Oryzias melastigma (Indian medaka): 112155622
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Entry
112155622 CDS
T07439
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155622 (arhgef40)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112155622 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
IQ_SEC7_PH
KIAA1755_C
PH
DHC_N2
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
112155622
NCBI-ProteinID:
XP_024143115
LinkDB
All DBs
Position
LG18:<19941370..19973665
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AA seq
1713 aa
AA seq
DB search
MGSEAMEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQQDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLA
LKCLAAGGRTVQEILVPESQHPLVFTSEWLHSINKERGHRREVGGGLDTCLVSTCDGVVR
LPWKEIVYPKFIHDPSEEVDLLANKDSLMSKRLPSEGGSSLGGWGDSSSGELDSWSWDEE
EDDPSTPRGLVGDPALRRRSSEDGLGRTGRPPQLDGDYVELLELRGGPDGRVDNRQRYLE
MHGISKTKTLPLCRRGKAIKLRKGKAWGYWKMERSGSFRAIVGARGDVSTTKEDLPPPQS
LRGLAETGKGRRPSSHDSDEGNKAAPEISGICFGGPRRPGVGRERDSSGFTNASSDSRKD
SQSSENLVTRGDRDLNHKPASEGQSDQGSQSDSVFEDSDKRLSWDSDPITPTSDAPERPL
AEVCAGQHHTCSGSTTNNSSKPKLAGCKDEGKTEDRACPKGKDVKSAGFRAPRRRRKGKG
AKGRARSGGRPNQKGSKVQGKAPQPSTPSCSAPAKHSSTEKNQPEQMESADGEEGGSTTT
DEEKQRRSRTETTESQNHVQSGTPYPNPLCGEPCSTEPHPDLQNRISSEEPVLLRQLDAE
LLQSGALQLTGTVDRLGRALVFTETGSLKDGFCAEEAAQILACFHRITRPAAREKGLTVL
LDSRRSPPSDLCLSALKRFQVLVPGGLGSVLVLVEEQQEPLSYTLHETEVHAVKGTAVLQ
QYVDKQQLLKELDGDFSHSHSDWLAFRLRLESLTERCESALCLLGESQQELETEPMPEDI
KAVPQSIDKHRRLMANVLADQRLTELQQRGGAWLAGLTNCSSGLGQKSPDCRAALAAASQ
LYDSVDHALHQLVQVSNQRGGNLEALGQLARLVDKLEKCDKEIEEVQLQLEDYRDPPLSL
SRLSLKQQKFRTFRESVNELHSETLAVLSDLEGWNHLNWAGLSQVQIRLPPVREKLRDMS
HCLSDCWTTLDHTQRLLSTLTEATQWCDAVSSASTSCPLSSLPPIPPSRFQDARSLAMEL
GGGPLMDLWTQTVERYQRTVAQVKPRFLQSERTQGQGKPKTPSLPSQWDLLGPDSESEWG
LGAGGGDGGLQSWGSLASLFRPQTCSTLKIGDEKGSKKDTAGGGNGGGAGGGKFLQNLLN
PAKKSPPEAPLPPKPPRKRHPSFDLQALLAPRKGAATPKSVESPAGGASRSSPMSWLGRR
ALADPVITTSMAAAVPDWGSGRGGGGVLIRGVEVSSKEVVDHTGSPRQHVLLGRADRDAG
ADKGSSAQSKPYLLWCRMLSSERQYVAVLKGVEETYLPLLELSDTPTSLRGKGESLFSNW
SSLSTFHSQSLLPAMEGALVQSLLQQDCFSKFRDHFLQYSHYIRSKPESDSPLVSQAADF
FKSKLPQASSLPPLSFPQCLQAPIQRLDQYCEALNELGGLNPASDSALSVLRHAQRHGED
LRASDLIVGCPIPVAERGELVRQGELTACGGVRRKRAGVRNVFLYQNFLIFTKQKSPTAG
RSAYSYKHSIKTGEMGLTQSVGDDGLKFEVWVRQAPRSKASITLQARDREDRAGWAHDIA
HLLWTHAINNTELCLKESLCMGISSKLLLDATGSAASELDSACSLSDRVHSSCSDSSSVG
SQKEGGSPASGRDPQTCSGSTSHSQNLCPSTAV
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggaggccatggaggactgtgtgcagggggcgctctcctcactctaccccccg
tttgagagcacagcgccacccctcctctctcaggtcttctcagtcctggagtcaacctat
caacaggacagtctccgctacctcctcgactacttcgttccagccaagcacctcctgcac
aaactccagcagcacgcctgttctcagtacctggggtgcctgttcctccactccggctgg
cctctctgcctgggcgagaaggtggtggtccagctctccaccttggactggaggctgctc
cgcagcaacgacttctacctacaagtggtgccgttctcaacccgctgccccagacttgcc
ctgaagtgtctggccgccggggggcgcaccgttcaggaaatcctggtgcccgagtcgcag
catcccttggtgttcacctctgagtggcttcacagcatcaacaaagagcggggtcacagg
cgagaagttggaggaggacttgacacctgccttgtcagcacctgcgacggagtggtacga
cttccttggaaagagatcgtctacccaaagtttatccacgatccttctgaagaggtggac
ctcttggccaacaaagacagtctgatgagcaagcgactccctagtgagggaggcagcagt
cttgggggttggggggactcgtcttcaggggaactggactcctggtcttgggatgaagag
gaagatgatccctcgacgccccgtggcttggttggcgaccccgcgctcaggcgaaggagc
agtgaggacggtctcggacggaccgggaggccgcctcagctagatggtgactatgtggag
cttttggagctcagagggggcccagatggaagggttgacaacaggcagaggtacctagag
atgcacggaatctccaagaccaaaacgttgcctctgtgcaggagaggtaaagctatcaag
cttcgcaaaggaaaagcgtggggatactggaagatggaaagatcaggaagctttcgagca
attgttggtgccagaggagatgtgtctacaaccaaagaagatctcccacccccacagtct
ctaagaggtttggcagaaactggaaagggaagaaggccatcctcacacgactcagatgaa
ggaaataaagcagcaccagaaatcagtggtatctgttttggaggtccacggcgacctggt
gtgggccgagaaagggatagcagcggattcacaaatgccagcagcgacagcaggaaagat
tcccagagtagtgagaacttggtcaccaggggagaccgtgacttgaaccacaaacctgcc
tcagagggtcagtcggatcaaggatcccaatccgactctgtttttgaggactccgacaaa
cggctgagctgggacagcgatcctatcacacccacgtcagacgcaccagagagaccactc
gcggaggtctgtgcgggccaacatcacacctgcagtgggtctaccaccaacaattcgtcc
aaaccaaagcttgcaggctgtaaagatgaagggaagacggaggacagagcgtgtcccaag
gggaaagacgtaaaatctgccggattcagagctccacggaggagaaggaagggaaaaggg
gccaaagggagagccaggtctggtggccgtccaaaccagaagggctccaaagttcagggg
aaagctcctcagcccagcactcccagctgctctgcacctgctaagcattcaagtacagag
aaaaaccagcctgagcaaatggaatcggctgatggggaggaaggaggctccacgacaaca
gacgaagagaaacaaaggagaagcagaacagagacaactgaatctcagaatcatgtccag
tctggtacgccttaccccaaccccctctgtggggagccctgctccacagaaccccacccg
gacctacagaacagaatcagctccgaagagccggtgctgctccggcagctggacgcagag
ctgctgcagtcgggggcgctacagctgacaggtacggtggacaggctggggcgggcgctg
gtcttcactgagaccgggtctttgaaggatgggttctgtgcggaggaggcggcccagatt
ctggcctgcttccacagaatcacccgacctgcagccagagaaaaaggtctgacggtgctc
ctggacagcagacgctctccgccctccgacctctgcctttctgcactgaaacgcttccag
gtgctggttcccggtggtctcgggtcggttctggttttggtggaagagcaacaggagcct
ctttcctacacgctacatgaaacggaggtccacgcggtgaaggggacggcggtgctgcag
cagtacgtggacaagcagcagctgctcaaagaactggatggagacttcagccactcacac
tcagactggctggccttcagactgagactggaaagcctgacagagcgctgtgagagcgcc
ctctgtctgctcggagaatcacagcaggaactggagactgagccaatgccagaggacatc
aaggctgttccgcagagcattgacaaacacaggaggctcatggccaacgtgcttgccgac
caacgccttactgagctccagcagaggggcggggcctggctggcagggttaacaaactgt
tcatctggattaggacaaaagtcgcctgactgcagggccgctctggccgccgcctcccag
ctgtacgacagcgtggaccacgctctgcatcagctggttcaggtgtccaaccagagagga
ggcaatctggaagcactgggacaactggcaagactggtggacaaactggaaaagtgcgat
aaggagattgaagaagtgcagttgcagctggaggactacagagatccccctctgtccctc
agcagactgtcgctcaaacagcagaagttcaggaccttcagagaatccgtcaatgagctg
cacagtgagactctggccgttctcagtgacttggagggctggaaccatctgaactgggcc
gggctcagccaagtgcagatccgacttcctcctgtcagggagaagctgagagacatgtcg
cactgtttgtccgactgctggaccactctggaccacacgcagaggctgctgtccaccctg
accgaggccacccagtggtgtgatgcagtctcctccgcctccacctcctgccctctctcc
tccctccctcccatccccccctcacgttttcaggatgctcgctctttggccatggagctg
gggggcgggcccctcatggacctctggactcagacggtggagcgttaccagcggactgtt
gctcaggtcaaaccccggttccttcagtctgagaggacgcagggccaggggaagcccaaa
accccctccctccccagccaatgggacctgttgggccccgactccgagagcgaatggggg
ctgggggccggaggaggcgacgggggattgcagtcgtggggctccctggcgtctctgttc
agaccgcagacctgctccactctgaagataggagacgagaaagggagcaagaaagacact
gccggaggagggaacggaggcggggccgggggcgggaagttcctacagaaccttctcaat
cctgcaaaaaagagtcctccagaggcccccctccctccaaagccacccagaaagcgccac
ccgagctttgacctccaggctcttctggctcctcgtaaaggcgcagctacccccaaatct
gtggagtccccagcaggtggggcgtctcgcagctcccccatgtcttggctggggagacga
gccctggctgacccggtcataaccaccagcatggcggcagctgtccctgactggggcagt
gggagaggaggaggaggagttcttatccgaggggtggaggtcagcagcaaggaggtggtg
gaccacacagggtcacccaggcagcacgtcctgctggggagggcagacagagacgcaggg
gcagataaagggagttctgctcagagtaagccgtacctgctgtggtgtaggatgctgagc
tctgagaggcagtatgtggctgtcctgaagggggtggaggagacttacctgcctctgctg
gagctctcagacacccccacctctctgagggggaaaggggagtcgctgttctccaactgg
agcagtctcagtacctttcactcgcagagtctgctccccgccatggagggcgctctggtg
cagagtctcctgcagcaggactgcttcagcaaatttcgagaccactttctccagtattcc
cactacatcaggtccaaaccagagtcggactcccctctggtctcgcaggccgctgacttt
ttcaagtccaaactcccccaggcctcctccctccctcccctctcctttccccaatgtctt
caggcccccatccagcggctggatcagtactgtgaggcattgaatgaactggggggcctt
aacccggcttcagactccgccctctccgtcctcagacatgcccagcggcacggcgaggac
ctcagggctagtgacctcatcgttgggtgtccgatcccagtggcagaacggggcgagctg
gtccggcagggcgagcttacagcctgtgggggggtccggaggaagcgtgcgggcgtcagg
aacgttttcctgtaccagaactttctgatcttcaccaaacagaagagtccaactgcagga
cgctccgcctacagctacaagcacagcatcaagacgggtgagatgggtctgactcagagc
gtgggagacgatggactgaagtttgaagtttgggtccgacaggcgccgcggtccaaagcc
agcatcacgcttcaggcgcgggacagggaagacagggcgggctgggctcacgacatcgcc
cacctgctgtggacgcacgccatcaacaacacagagctgtgcctgaaggagtctctgtgc
atgggaatctccagtaaacttctgctggacgctacaggaagcgcagcgtcagagctggac
tccgcctgcagcctcagcgacagagttcacagtagctgctcagactcgtcctccgttggc
agccagaaggaggggggatccccggcgtccgggagggacccccagacgtgctccggatca
acaagccactcacagaacctgtgtccctccacagctgtgtga
DBGET
integrated database retrieval system
