Oryzias melastigma (Indian medaka): 112155776
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Entry
112155776 CDS
T07439
Symbol
nelfa
Name
(RefSeq) negative elongation factor A isoform X1
KO
K15179
negative elongation factor A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112155776 (nelfa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112155776 (nelfa)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
112155776 (nelfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NELF-A_N
CathepsinC_exc
Motif
Other DBs
NCBI-GeneID:
112155776
NCBI-ProteinID:
XP_024143466
Ensembl:
ENSOMEG00000015844
LinkDB
All DBs
Position
LG18:17267283..17276305
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AA seq
545 aa
AA seq
DB search
MASMKDSDTGLWLHNKLGSTDELWTPPSIASLLTVSVIDNIRLCFSSLSPPVKLKLLLGM
LHLPRRTVDEMKEALSEIIQLATVDSEPWVLMVADILKSFPETGSLNLDLEEQNPNVQDI
LGELREKVSECEASAMLPLECQYLNKSALTTLVGPLTPPVKHFQLKRKPKSATLRAELLQ
KSTETAQQLKKTAGVPFHAKGRGLVKKIDTTTPLKGIPKAPFRSPTAPSMFSPPSNRTPI
APARTPLRKERGVKLLDISELDMVGAGREAKRRRKTLETEAAEKPAKEEAVVENTTPDYA
AGLVSAQKLGSLNENPLPSTSYLPATPSMVPSSSYIPSSEAQPANAGGSNRDPLQAARQP
EESAAVAVGAAATLQTQYKQRTPMYNAGTTVNPATPTSPSTPASTPASNGPPAIASQPET
PTQPPSTPQTPTPTPAPTPAQPQPKKNLSLTRDQMYAAQEMFKTANKVTRPEKALILGFM
AGSRENPCPEQGDIIQIKLSEHTEVLPKADGTGSTTMLVDTVFEMNYSTGQWTRLKKYKP
ITNTS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgatgaaggacagcgacactggcctgtggcttcacaacaaactaggatcaaca
gacgagctgtggacacccccgagtatcgcttccctgctcacagtgtcagtaattgacaat
atacggttatgcttttccagcctgtcgccgccggtgaagctgaaactgcttctagggatg
ctgcatcttccacggcggaccgttgacgagatgaaggaggccttgtccgagataatccag
ctggctacggtggattcagagccatgggtgctgatggttgcagatattctaaagtccttc
ccagagacgggatctctcaatctggatttagaggagcagaatccaaatgtgcaggatatt
ttaggagagctcagggagaaagtgagcgagtgcgaggcgtcggccatgcttcctctagaa
tgccagtacttgaacaagagtgccttgaccactctggtgggacccctgacgcctcccgtc
aagcatttccagctcaagaggaagcccaagagtgcgactctcagagcagagctgctgcag
aagtcgacggagacggcccagcagctgaagaagacagccggagtgccttttcacgccaaa
gggaggggactggtcaaaaagatcgacacgacgacgcccctcaaagggatccctaaagcc
ccgttccgcagcccaactgccccgagtatgttcagccctcccagtaaccgcacccccatc
gctcctgcacggacaccccttcgcaaagagaggggcgttaagcttttagatatttctgag
ctggatatggttggagctggacgagaagcaaagaggagaaggaagactctggaaacggaa
gctgcagagaaaccagccaaagaagaggccgtggtggagaacactacgccagactacgct
gcaggtctcgtctctgcacagaaattgggatccctgaacgagaaccctctaccatcaacc
agctacctgcctgccacacccagcatggttccctcctcctcctacattcccagctcagag
gcacagccagcgaatgctggcgggtccaatcgagacccgctgcaggctgctcgccagccc
gaagagtcggcggcggtggctgtcggtgcggccgccactttgcagacccagtacaagcag
aggacacccatgtacaacgcaggcaccacggtgaaccccgcaacccccacctcccccagc
acacccgcctccaccccggccagcaacggaccccccgccatcgccagccagccggagacc
cccacgcagcctcccagcacaccacagacccccaccccgacaccagcccccacgccagca
cagccccagcccaagaagaacctttcacttacgagggaccagatgtatgcggcccaggaa
atgttcaagacggccaacaaggtcaccagaccagagaaggcgctcatcctcggcttcatg
gctggatccagagagaacccgtgcccggagcagggggacatcatccagatcaagctgagc
gagcacacggaggttttgcccaaagccgacggcaccggcagcaccaccatgctggtggac
accgtcttcgaaatgaactattccacaggacagtggactcgactcaaaaaatacaaaccc
atcaccaatacctcatga
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