Oryzias melastigma (Indian medaka): 112155714
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Entry
112155714 CDS
T07439
Symbol
rtn3
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112155714 (rtn3)
03036 Chromosome and associated proteins [BR:
oml03036
]
112155714 (rtn3)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112155714 (rtn3)
Autophagy
ER-phagy
ER-phagy recepters
112155714 (rtn3)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112155714 (rtn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
112155714
NCBI-ProteinID:
XP_024143317
Ensembl:
ENSOMEG00000005368
LinkDB
All DBs
Position
LG18:25196734..25224207
Genome browser
AA seq
1113 aa
AA seq
DB search
MESMTQSAQISSSQGFADGQNSAAKESKLSDSFLSTSPVSLIQSPQDKKVIVGTDKSSES
VTTSLRFPSQPGSFSASNYGSEAGAAEGQPGSPIKTSPVSERIKALEALAAKKREPEYRD
GSFHHFRDRHHEKSSSDVPKLPPSVIKPPIDIPKPSVNIPKPSADKSQPPTDIPKLSFDT
PKPTMDISKPPTDIPKLPADGPVCSTEKIVPGGLKMEGSPVEESPESPFEVLGDLRQGSE
YEETAEWMKAHLPPVLDIDAAESNKSTSSVPQKDPDIGFPEDPAAFASVPDAFMDSPVES
PKLRNELIESQKRSESEEEFDISFLPVAYVWDQQEKAGSSNLESKTPSSDAAPAGLGSPS
PSVPPSDCHSEAEQNVDHEKEASWGEDLDRPVVSEADSSGESEDTVIEEGGSALPQSVNP
PDLNDPPTAPDLSTSEKVVPPPKSERKLMQVPTINVIETDEPNYSDEEIENEPQLTEEED
FKIVNDSSNQRASEPEPQSQDVGPPKTRPLETEFMEGYSPPSSPVDSDVEYSPKHKILES
ISEVDYQQPLFTSEVQTDTEQAEKSQMMPNRVQNTVMHDDVDFPDNNDEWSDEGQDNDLK
LREESLSSQGSAFLNQLKVDEQSSAAGPEPRKESAVSVTGFMQDDIYDRQSFDYENDEPS
PLDCSDGKEFNKAKKQVILDPAQDIEEEIPDLESDASFNDDEVLNNPADQTSLDEYPQNP
YSCFHHQTLSNEKNMGSIDKLPSLQQGSEVQLDSGSYVDVKDNESVSNKLDGESSFSEPP
NSFVEFMRECLKSRQDEEPEEGLRSISSENQLSKTILPTSQSPPRIMMDLDQERITVSAL
KELGSSQDEMQLNLQTEVPDQRDGDGSATSAHLSSFTTAPPSACSQSDFDNSLSKEVETV
DEWMAEAYYLAEHVLTAILTHLSVKDLIHWRDPKKSGVVFGLSMLMLLSLAAFSVISVVS
YLLLALLIVTISFRIYKSVVQAVQKSNEGHPFKMLIDKDVSIPPETFRKHVDASLTYINR
GLKQMSRLFLVEDLVDSLKLAVVMWLLTYVGAVFNGITLLILADILLFAVPPIYEKNKTQ
IDQYIDVARTQVNATVAKLQEKLPGAVKRSKAE
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaatgacccagtccgcccagatatcctcgtcgcaaggttttgccgatggacaa
aattctgctgccaaggaatcaaagctgtccgattcctttctttccacttcgcctgtatct
ctcattcagtctcctcaagacaagaaagtgattgtgggcactgacaagtcctctgaaagt
gtaaccacatctctacgctttccgtctcaacctggttccttctctgctagtaattatggg
agtgaagcaggagcagcagaagggcaaccgggttctccaataaagacgtctcctgtttca
gagcggataaaagctcttgaagctcttgctgccaaaaagagagagcctgaatatagagat
ggaagtttccatcactttagggaccgccatcacgaaaagtcttcctccgatgtcccaaaa
cttccccccagtgtcataaagcctcccattgacattccaaaaccatctgttaatattccc
aaaccttctgctgataagtcccaacctcccactgacattccaaagctttcttttgatacc
cccaaacctaccatggatatttcaaaacctcccactgacattccaaaacttcctgcagat
ggtccagtttgttccactgaaaagattgtaccaggaggtttgaaaatggaaggttctcct
gtagaggagtcaccagagtctccatttgaagtgcttggagatttgagacaaggcagtgaa
tatgaagaaactgcagagtggatgaaggctcatttacctccagtgctggacattgacgct
gccgaatcaaataaaagcaccagcagtgtcccacagaaagatcctgacatcggttttcct
gaggatcccgctgcatttgctagtgtccctgatgcattcatggactcgcctgtcgagtct
ccaaaactgaggaatgaattgattgaatcacagaaacgatctgagtcggaggaagagttt
gacattagctttttacctgtagcctatgtgtgggatcagcaagaaaaagcaggttcatca
aatctcgagtctaagactccatcttcagatgcagctcctgcaggcttgggttccccatct
ccctctgtgcctccttctgattgtcattctgaggctgaacagaatgttgatcatgaaaag
gaagcctcttggggggaagatttggatcgtccagttgtaagtgaagcagatagctcagga
gaatcagaggatacagtcattgaagaaggtggctctgctctcccacagtctgtgaatcca
ccagatttaaatgatccccccacagcccctgatctttccaccagtgaaaaggtagtccct
ccaccaaagtctgaaaggaaacttatgcaagttccaacaataaacgttattgagactgat
gagccaaattacagtgatgaagagatcgaaaatgaacctcaattgacagaagaggaggac
ttcaagattgtgaatgactccagcaatcaaagagcatcagaaccagaaccacaaagccaa
gatgtgggaccacccaaaacacgacccttggaaactgaatttatggaaggctattcgcct
ccatcctcacctgttgactctgatgttgaatattcccccaagcataaaatccttgaatct
atttctgaggtggactatcagcagcctttgtttacatctgaagttcaaactgatactgaa
caagcggagaagtcacagatgatgccaaacagagtgcaaaacacagtcatgcatgatgac
gttgatttccccgacaataatgatgaatggtcagatgaaggtcaggacaatgacctaaag
cttagagaggaaagtctctcatcgcagggatcggcttttctcaaccaattaaaagtggat
gaacaaagcagtgcagcaggaccagagcctcgcaaggaaagtgctgtttctgtgaccggc
ttcatgcaggatgatatttatgacagacagtcgtttgactatgaaaatgatgagccatca
cccttggattgcagtgatggtaaagagtttaataaagctaaaaagcaggttattttggat
cctgcacaagatatcgaagaagaaataccagacctggagagtgacgcttcatttaacgac
gatgaagtcctcaataatcctgctgatcagacatctctggatgagtatcctcaaaacccc
tattcctgctttcaccatcagacactaagcaatgaaaagaacatgggaagtattgacaaa
ctcccatctctgcaacaaggttcagaagttcagctcgattcgggctcgtatgttgatgtt
aaagacaacgagagcgtttccaacaaacttgacggcgaatcttcattttctgaaccacca
aacagttttgtggagttcatgagagaatgcctgaaatcgagacaagacgaggaacctgag
gaagggctgcgttctatttcttcagaaaatcagctcagcaaaacgattttgcctacttcc
caatcacctcccagaattatgatggatctcgatcaagaacgcatcactgtcagtgctctc
aaagagctgggcagcagtcaggatgagatgcagctgaacctgcagacagaggttccagat
cagcgggacggtgatggcagtgctacatctgcacacttgtcttccttcaccacagctcct
ccctctgcctgctcacagagtgacttcgacaactccctctccaaagaggtggagacggtt
gatgaatggatggctgaagcctactatctagcagagcatgtcttgacagcaatactaacc
cacttatcagtaaaagacctgatccactggcgagaccccaagaagtcgggggtggtgttc
ggactgtccatgctgatgctgctgtcgttggcagctttcagcgtcatcagtgtggtgtct
tacctgctgctcgccctgctcatcgtcaccatctccttccgcatctacaagtctgttgtt
caggccgtgcagaagtcaaatgagggacaccccttcaagatgctgatagataaggatgtc
agcatccctcccgagacgttccgtaagcacgtggacgccagcctgacctacatcaaccga
ggcctgaagcagatgagccgcctcttcctggtcgaggatctcgttgactccttaaagctg
gctgtggtcatgtggctgctgacctatgtgggagcagttttcaatggaatcaccctcctc
atcctggctgatatcttgctgttcgctgtgcctcccatctacgagaagaacaagacccag
attgatcagtacatcgatgttgctcgtactcaagtcaatgctacagttgcaaagttgcaa
gagaaactccccggagctgtgaaacgaagcaaagcagaataa
DBGET
integrated database retrieval system
