Oryzias melastigma (Indian medaka): 112155473
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Entry
112155473 CDS
T07439
Symbol
slitrk5b
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112155473 (slitrk5b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRRNT
Endomucin
Motif
Other DBs
NCBI-GeneID:
112155473
NCBI-ProteinID:
XP_024142884
Ensembl:
ENSOMEG00000006404
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Position
LG21:complement(20421119..20427919)
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AA seq
865 aa
AA seq
DB search
MRLWIQYILLSATSVCFVEMSGLYGQLCEELCACEEREGILTVSCENRGIASLSDISPVH
FPQYHLLLTGNLFKKLSADDFVEYKGLTILHLGNNEISDVEAGAFNGLWRLKRLHLNNNK
IDALKEEFFFGLESLEYLQIDYNYITHVEPNAFSRLRHLEVLILNDNLISSLPVNLFQHV
PLTHLDLRGNQLKVLPYVGLLEHMNSVVELQLEENPWNCSCELIALKTWLESILYTALVG
DVVCEFPFRLHGRDLGEVSKQELCPRRAIAEYEMPPLPHLSTDAYHRTTPAAVAASFTSS
GVARSSSRPTKGPRQSAKLKSRPTARAPSNKPQNFGQIVSYQTKSPVPLDCPTACTCNLQ
ISDLGLNVNCQERKIELISDLNPKPYNPKKMYLTGNYITVVQRSDFTEATGLDLLHLGNN
RIARVHDRAFGDLTNLRRLYLNGNLIDRLTSEMFYGLESLQFLYLEYNVIKEVAADTFQH
VPKLQLLFLNNNLLKTLPEGTFNGLILARLNLRSNHLRYLPVSGVLDQLTALVQVDLYEN
PWDCACSILDLKMWVEQLSMGTVVNNVICGSPKRLAGEDMRYIKSTNFCPNNSDILASMI
PPTEEFFPGSTITIETSLDSNNHYSTIPLSVMILALLLIFIMSVFVAAGLFVATKKRRQK
TQNEQNNSVNACISSLNMEYGLYKKGSIPKVRTSAGHVYEYIPAPTESSSRLTAHSPTNS
KSVDGFRDFDELSGPFLGTSDEEAASNVISSEYSAATPEPLNKPSTPRQEDPCCYRDTLE
PDKNRCYSDTLPCRHGAHSSNRYTSDFDARHQYPDRIQQTILYCTTPSTVYVDPNRSEYW
ELKAKLHIDPDYLEVLEKRTTFTQF
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttggattcaatatattttgctaagtgcaacatccgtgtgctttgttgagatg
tccggcctctatggacagttatgtgaggagctgtgtgcgtgcgaggagcgagaggggatc
cttacggtgagctgtgaaaacagaggaattgcaagcctgtcagacatcagcccggtgcac
tttcctcaatatcatctgctcctcactgggaatctttttaagaagctgtctgcggacgat
tttgtcgaatacaaaggacttacaatattacacttgggaaacaatgagatatctgatgtg
gaagccggagcctttaacggactgtggagactcaaacgattacatctgaacaataacaaa
atcgatgccttgaaggaggagtttttctttggccttgaaagtttggagtatttgcaaatc
gattataactacatcactcatgtggagccaaatgccttcagcagacttcgacacttggaa
gtcctgattctgaatgacaacttgatatctagtctgcctgtaaaccttttccagcatgta
ccgttgactcatttggacttgagagggaatcagctcaaagtgcttccctatgtgggtctg
ctggagcacatgaacagtgttgtggagctacagctggaggagaacccgtggaactgttcg
tgtgagctgattgctcttaaaacctggctcgagagcattctgtacaccgccttagtcgga
gatgtcgtttgcgagttcccctttcggctgcacggaagagacctcggcgaggtttcaaaa
caagagttgtgcccgaggagagccatcgctgaatacgagatgccgcctctgccacatctg
agcactgatgcataccacaggaccacaccagctgcagtcgccgcctccttcacctcctct
ggagtggcgagatcctcatcaaggcccaccaagggacctcgtcagtcagccaaattaaaa
tcaagacccacagcacgcgcgccctcaaacaaaccgcagaatttcggtcaaatcgtgtct
tatcagaccaaatctcccgtgcctttagactgtccgaccgcctgcacctgcaatctgcaa
atctcagacctcggcctgaatgtgaactgccaggagcgaaaaatcgaactaatctctgat
ttaaatcccaaaccgtacaatcccaaaaagatgtatctcacaggtaattacatcactgtg
gtgcaaagatcagatttcactgaagcaaccggactggatttgcttcatctaggtaacaac
cggatagctcgtgtgcacgacagagctttcggcgacttgacaaatctacgtagactgtac
ctgaacgggaatttgatagaccgcctgacatctgaaatgttttatggtctagagagctta
cagttcttatatttagaatacaacgtcatcaaagaggttgctgctgacactttccagcac
gtacccaagctccagcttctctttttgaacaacaacctgttgaaaactttacctgagggg
acgtttaacggcttgatattggccagattaaatctgcgcagcaaccacctgcggtatctt
ccggtgagtggtgtgctcgatcagctcacagcccttgtccaagttgatttgtatgaaaat
ccctgggactgcgcttgcagtatattggacttgaagatgtgggtggagcaacttagcatg
ggtacagttgtgaacaatgtcatctgtggctcccctaagaggctagctggggaggatatg
agatacattaagtcaactaatttctgccctaataactctgacatacttgcttccatgatt
ccacccactgaagagttttttccaggcagcaccatcactatagaaacctccctggactcc
aacaaccactacagcaccataccattgtccgtgatgattcttgctcttcttctcatcttc
attatgtccgtttttgtggcggcgggattgtttgtggccaccaaaaagaggcggcaaaag
acccaaaatgaacagaataactctgtgaacgcatgcatcagctccctcaatatggaatac
ggtctttataaaaaaggatcgattcccaaagtccggacatcggccggacacgtgtacgag
tacatcccagcccctacggaatcctccagcagacttaccgcccacagcccgaccaacagc
aagtcggtcgacgggtttagagactttgacgagttgagcggcccctttctgggtacctct
gatgaagaggcggccagtaatgtgataagttcagaatacagcgccgccactccagagcct
ctcaacaaaccttcaacccctcgccaagaggacccgtgctgctacagggacacactggag
cctgacaagaacagatgctacagcgatacgttgccttgcaggcacggagcgcattcgtcc
aacaggtatacctcagattttgatgccagacatcaatatccggacagaatacagcagaca
atattgtattgtacaacaccaagtactgtttatgtggaccctaaccggagtgaatactgg
gaactgaaagccaagcttcacatcgatccagattacctggaggttctggagaaacgaact
acttttacacagttttga
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