA
ELTADQNLTFIDPFCRTVAKTKNQMLFGAICSRIFSPIIDQAPFAVEDLMREVSQAEDSE
EDEGGQETQSGRSRGKLVNGKGSSDGVDEEEELLHSELDSQLSGDEDIGPVLQFDYAAVA
DRILELAGRGNTPGRNRQKLYRIVKVLKDLSEGVFPQDEYPEEVSTDEDDDMFGSRKRMK
RGARPDRGKDEPAPGPKKSSKPGSDASNKSEEPSKDAGKKKKKKKKKRKKEVLGDKANSE
DPTAAEPVDGPEGSLEAEPADEAEPAEEAVQELQLTSAPAETENLSEEDGSLKKKRRRRK
RRSKNKVLEVETNLEVSAEETSEPPESKDEPTNKTKKKKTRAGCEAPVNGSPASDVAAGG
EDSSEDGPKRRKRSQSAEEGSQQETAGASQQTTDASADTKPPESGNSAPLKKRRKRRKAP
ADEEVGGDAESLQADDEKTEVTMATPTKKKKMNGLQSQTSEETGLRVEMTPADRQEVKKK
KKKKIIPVEFEFEVDEMKEEAESAGGSGEMDAKKHQQVKVQRAADPGSPLKTGTGSGSGS
DFVSFKTRTVVPKPLFCKTRTGQVTPLSKKKKKKPARSELKKVTFGLTNNQTAEFRKSDR
SSLLSPDGSSRVPFDPEQKPKFGVLKTPPTTPKTSKRRSKTKISSTPKSTPKRRPLASDF
F
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgattcagcagccggaggtcctgctggcccaaagactggcctccaacgagaaa
cccgtccggaccaaagctctgcgcaagctcaagaagtacatcagcgcgcgcgagggcgcc
gcaggtggactctcagccgaggagctgctgaagctctggaagggcctcttctactgcgtc
tggatgcaggacaagcctctgctgcaggaggagctttcctcgcagatctccaacctcatc
cacagcttccagaacccccacaagcagcttctgtacctgcagagcttcctggagaccatg
aagcgggagtggaccggcatcgatcgcctgcggatggacaagttcttccagttgatccgc
ttcatgttccgacaaacctttgaggctctgaagagaagctcctgggagagcggggcagtg
accgggttcctggagctgctcggctctcagctcctgcagagcgacagtggagcgccttcc
ggactccagctccacgttctggagctgtacctgaccgagctggccgctgtgggctcagct
gagctcaccgccgatcagaacctgaccttcatcgacccgttctgcagaacagtggccaaa
accaagaatcagatgctcttcggcgccatctgcagccggatcttcagcccgatcatcgac
caggctcccttcgccgtggaggacctgatgagggaggtgtcacaagctgaggactcggag
gaggacgagggggggcaggagacccagagtgggaggagccgaggaaaactcgtcaacggt
aaaggctccagtgatggagtggatgaggaggaggagcttcttcattcagagctggattcc
cagctttcaggtgacgaggacatcggaccagtcttacagttcgattacgccgctgttgca
gaccggatcttggagctggcgggtcgaggaaacacgccgggtcggaaccgacaaaaactc
tacaggatcgttaaagtgctcaaggacctcagtgaaggcgtgtttcctcaggacgagtat
ccggaggaggtctccacggacgaggacgacgacatgttcggcagcaggaagaggatgaag
aggggggcccgcccggaccgcggcaaggacgagccggcgccgggaccgaagaagagttct
aagccaggaagtgacgcatcaaacaaaagcgaagaaccgtcaaaggatgccgggaaaaag
aagaagaagaagaagaagaagagaaagaaggaagttctgggagataaagcgaactctgaa
gacccgacagcagcagaaccagtagatggtccagaaggttccttggaggcggagcctgca
gatgaggcggagcctgcagaggaggcggtccaggagcttcagctgacctcggctccggct
gaaacagagaacctctctgaggaggatggttcactgaagaagaagaggagaaggaggaag
aggaggagcaaaaacaaggttctggaggtggagaccaacctggaggtgtcagcagaggaa
acctcagaacctccagagtccaaagatgagcccacaaacaaaactaagaagaagaaaacc
agagctggatgtgaggctccggttaacggctcgccagcttctgatgtcgccgcaggcggc
gaggattcatcggaggacggtccgaagaggaggaagaggagtcaaagcgctgaggaaggc
agtcagcaggagaccgcaggagcctcacaacagacgactgatgccagcgcggacacgaaa
cctccagaatcaggaaactccgcccctctgaagaagaggaggaagaggaggaaagcacca
gcagatgaagaagtcggaggagatgcagaaagcctgcaagcagacgacgagaaaacagag
gttaccatggcaacgccaacaaagaagaagaagatgaacggactccagagtcagacctcg
gaggaaaccggtttgagagtcgagatgacaccagctgaccgccaggaggtcaagaagaag
aagaagaagaagatcatccccgtggagtttgagtttgaggtggacgagatgaaggaggag
gcggagtcagcaggaggctctggagagatggacgccaagaaacaccagcaggtcaaggtt
cagagagctgcagatccgggctctcctctgaagaccggaaccggttctggatcagggtcc
gacttcgtgtcctttaagaccaggactgtggttccgaaacctctcttctgcaagaccagg
acggggcaggtcaccccgctctccaagaagaagaagaaaaaaccggcccggtccgagctg
aagaaggtgaccttcggcctgacgaacaaccagactgctgagttcaggaagagcgaccgc
agctcgctcctgagtccagacgggtcgtctcgagtgccctttgacccggagcagaaacca
aagtttggcgttttgaagactcctcccaccacgccgaagaccagcaagaggcgttcaaag
acgaagatctccagtactccgaaatccacacccaaacggcgccccctggcctcagacttc
ttctga
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