Oryzias melastigma (Indian medaka): 112155479
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Entry
112155479 CDS
T07439
Symbol
katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112155479 (katnal1)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
112155479 (katnal1)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112155479 (katnal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_33
Mg_chelatase
AAA_14
AAA_22
AAA_16
AAA_7
AAA_28
NPHP3_N
IstB_IS21
TsaE
nSTAND3
AAA_2
AAA_17
AAA_18
ORC-CDC6-like
RNA_helicase
NACHT
Parvo_NS1
PhoH
Zeta_toxin
AAA_25
AAA_24
Motif
Other DBs
NCBI-GeneID:
112155479
NCBI-ProteinID:
XP_024142892
Ensembl:
ENSOMEG00000013118
LinkDB
All DBs
Position
LG21:complement(4744916..4752647)
Genome browser
AA seq
494 aa
AA seq
DB search
MKLQTNIMNLSEICDNAKKAREYALLGNYDSSVVYYQGVLQQIHKHCQSLRDPALKVKWH
QVKQVLAEECEQVKGIMGTLDKFKSEKPTDVFVPHPEDLPEDPTVWPPPIPAEHRNPVVV
KRPTSAAKQQRKDSPGLQRGAAPGGRGPTNPKAEQPASKEARSSKAKENKGKKADAPGDV
EQKRFDGAGYDSNLVESLERDIVSRNPNIHWEDIADLEDAKKLLREAVVLPMWMPDFFKG
IRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMA
RFYAPATIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQENDDPSKMVMVLA
ATNFPWDIDEALRRRLEKRIYIPLPTAVGRAELLKINLKEVELAPDVELDLIAQKIEGYS
GADITNVCRDAAMMAMRRRIHGLSPEEIRALSKDELQMPVTMEDFNETLKKISKSVSAAD
LEKYEAWMAEFGSV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacaaaccaacatcatgaacttgtccgaaatctgtgacaacgccaaaaaggct
cgggagtacgccctgctggggaactatgactcctctgtggtgtactatcagggcgtcctg
cagcagatccacaagcactgccagtccctcagagaccccgctctcaaagtcaagtggcac
caggtgaagcaggtactagccgaggagtgtgagcaggtgaagggcatcatgggaactctg
gataagttcaagtctgaaaagccgacggacgtctttgttcctcatccagaggacctccca
gaggatcctacagtgtggcctccccccatccctgcagagcacaggaatcctgttgtagtg
aagcggcccaccagtgcagcgaagcagcagcggaaggactctcccggtttgcaacgaggt
gcggcgccgggcgggcgcggtccgaccaaccctaaagccgagcagccggcgagcaaagaa
gctcgcagctcaaaagccaaagagaacaagggcaaaaaggcagacgcgccaggagacgtg
gaacaaaagaggtttgatggagcgggatatgacagcaacttagtggagtcgctggagcgg
gacatagtgtcccgtaaccccaacatacactgggaggacattgctgatcttgaagatgct
aagaagctcctgagggaggcggtggtgttgcccatgtggatgcctgacttctttaaaggg
attcgccgaccttggaagggtgtgttaatggtaggaccaccgggaactgggaagaccatg
ctagccaaggctgtagccacagagtgcgggacgactttcttcaacgtttcctcctccacc
ctcacctccaaatacaggggcgagtctgaaaaacttgtccgactgttgtttgaaatggcc
aggttttatgctccagcaaccatcttcatagatgagatcgactccatctgtggcaggaga
ggaacatcggatgagcacgaagccagtcgccgggtcaaatcagaacttctggttcagatg
gacggagtgggaggagcccaggagaatgatgacccttccaaaatggtgatggtcctagct
gctactaacttcccctgggatattgatgaggcgttacggaggcgactggagaaacgcatc
tacatccccctgccaacagctgtgggccgcgctgagcttttaaagatcaacctgaaagag
gtggagctggctcccgatgtggaactggacctcatcgcccagaagatcgagggctactca
ggagcagacatcaccaacgtctgcagagatgctgccatgatggccatgcggcgccgcatc
cacggcctgagtcccgaggagatacgagccctgtccaaagacgagctgcagatgcccgtc
accatggaggactttaacgaaactctcaagaagatctcaaagtcggtttctgctgcagac
ctggaaaaatacgaagcttggatggccgagtttgggtcagtttag
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