Oryzias melastigma (Indian medaka): 112155488
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Entry
112155488 CDS
T07439
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112155488 (scube1)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112155488 (scube1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
EGF
CUB
hEGF
EGF_MSP1_1
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
112155488
NCBI-ProteinID:
XP_024142911
Ensembl:
ENSOMEG00000016236
UniProt:
A0A3B3DPN3
LinkDB
All DBs
Position
LG23:5627681..5706133
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AA seq
1064 aa
AA seq
DB search
MHAHAPCLPLTHARTHAHAAARPLVQSRRRQRSRAESSHRPAVSSMGSACFSRDACLFLL
LINTCGLMGNVGPADVDECAESSDDCHIDALCQNTAKSYNCICKPGYKGDGKQCEDTDEC
DNDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECLDNNGGCQQVCVNTMGSY
ECQCTEGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICREAPGKGGVTCECRPGFELAKN
QKDCTLTCHYGNGGCQHTCDDTDTGPVCGCHQKYALHSDSKTCIEKDEAAIESSEFNATS
VADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQSDGKTCKDIDECQE
NNGGCDHFCRNTVGSFECSCQKGHKLLTDERTCEDIDECSFERTCDHTCINYPGSFQCLC
KKGYVLYGLTHCGDIDECSINNGSCEYGCINTQGSYECLCPLGMKLHWNKKDCIEAAKCL
PNGKPAPRAQLTCTKSAGAEVCSLSCPSNALFLADSENSYTLSCGVPIQPGRPLQKRNVT
STLPTCADTLAPPIKHKTRFKIKDAKCHLRPRNKEKHREISKQIVSGGQFPCTDDCQVTF
VNLKCDSSKRRRRGRKSPSKEVSLITAEFEMEMNEEEASDVCNVDCVRAKMKVKLQNAMR
TLRKSINKQQFYIQFSGTEYEVAQKPSRISDGAEICSTGQVFRDEKCVSCGVGTFYSGEQ
EQCVQCPPGTYQDTEGQLSCEPCPSTDGQGIVGAKNVSQCGGQCPAGQFSSDGFHPCQPC
PHGTYQPEPGRVLCFRCGGGLMTKNEGSVSFRDCEAKVHCAPGHYYNSTTHRCIRCQAGT
YQSEFGQNYCITCPGNTTTDFDGATNVSHCKNQLCGGELGEFTGYIESPNYPGDYPSNVD
CVWTINPPHKRRILIVVPEIFLPIEDDCGDVLVMRKSALPTSITTYETCQTYERPIAFTS
RSRKLWIQFKSNEVNSGKGFQVPYVTYDEDYQKLIEDIVRDGRLYASENHQEILKDKKLI
KALFDVLAHPQNYFRYTAAESKEMFPRSFIKLLRSKVTRFLQPY
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgcacgcaccttgtctgcccctcacacacgcacgcacgcacgcacacgcagcc
gcgcgccccctcgtgcagtcccgacgccgtcagaggagccgcgcggaatcctcgcatcgc
ccagcagtcagcagcatggggagcgcctgtttttcccgggacgcctgtttgttcctcctg
ctcataaatacttgcgggttgatggggaatgtcgggcccgcagatgtagacgagtgtgca
gagagttcagatgactgccacatcgacgccctctgccagaacacggccaagtcttacaac
tgcatatgcaagccggggtacaagggggatggaaaacagtgtgaagacacggacgagtgt
gacaatgattacaacggaggctgtgtccatgaatgtatcaacataccaggaaactacaga
tgtacttgctatgatggattcatgctggctcacgacgggcacaactgcttagatgtggac
gagtgtctggacaacaatggcggatgtcaacaagtgtgcgtcaacacaatggggagttat
gagtgccagtgcacagagggcttcttcttgagcgacaaccagcatacctgcatccaccgc
tctgatgatggaatgaactgcatgaacaaggaccacggctgtgctcatatctgcagagag
gctccaggcaaaggtggcgtaacatgcgagtgccgacccggctttgaacttgccaagaac
cagaaagactgtacattgacgtgtcactatggaaatggtggctgtcaacacacatgtgat
gacacagacacggggccagtgtgtggctgccaccaaaagtacgcacttcactcagacagc
aagacctgcatcgagaaagatgaggctgcaattgagagctctgagttcaatgccacgtca
gtagctgatgtggacaagcgggtgaaacggcggctacttatggagacctgcgctgtgaac
aacggtggctgcgacaggacatgtaaggacacagccacaggggtgcgctgcagctgcccc
gtgggattcaccctgcagtctgatggcaaaacctgcaaagacatcgatgaatgccaggag
aacaacggaggctgtgaccacttttgcagaaacacagtgggttcttttgagtgcagctgc
cagaaaggccataaacttctcacagatgagcgcacatgtgaagacatagacgagtgttcc
tttgagaggacctgtgatcacacctgtatcaactaccccggcagttttcagtgtttgtgc
aagaaggggtatgttctctacggcctcacccactgtggagatattgacgagtgcagcatc
aataatgggagctgtgagtacggctgcataaacacacagggcagctacgagtgtctgtgt
cctcttggcatgaaactccactggaacaagaaagactgtattgaggctgccaagtgtctt
cccaatggaaagccagcacccagagctcagctgacgtgcacaaagagcgccggggcagag
gtgtgctcgctgtcctgcccctccaacgcactctttctcgcagactcggagaatagctac
acactgagttgcggcgttcccatccaacctggtcgaccacttcagaagaggaacgtcaca
tctactctacccacctgtgctgatacactggcgccccccatcaagcacaagaccaggttc
aagatcaaagacgccaagtgtcacctgcgacctcgcaataaggagaagcacagagagata
tccaagcagattgtatcaggaggccagtttccatgcactgatgactgtcaggtcacgttt
gtcaatctcaagtgcgattcctcaaaaaggcgccgtagagggcgcaagtctccttcgaaa
gaggtttctctcatcactgctgagtttgaaatggaaatgaacgaggaggaagcctcagat
gtgtgcaatgtggattgtgtgagggcaaagatgaaggtgaagctgcagaacgccatgcgc
acactcaggaagtccatcaacaaacagcagttctacatccagttttctgggacggaatat
gaagtagctcaaaaaccatccaggatatccgacggagcggagatctgcagcacaggacaa
gtgtttcgggatgaaaaatgtgtgagctgcggtgtggggacattttacagcggggagcag
gagcagtgtgtccagtgtcctccaggaacataccaggatactgagggtcagctgtcctgt
gagccgtgtcctagtacagatggacagggcattgttggggccaagaatgtgtctcagtgt
ggaggtcagtgtccagcaggtcagttttcttctgatgggtttcacccctgccaaccctgt
ccacatggtacttaccagccagaaccaggccgagttctgtgtttccgatgtggaggaggt
cttatgactaagaatgaaggatctgtctcattccgagactgtgaggccaaagtgcactgt
gctcctggacattactacaactctaccacccaccgctgcatccgctgccaagccgggact
taccagtccgagtttgggcaaaactactgcatcacctgtccggggaataccacaacagac
tttgatggtgccacaaatgtttcccactgcaaaaatcagctgtgtggaggggagttgggt
gagttcacgggctacatcgagtctcctaactaccctggagattacccatccaatgtggac
tgtgtctggaccatcaaccctccacataagaggcggatcctcatcgtggtgccagagatc
tttctacctattgaagatgactgtggagacgtattagtcatgagaaaaagtgcgctgccc
acgtccataaccacgtatgagacatgtcagacctatgagagacccattgccttcacgtct
cgctcacgcaaactgtggatccagttcaagtctaacgaggtcaacagtggcaaaggcttc
caagttccatatgtcacgtatgatgaggactatcagaagctcatagaggatatagtgcga
gacggacggctgtacgcctctgagaaccatcaggagatactaaaggacaagaaactgata
aaggccctgtttgacgttcttgcccacccccagaactacttcagatacacagcagccgag
tccaaagagatgttccctcgctccttcatcaagctgctacgctccaaagtaactaggttc
ctacaaccctattaa
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integrated database retrieval system
