Oryzias melastigma (Indian medaka): 112155834
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Entry
112155834 CDS
T07439
Symbol
ppp2r5b
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03015
mRNA surveillance pathway
oml04110
Cell cycle
oml04114
Oocyte meiosis
oml04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112155834 (ppp2r5b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112155834 (ppp2r5b)
04114 Oocyte meiosis
112155834 (ppp2r5b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
112155834 (ppp2r5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112155834 (ppp2r5b)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112155834 (ppp2r5b)
03036 Chromosome and associated proteins [BR:
oml03036
]
112155834 (ppp2r5b)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112155834 (ppp2r5b)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112155834 (ppp2r5b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112155834 (ppp2r5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
112155834
NCBI-ProteinID:
XP_024143553
Ensembl:
ENSOMEG00000008434
LinkDB
All DBs
Position
LG18:complement(12774149..12812987)
Genome browser
AA seq
520 aa
AA seq
DB search
METTKLPPSSPSSPTTSFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTPL
PLLKDAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGVLI
EPLYPEAIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDFQ
PSMAKRYIDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLRF
IYETEHFNGVAELLEILGSIINGFALPLKAEHKQFLVRVLIPLHTAKSLSIFHAQLAYCV
VQFMEKDATFVVQIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRIQEPLFKQI
AACISSPHFQVAERALYFWNNEYILSLIEENCQVILPLVFATLYRVSKEHWNQTIVSLIY
NVLKTFMEMNSKLFDDLTASYKVEKQKEMKRERERVELWRGLEEYQERRMQMLTEAARNQ
RNLQERGERGDPLSPTCPQTAHSDQPEPKPSGATSGETAT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaccaagctgcctccgtccagcccgtcctcgccgaccaccagcttctcggtg
ccctccgccgagaaggtggacggcttcccgcgcaggtccatgcgcagagcccggcagagg
aggtcccacagctcgtcccagttccgctaccaaagctcccaggtggagctcacccccctg
cccctgctcaaagacgccccggtggcagaattacatgacctgttctgtaagaagctgcag
cagtgctgcgtgctgtttgattttctggactgtgtggccgacctgaaagggaaggagatc
aaacgtgcggcgctcaacgagctggtggagagcgtggctacgagcagaggagtcctcata
gagcctctctacccagaggctataaagatgatctccgtaaatatcttccgcacgcttcct
cccagcgagaatccggagtttgatccagaggaagatgagccgacactggaagcctcctgg
cctcatctgcagctcgtgtacgagttctttctgcgtttcctggagagcccagacttccag
ccctccatggccaagcgctacatcgaccaaaagtttgtcctacagctcctggagctcttc
gacagcgaggaccccagggagagggagtacctgaagaccatcctgcaccgtgtctatgga
aaactgctgggcctccgagcctacatccgtaagcagatcaacaacatcttcctcaggttc
atttatgaaactgagcactttaacggcgtggcagagctgctggaaatccttggcagcatc
atcaacggcttcgctctgcctctaaaagccgaacacaagcagttcctggtccgagtcctg
atcccgctgcacacggctaagtcgctctccattttccacgcacagctggcctactgtgtg
gtgcagttcatggagaaagacgccacgtttgttgtgcagatcatccgagggctgctcaag
tactggccgaaaacctgcacacagaaagaggtgatgttcctgggggagatcgaggagatt
ctggacgtgatagagccgtctcagttcatccgcatccaggagcccctcttcaaacagatc
gccgcctgtatttccagcccccacttccaggtagcggagcgcgctctttacttctggaac
aatgagtacatcctcagcctgatagaggagaactgccaagtcatcctgcctctggtgttt
gccacgctctacagagtctccaaggaacactggaaccagactattgtgtctctgatctac
aacgtgctgaagaccttcatggagatgaacagcaaactgtttgatgacctcactgcctcc
tacaaagtggagaaacagaaggagatgaagcgtgagcgggagcgtgtggagctctggcga
ggcctggaggagtaccaggagcggcggatgcagatgctgacggaggccgccaggaaccag
cgcaaccttcaggagcgaggcgagagaggggaccccctgagccccacgtgcccccagacg
gctcactccgaccagccagagcccaaacccagcggggccacttccggagaaaccgccacc
tag
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