Oryzias melastigma (Indian medaka): 112155846 Help Entry 112155846         CDS       T07439                                  Symbol col4a6 Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism oml  Oryzias melastigma (Indian medaka) Pathway oml04382   Cornified envelope formation oml04510   Focal adhesion oml04512   ECM-receptor interaction oml04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oml00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112155846 (col4a6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     112155846 (col4a6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     112155846 (col4a6)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     112155846 (col4a6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oml04147]     112155846 (col4a6)    00536 Glycosaminoglycan binding proteins [BR:oml00536]     112155846 (col4a6) Exosome [BR:oml04147]  Exosomal proteins   Exosomal proteins of other cancer cells    112155846 (col4a6) Glycosaminoglycan binding proteins [BR:oml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112155846 (col4a6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  112155846 NCBI-ProteinID:  XP_024143577 LinkDB All DBs Position LG18:complement(19654307..19761304) Genome browser AA seq 1707 aa AA seqDB search MRLLPCVITAVLLQLGPARAGDKFDEPCNGLDCSKGCQCLPQKGARGQPGPLGEPGPSGL EGPQGGLGPRGPKGEGGHVGRKGPPGPKGDKGPMGVPGFSGSKGSDGHPGQPGERGPPGL DGCNGTKGEPGLPGLGTGSPGFPGRTGPAGPKGQKGEPRYFSPSGGLPGPPGLTGPTGFR GPDGPQGFPGQRGPEGFKGIPGPPGPPGSIDTGFDPQGPGEKGEKGDVGLPGPSGAPGSG SLTAPKILTIYKGDKGEPGPKGSVGFPGLPGLPGAFGYPGEIGEKGIPGYPGGRGAPGFN GPQGAPGLPGLRGDPGYSGSPGYDGPKGDPGDRGPRGPPIYVNNFGISAQGPPGDPGYSG APGVPGDQGPTGFPGLPGEPGRILPESPGLPGLPGLPGLEGEKGNPGPRLDGPEGLPGLP GPPGPPGPPGLQGPPGRTSDPCVIYPVNPKGSPQGGPSIPGVPGTPGARGPPGNRGFKGF RGDLGACACEGGGSSGAPGLPGPPGLNGSPGATGRKGELGDTGSPGFSGRSGPDGRPGNR GFSGPKGEKGESYVTQGFPIKGDRGAPGPRGPLGETGRPGRDGLPGFPGFPGIPGDPGFG TAGEKGFLGFPGSKGRPGGPGEPGIGYVGLPGLRGEPGDQGFSGLPGPPGLPGPRGESAC GRVNDAETGTGDLLPCSIPGQAGEPGIPGSPGRPGIKGQPGIPGEPGRPGLNGAKGERGD SGFGNQPGLPGFPGPRGDPGVPGVPGLRIDGPRGRNGVPGLPGAKGQPGEILGAIPGTPG RDGGPGIRGDKGQPGTPGVPGGPGLDGKIGIPGLSGERGTDGLPGLPGPPGLPGEGRGST PGPPGPPGNKGQSGSPGCPGFPGEKGDTGDPGFPGPAGMKGTPGFPGTPGTPGPRGPPGP PGPGTVDGFPGIPGVKGERGFVGLPGFPGQSGRPGTPGFPGGKGLPGEPGRNGSPGRLGP QGGRGDKGYPGLPGPPSIYTIPAEKGDRGDPGARGFDGFPGPRGDKGLPGLPGRQGRPGL PGLPEQSKGQPGQPGLPGLPGPPGFQGPKGEGGINGFPGMQGPRGDDGIPGAPGSPGEQG RPGGKGQPGETFGFPGSPGQKGQPGDPGSPGGRGFDGAPGDNGLPGIPGFPGIKGGPGEP GRPGSPGSVGFPGPKGLSSFPGRTGADGLPGQPGFPGGPGAKGLPGPPGLDGLNGLAGSK GLPGTPGATLGGRPGAPGIPGLKGERGDSYPGQRGFDGGKGQKGEPGLPGLSGNPGQPGL PGEPGFSSVSGPVGDPGLPGLDGNYGFQGRPGPPGPPGPGTVQGERGEPGLPGFPGSPGR KGEPGFNGGPGFSGNPGVKGSPGESGFSGLPGLKGTPGDPGFYGVKGPKGVTGQRGPKGL PGVLLPSPIVDGQSSGDMGLPGERGPFGYRGDSGWSGIPGRPGPKGRPGAPGNLGRTGPS GPPGPLGDPGPSGLPGSDGGQGPPGNVGPRGLPGPSTPSSSIGYTLVKHSQSEQVPMCPQ GMPSLWTGYSLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCFFASRNDKSYW LSTTAPIPMMPVSEAQIQPYISRCSVCEAPSQAVAVHSQDFTIPMCPRGWRSLWIGYSFL MHTAAGAEGGGQSLMSPGSCLEDFRATPFIECNGAKGTCHYFANKYSFWLTTVDPRREFV SSPSQETLKAGQERSRVSRCQVCSKVL NT seq 5124 nt NT seq  +upstreamnt  +downstreamnt atgaggctcctgccgtgcgtgatcaccgccgtgctgctgcagcttggacccgcgcgcgca ggggacaagtttgacgagccatgcaacggtctggactgcagcaaggggtgccagtgtctg cctcagaaaggggcccggggtcaaccagggcctctcggtgaacctggtcctagtggtcta gagggaccacaaggcggactgggccctcgagggccaaagggagagggaggtcatgttgga cgtaaaggaccacctgggcctaaaggagataagggaccaatgggagtgccaggattttcg gggagtaaaggcagtgatggtcatcctggtcagccaggtgagagggggccacctgggttg gatggatgtaacggaaccaaaggagaacccggtctgcctggtttgggaactggatctcct ggatttccaggacgtacaggtccggcggggccgaagggtcagaaaggcgagcccagatac ttctcaccgtccgggggtttgccggggcctcctgggctgacaggtccaactggcttccgc ggtcccgacggtcctcagggttttccaggtcaaagaggacctgaaggattcaagggcatt cctggtcctcctggccccccaggttcaatagacaccggttttgacccacagggaccagga gagaaaggagaaaagggcgacgtgggtcttcccggacccagcggtgctcccgggagcggg tctctaacagcccccaaaattctcactatctacaagggagataagggagaaccaggccca aaaggatcagttggattcccaggactacctggactgcctggagctttcggttatccaggt gaaatcggagagaaaggcatccctggatatcctggaggaagaggtgctccgggttttaat ggacctcagggcgctccagggttaccgggcctgagaggagacccaggatactccggcagt ccaggttacgacgggccaaagggtgacccaggagaccgtggtcctcgaggacctcccatt tatgtcaataattttggcatttctgctcaaggtcctccaggagatcctggctacagcggt gctcctggcgttcccggtgaccaaggacccacggggttcccgggacttccaggcgaacct ggacgtattctgccagagtcaccaggacttccaggtctacctggactacccggcctggaa ggagagaaaggaaacccaggcccacggcttgatggtcctgaaggactcccaggtctgcct ggaccacctggacctcctggacctcctggactccagggtcctcctggcaggacctctgat ccctgtgtcatctatcctgtcaatcccaaaggctctcctcagggtggccctagtatcccc ggagtacctggaacacccggcgccagaggaccgcctggaaaccgagggttcaaaggcttc agaggtgaccttggggcttgtgcctgtgagggagggggctcctcaggggcacctgggtta cctggacctcctggactcaacggcagccccggtgccactggaaggaagggggaacttggt gacacgggatcaccggggttcagtggccgttctggtcctgatggccggcctggtaacaga ggcttctctggtccaaaaggagaaaagggggagtcgtatgtaacgcagggctttccaatc aagggggatcgtggagcccctggaccccgaggacctctaggtgaaactggaagacctggc agagacgggcttcctggctttcctggattcccgggaattcctggcgaccctggcttcggt acagctggagaaaagggattcttgggcttcccgggaagcaaaggtcgtcctggaggccct ggggagcctggcattggctatgtagggctgcctggcttgcggggtgagcctggagaccaa ggtttttctgggctgcctgggccaccaggtttacctggaccaagaggtgaaagcgcctgt ggacgggttaatgacgccgaaacgggaacgggtgacttgttgccctgcagcatacctgga caagccggagagcctgggattcctggctcacctggacgcccaggcataaagggtcagccg ggtattcccggagaacctggacgtccaggacttaatggtgccaaaggggagaggggagat tctggctttgggaaccaacccggtttgccaggttttcccggacccagaggagacccagga gtcccaggtgttcctgggctgcgcattgatggacccagggggaggaacggtgttccggga cttcctggagccaaaggccagcctggagaaattcttggagccattcctggaactccaggg cgagacggtggacctggaatacgtggggacaaaggccagcccggcactccaggagttcct ggaggtcctggtttggatgggaagattggtattcctggattgagtggagaacgtggaact gatggtctgccgggtcttcctggtccacctggacttccgggtgagggtcgcggctccact cctggaccacctggacctcctggcaacaaaggacagagtggatcaccaggctgcccaggt tttcctggggagaaaggagacacaggcgatccgggtttcccaggacctgcaggaatgaaa ggaacccctgggtttcctggtactcctggaacaccagggccaaggggaccacctggacct ccaggacctggaactgtagacggatttcctggaattcctggagttaaaggggaaagaggt tttgttggactccccgggtttcctgggcagtctggacgacccggaacaccaggatttcca ggagggaaaggtctgcctggggagcctggaagaaatggatctcctggcaggcttggacct caaggcggcagaggtgacaaagggtatccgggtcttccgggcccccccagtatttacaca ataccagcggagaagggagaccggggagatcctggagccagaggctttgatggtttccct ggacccagaggtgacaagggtctgcccggactgccaggtcggcagggtcgtcctggcctt cctggtctacctgaacaaagtaaaggtcaacccgggcagccgggccttcctggactgcct ggacctccaggcttccaaggaccaaagggggaaggaggcatcaatgggttccctggcatg caaggaccaagaggagacgatggaatacctggtgcacctggaagtcctggagaacaaggt cgaccgggtggaaaaggtcaacctggggaaacttttggctttcccggctcacctggacag aagggtcaaccaggagatccaggcagcccaggtggtcgaggcttcgatggagcgcccggt gataatggcttacctggaatccctggtttccctgggataaaaggtggtcccggtgaacca ggacgacctggatcacctggatctgttggttttccgggccctaaagggctgtcatcattc cctggaagaactggagcagatgggctcccaggacagcctggatttccaggagggcctgga gccaaaggtttgcctggacctcctggcctggatggacttaatggcctcgctggatccaaa ggccttcctggaacaccaggtgctactctaggaggtcgccctggtgctcccggtattcca ggattaaagggagaaaggggcgattcctatccaggacaaagaggctttgatggagggaag ggacagaaaggagagcctggtcttcctggactctcaggaaatcctggtcaacccggactt cctggagagccagggttctcaagcgtttctggacctgtgggggatcctggactacctgga ttggatggaaactatggttttcaaggtcgacccggtcctcctggtccccctggtccagga acagtacaaggagaaagaggggagccagggctgccaggtttccctggatctcctggaaga aagggagaaccgggttttaatggaggccccggattctcgggtaatcctggtgtcaaagga tctcctggtgaaagtggttttagtggacttccgggcctgaaaggtacacctggagatcct ggtttctatggagtcaagggacctaaaggggtaacaggccagcgaggaccgaagggtctc ccaggagttttgctgccttccccaatcgtggatggacagtcttctggtgacatgggtctt cctggcgaaagggggcccttcggttaccgtggagactctggttggagtggtattccaggg cgccccggtccaaagggacgccctggagccccaggtaacctcggaaggactggaccgtct ggacctcctggtccgttgggtgatcccgggccgtctggtttacctggatcagatggaggg caaggcccccctgggaacgttggcccccgtggccttcctggaccctccacccccagcagc agcatcggctacacgctggtgaagcacagccagagcgagcaggtccccatgtgtcctcag ggcatgccttcattgtggaccgggtacagcttgctatatgtggaggggcaggagaaggca cacaaccaagacttgggtcagcccggctcgtgcctccccaggttcagcaccatccccttc ctgtactgctcccccaacgaggtttgcttctttgctagtcgcaacgacaaatcttactgg ctctccacaactgcccccattcccatgatgcccgtgtctgaggcgcagatccagccttac atcagcaggtgttcagtgtgtgaggctccatctcaggctgtggcggtccacagtcaggac tttaccatccccatgtgtcctcgagggtggagaagtctctggattggatattccttcttg atgcacacggcggctggcgcggaaggcggcggtcagtccctgatgtctcccggctcctgc ttggaggatttccgcgccactccgttcatcgagtgcaatggcgccaaaggcacgtgccac tacttcgccaacaagtacagcttctggctgaccacggtggatcccaggcgggagttcgtg tcctcgcccagccaggagacgctgaaagcgggccaggagcgctccagagtcagtcgctgt caggtctgcagcaaagtgctgtag

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