Oryzias melastigma (Indian medaka): 112156074
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Entry
112156074 CDS
T07439
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112156074 (sorcs2)
Membrane trafficking [BR:
oml04131
]
Protein recycling
Others
Others
112156074 (sorcs2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
112156074
NCBI-ProteinID:
XP_024143993
Ensembl:
ENSOMEG00000003445
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Position
LG18:complement(21044854..21355324)
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AA seq
1185 aa
AA seq
DB search
MAPLRRAVDGAWHGHASTLSTLLPPLYHSLSFTTHLSISHSISSISISLRATTEYSMAPL
RAGKPSAAAAAAARLLFFFTLAASAWMSPARSHGVALNRQDLGGGGGGSPLGSDARGTSA
RLRRALSRDKQLSLLSSSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADSTKVLESS
LWRSSDYGTTYTKLNLMPGTTIVVTSFYICPSNKKKVILVGSSINERDQMLFISTDEGSS
FQRQMIDFTPETLLFHPKEEDKVLAYCKEGRLFASSDLGRKWTLLQERVTKDRVFWSVSG
VDVDPDLVHMEIQDASGGNLYVTCHIQNCSEKMVTAQFLGKIDRNSLLVQDDYIFVKVTT
GNRTKHYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVFLALQEWYQSDTYNLYQSDPQ
GVYYSLVLENVRSAKQPEENVLIDVLEVRGVKGVFLANQKVDGKVRTLITYSKGRNWEPL
APPTTDMNNKPVSCKAPDCQLHLHLRWADNPYVSGTVHTKDSAPGLIMGAGNIGSKLIEY
KEEMYVTSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSIDEGRTWSIHN
FTTTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFSRQCADSDYESWGLT
DLQGERCIMGREQTFRKRKDTSFCIKGKSFTSVLSSKPCSCTEKDFSCDFGFERSHTEAD
RCFADFWFDPDSPPEDCHLGQNYESSTGYRKVISNTCEGGLNQQQSSKKHSCPLLAPRRL
QVGIKGQMLAVAPGDDITFIIHQEQGDTSSTKYQVDLGDGVRAIYQNLTVTDEPIQHRYE
TPGVYKVTVKAENGAGHDEATMYIQVTAPLHEVHLEVVPIARRNQEVNLTAVVLPAEANL
TVFYWWIGDNLQPVLTLQNSLLTRFPNTGEVSVTVQASNGRSMVKDTRIVRVYDKFHIIP
VSFSRNLDRYNPNIPEWRDDVGQVVSKILSKSTGVPQESLVTVVKAGLPTTADLYILSAD
STAAQTSMAVDKHIPAVLQAFSSNNISFMIRGGQRVSAMLADPNSGYRGAAGGPGVWALA
VIFLISIIATSSFILYKFKSPWLRTEDAYPPLCFRKLRGNHSIYAQMHNEKEQEMTSPVN
HSEDTQHIIQGDEFIDDDLDTHTLGNHSGVVLRINSRELQSYVTS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgctgcgccgtgctgtggatggcgcttggcacggacacgcgtccacgttgtcc
acactccttccccctctctatcactctctctccttcaccacacacctctctatctcccac
agcatcagcagcatctccatcagtctccgcgctactacggagtacagcatggcacctctg
cgcgctggcaagccgtccgccgccgcggccgccgccgcgcggctcctcttcttcttcacg
ctggccgcctcggcctggatgtcacccgcgcgctcccacggcgtggctttaaaccggcag
gatttgggaggtggaggaggaggctccccgctgggctcggacgcgcgcgggacctcagcc
cgcctccggagagcgctgtcccgggataaacagctctccctgctgagcagctcgttcgtg
ctcaagggggacgcgacccacaaccaggcgatggtccactggacaggagagaacagcagc
gtcatcctgatcctgactaaatactaccacgctgattccacaaaggtgctggagagctcg
ctgtggaggtcatcagactacggcacaacctacaccaaactaaacctgatgccagggaca
accatcgtggtgacgagtttctacatctgtcccagtaacaagaaaaaggtgattctggtg
ggctcgtccataaatgagcgtgatcagatgctcttcatcagcacagacgagggctcctcc
ttccagcggcaaatgatcgacttcacgccggagacgctcctgttccatcccaaagaggag
gacaaggtgctggcctactgcaaagagggcaggctctttgcgtcctcagatctgggccgt
aaatggactttactgcaggagagggtgaccaaggacagagtcttctggtctgtttccggt
gtggatgtggatcccgatctggtccacatggagattcaggatgccagtggaggtaacctg
tacgtcacctgtcacatccagaactgctcagagaagatggtgacagctcagttcctcggg
aaaattgatcgtaactctctgctggtgcaggatgactacatatttgtgaaggtcaccaca
ggaaatcggactaaacactacgtctcctatcggcgcaacgagtttgtccagatgaggttc
cccaagtacgcattaccaaaggacgtgcagatagtgagtacggatgagaaccaggtcttc
ctggccctgcaggagtggtaccagtccgacacctataacctgtaccagtccgacccccaa
ggcgtgtactactccctggtcctggagaacgtgcgcagtgccaagcagccagaggagaac
gtgctcatcgacgtcctggaggtacgtggagttaaaggagtcttcttggccaaccagaag
gtcgacggtaaagtgaggacgctcatcacctacagcaaaggacgcaactgggagccactg
gcgccccccaccaccgacatgaacaacaaacccgtcagctgtaaagcgccggattgtcag
ctccacctccacctgcgctgggccgacaatccttacgtgtctggaacggttcacaccaaa
gactcggcgcccggcctcatcatgggagctggaaacatcggctccaaactcatcgagtat
aaggaggagatgtacgtcacttcagactgtgggaagacgtggagacaggtcttcgaggag
gaacatcacatcctttacctggaccacggtggagtcatcgttgccatcaaggacacgtct
attcctctgaagatactcaagttcagcatcgacgaaggtcggacgtggagcattcataac
ttcaccaccacctccgtgtttgtcgacggactcctgagcgaaccgggagacgagactctg
gtcatgaccgtgttcggacacatcagctacaggtccgactgggagctggtcaaagtggac
ttcaggcagtcgttttctcgccagtgcgctgactcggattacgagtcctggggactcaca
gacctgcagggagagaggtgcattatgggtcgggagcagacgttcaggaagaggaaggac
acgtctttctgcattaaaggaaaaagcttcacgtcagtcctcagcagcaaaccctgcagc
tgcacagagaaggacttcagctgtgactttggtttcgagcgctcccacacggaggcggat
cgctgctttgctgacttctggttcgaccccgactcccctcctgaggactgccatctggga
cagaactacgagtccagcaccggctacaggaaggtcatctccaacacatgtgaaggagga
ctaaaccagcagcagagctccaagaagcacagctgccccctgctggcccccaggcggctg
caggtggggatcaaaggtcagatgctggcggtcgctccaggtgacgacatcaccttcatc
atccatcaggagcagggcgacaccagcagcaccaagtaccaggtggatctgggcgacggc
gtccgggccatctaccagaacctgacggtgacggacgagcccatccagcaccgctacgaa
accccgggcgtgtacaaagtcaccgtgaaggcggagaacggcgccggccatgacgaggcc
accatgtacatccaggtcacagctcctctgcatgaagtgcacctggaagtggttcccatc
gcgagaaggaaccaggaagtcaacctgacagctgtggttctgccggctgaggccaatctg
accgtcttttactggtggatcggagacaacctacagccggttctgactctgcagaacagc
cttctgactcgcttcccaaacaccggagaagtgtctgtgacggtccaggcttccaacggc
agatccatggtcaaggacacccgcatcgtcagagtctatgataaattccacatcatcccg
gtcagcttcagcagaaacctggaccgctacaaccccaacatcccagagtggagggacgac
gtcggccaggtggtctccaaaattctgtccaagtccacaggcgtccctcaggagtccctg
gtgacggtggtgaaggcgggccttcccaccacggctgacctctacatcctctcagcagac
agcacagcagcccagaccagcatggccgtcgataagcacattccagccgttcttcaagct
ttcagcagcaacaacatcagcttcatgatccgaggaggccagcgagtgtcggccatgttg
gccgacccaaactcaggctaccgcggggcagctggagggcctggagtttgggccttagct
gtcatcttcctcatcagcatcatcgccaccagctccttcatcctctacaagttcaagagt
ccttggctcaggactgaggacgcctatccccctctgtgtttcaggaagctgcgtgggaac
cacagcatctacgctcagatgcacaacgagaaggagcaggagatgaccagccccgtcaac
cacagcgaggacacccagcacatcatccaaggcgacgagttcatcgacgacgacctggac
acgcacactctaggtaaccactcaggtgtcgtccttcgcatcaactccagagaactgcaa
agctacgtgaccagctga
DBGET
integrated database retrieval system
