Oryzias melastigma (Indian medaka): 112155520
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Entry
112155520 CDS
T07439
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112155520 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112155520 (mid1)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112155520 (mid1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112155520 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
TPP_enzyme_M_2
Motif
Other DBs
NCBI-GeneID:
112155520
NCBI-ProteinID:
XP_036065578
Ensembl:
ENSOMEG00000006656
LinkDB
All DBs
Position
LG21:complement(20634588..20659109)
Genome browser
AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVISLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPSETRRERAGPEQKAMSSPADQVQ
CQFCEQDPPQNAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLQDSHLRGIMCLEH
GDEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALTDRYEKLKKPPHRSLCMGPDHSQQEA
DQKTLDSNLSNLIKRTSELENLMGKLIQTCQQVEVNASKQERKLQEECDLLVNIIQQRRQ
IIATKIKEGKAMRLRKLAQQIGSCKQCIERSSSLISQADQTLKESDHASFLQTAKSICER
VSMATASSQILLPEINLKDAFDTFTLDFTREKKTLESLDYLTAPDPPVIREELCTASYDT
ITVHWTSDDEFSVVSYELQYTIFTNQSNVVSLCNSIDSWMIVPNIKQNHYTVHGLQCGTK
YVFIVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHN
QERFSSHNSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSASWVLA
RCNNSWVVRHNSREIPVEPSPHLRRLGVLLDYDSGSLSFYDAVASQHLHTFEISFAQPVC
PVFNVWNRCLTILSGLPVPDHLEGTDYSH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtccaatctgtctggagctttttgaggacccg
ctgctcttaccctgcgctcacagcctttgtttcaactgtgcacaccgaatcctggtctcc
cactgcacccccagtgagccgattcagtccatcagcgcctttcagtgcccgacgtgtcgc
tatgtcatctccctcaaccagaggggcctagagggactcaaacgcaacgtgaccctgcag
aacatcatcgaccgctaccagaaagcctccttgagtggacccaactctcccagcgagact
cgccgtgagcgagccggccctgaacaaaaagccatgtcgtcccccgctgaccaggttcag
tgtcagttctgcgagcaggaccctccgcagaacgcggtgaagacgtgcgtgacctgtgag
gtgtcgtactgcgaggagtgtctcaaggccacccacccaaacaagaagcctttcacaggc
caccggctgatcgagccgttgcaggattcccacctccgagggatcatgtgtctggagcac
ggagacgagaaggtcaacatgtactgtgtgacggatgagcagctgatctgttcattgtgc
aaacttgtcggccggcatcgagatcaccaagtggcagccctcactgatcgctatgagaaa
ctcaagaaacccccccaccgctctctctgcatggggcctgatcactcacagcaggaggca
gaccagaaaaccttggattccaaccttagtaatctaatcaagaggaccagtgagctggaa
aacttgatgggcaaacttatccaaacctgccaacaagtggaggtgaatgcatcaaagcaa
gagaggaagcttcaggaggagtgtgacctgctggttaacatcattcaacagcgacggcaa
atcatcgcaaccaagataaaagagggaaaggctatgaggctgagaaagctagcgcaacaa
ataggcagctgcaagcagtgcatcgagaggtcatcctccctcatctctcaggctgaccaa
accctcaaagagagcgaccacgcttccttccttcagacggctaaaagcatctgtgagaga
gtgtctatggcaacagcctcctctcaaatcctgttgccagaaattaacctgaaggatgct
tttgataccttcactttggacttcacaagggagaagaaaacactagaaagcttggattac
ctgacagccccagacccaccggtaatccgcgaggagctgtgtacagcctcatatgacaca
atcacggttcactggacatcggatgatgagttctcagttgtgtcatatgaacttcagtac
accatcttcactaaccagtctaatgttgtcagtttgtgcaactccattgatagctggatg
attgttccaaacatcaagcaaaatcattacactgttcatggactccaatgtgggaccaag
tacgttttcattgtgaaggccataaaccaggctggaagccggagcagcgaaccaggaaaa
ctcaaaaccaacagtcagccgttcaagttggacccaaagtcagctcatcggaagcttagg
gtgtctcacgacaacctaacagttgagagggatgagacttcgtccaagaagagccacaat
caagaacgattttccagccataacagctacggagtcacgggaaatgtctacattgacagt
ggtcgtcattactgggaggctctgattggaggaagcacctggtttgctgtggggattgcc
tacaagtcggcaccaaagcacgagtggattggcaaaaactccgcctcgtgggttctggct
cgctgcaacaactcgtgggtcgtccgtcacaacagcagggagattcccgtcgagccttca
ccgcacctgcggcgactcggagtgctgttggactacgactccggatctctgtccttctac
gacgccgttgcctctcagcacttgcatacatttgaaatcagcttcgcccagccggtgtgc
cccgtcttcaacgtgtggaacagatgtctgaccatcctcagtggactgcctgtgccggat
cacttagaagggacagactacagccactga
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