Oryzias melastigma (Indian medaka): 112155712
Help
Entry
112155712 CDS
T07439
Symbol
senp3b
Name
(RefSeq) sentrin-specific protease 3b isoform X2
KO
K08593
sentrin-specific protease 3 [EC:
3.4.22.68
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112155712 (senp3b)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112155712 (senp3b)
04121 Ubiquitin system [BR:
oml04121
]
112155712 (senp3b)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
112155712 (senp3b)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
112155712 (senp3b)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
112155712 (senp3b)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
112155712 (senp3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
SENP3_5_N
Motif
Other DBs
NCBI-GeneID:
112155712
NCBI-ProteinID:
XP_024143309
Ensembl:
ENSOMEG00000003315
LinkDB
All DBs
Position
LG18:21015120..21033209
Genome browser
AA seq
541 aa
AA seq
DB search
MRDSGGSLAQNRWQGDLGLTAVGQDGTGGGGIPGDHLIVPVSGHSVSSPMQLRLGQKEKL
WTGEYIEEEEEEEEDGMETMGDEEEITDVYSEDMGEFEAKAWKDNGKEEIKDVEVEESQK
TLEWEVPDFPSQSSQHLHVPQHHGAEEMPDHSSEVGEDDLFSAGAARKPRPRRHRVRRGR
HVRSYQALGLLLALRWRTRCKRRRLTGSQRLRCSNFSSRRRKMRRYEQAPYSEEEDSSEE
VFTASCRDKQMNGPSSHKLHEGGRQAVEAKPVEVALSEEHTSCVTGILQECLQQYGSLIP
VHIDDVVEKLQDLFKENFSQPHRKAMVQHLMQSFQRTSGSAVAKTFRVNYKRHVLTMDDL
GTLYGQNWLNDQVMNMYGDLVMDSVPDKVHFFNSFFYDKLRTKGYEGVKRWTKNVDIFQK
DLLLIPIHLEVHWSLVSVDIQRRAITYFDSQRTLNRRCPKHIFKYLQAEAVKKNQQDFLS
GWKGFFKMNVGRQNNDSDCGAFVLQYCKCLALGQPFSFGQQDMQRLRRQMYKELCHCKLI
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacagtggcggtagcttggcccagaaccgctggcagggagatctgggcctgact
gctgtggggcaggacggcaccggaggaggtgggattcctggagaccacctgatcgtcccg
gtgtccggccacagcgtttccagccccatgcagctcaggctgggccagaaggagaagctg
tggacgggcgagtacatagaggaggaggaagaggaggaagaggatggaatggaaacgatg
ggcgacgaggaagagataacagatgtgtactcggaggacatgggggagtttgaggccaag
gcctggaaggacaacgggaaggaggaaatcaaagacgtggaagtggaggagagccagaag
acgttggagtgggaggtcccagactttccatcccagtcctcccagcaccttcatgtaccg
cagcatcacggagcagaagagatgccggatcactccagtgaggtcggagaagacgacctt
ttctccgcaggtgcagccaggaagccccgccccagaaggcaccgggttcggaggggcagg
cacgttcggtcctatcaggctctcggacttctgcttgccctgcgctggcggacccgctgc
aagaggcgccggctgaccggctcacagaggctgcggtgctccaacttctccagcaggcgg
aggaagatgagaagatacgagcaggctccctacagcgaggaggaggacagcagtgaggag
gtgttcacagcctcctgcagagacaagcagatgaacggcccttcctcacacaagctgcac
gaaggaggacggcaggcggtggaggccaaacccgtggaggtggcgctgagcgaggagcac
accagctgtgtaaccgggatcctgcaggagtgtctgcagcagtacgggagtctgatcccc
gtgcacatagacgacgtggtggaaaagctgcaggaccttttcaaggagaacttctcacag
cctcacaggaaagccatggtccagcacctcatgcagtccttccagcgcacgtcaggatca
gccgtggccaaaaccttcagagtcaactacaagaggcacgttctgaccatggacgacctg
ggcacgctgtacggacagaactggctcaatgaccaggtgatgaacatgtacggtgacctg
gtcatggattctgttccagataaggtccacttcttcaacagcttcttctacgataagctc
aggacaaaaggatatgaaggagtcaaacggtggacgaagaacgtggacatctttcagaag
gatctgctgctgattcccatccacctggaggtgcactggtctctagtcagcgtggacatc
cagcgtcgagccatcacctattttgactcgcagcgcaccctcaacaggcgctgtcccaag
cacatttttaaatacctgcaagctgaagctgtcaagaagaaccagcaggacttcttgagt
ggctggaagggcttttttaaaatgaacgtggggcgccagaacaacgacagtgactgtgga
gcgtttgtattgcagtactgcaagtgtctggctctggggcagcccttcagctttggccag
caggacatgcagcggctccgaaggcaaatgtacaaagaactgtgtcactgcaagctcatc
ctgtga
DBGET
integrated database retrieval system
