Oryzias melastigma (Indian medaka): 112156089
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Entry
112156089 CDS
T07439
Symbol
chrnb1l
Name
(RefSeq) cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112156089 (chrnb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112156089 (chrnb1l)
Ion channels [BR:
oml04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112156089 (chrnb1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112156089
NCBI-ProteinID:
XP_024144014
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All DBs
Position
LG18:complement(6406764..6419493)
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AA seq
503 aa
AA seq
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MIDMVGQTKMKSSLRTSIIVFVCSSFCLALTGASETEKKLHQKLFQNYNLKVRPARYWEE
KVMVRVGMTLSQLVSLNEKNGEMTTNVYMNMEWSDYRLSWKPEEYDNIKVLRVPAKKVWR
PDIYLINNNDGQFDVALYVNVLVYSNGKINWLPPAIYRSSCSIDVAYFPFDWQNCSMVFR
SYTYDASEVDLQYFLDDDKKEIHDIVIDENAFTENGEWAICHKPTRKNVKDDLYEDITFY
LIIERKPLFYIINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADKV
PETSLSTPIIVNYVMFTMILVTFSVILSVVVLNLHHRTSSTHIMPNWVRKVFIHILPKYI
GMMRPKIEDPLLEEESSEDSSTTRGFVGRHPGGEYFFRKINPDLVLPWRGRCESTVHLQR
LPNTDSYCLVLPPNLKSAIAAVTYMAEQLRKQDTDDTMTGDWQFIALVVDRLFLWLFVII
TTLGTLAMFLDASFNYTPDNPFP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatggtgggccaaacgaagatgaagtccagtctgaggacgagtatcatcgtc
tttgtgtgcagctccttttgtctggctttgactggagcctctgagacagaaaaaaaactc
catcagaaattattccagaactacaacttgaaagtccgtccagctcgctactgggaggag
aaggtgatggtgcgggtggggatgaccctttcccaacttgtcagcttgaacgaaaagaat
ggtgagatgacaacaaacgtctacatgaacatggaatggtcagactacaggttgtcatgg
aaaccagaggaatatgacaacattaaggttttgagagttccagccaaaaaggtttggcgt
cccgacatctacctcatcaacaataatgacggccagtttgacgtggctttgtatgtcaac
gtcctggtgtacagcaatgggaaaatcaactggttaccgccagccatctaccgcagttcc
tgctctattgatgtggcttactttccatttgactggcagaactgcagcatggttttccgg
tcatacacctacgatgcttcggaggtcgacctacagtattttctcgatgatgacaaaaaa
gaaatacatgatatcgtcatagatgaaaatgctttcactgagaatggagaatgggccatc
tgtcacaaacccacaagaaagaatgtcaaggatgacctgtatgaggacatcaccttctat
ctcatcatcgagaggaaacctctgttctacatcatcaacatcatcgtgccctgcatcctc
accagcgtgctggctatatttgtcttctatctgcctcctggagcaggagagaagatgacc
ctttccatttccgtcctcatcgctctcactgtcttcatgttgctgctggccgacaaggtg
ccagagacgtccctcagcacccccatcatcgtcaactacgtcatgttcactatgatcctc
gtcaccttctctgtcatcctgagcgtggtcgtcctcaacctccaccaccggacgtccagc
acgcacatcatgcctaactgggtcagaaaggtgtttatacacatcttgccgaaatacatt
ggtatgatgagaccgaaaatagaggatcccctgctggaggaggagtcttctgaggacagc
tccacaacccgaggttttgtagggagacatccgggaggagagtacttctttcgcaagatc
aacccagatcttgtgttgccctggagaggcagatgtgagagcaccgtccaccttcagcgg
ctccccaacaccgacagctactgccttgtcctccctcccaacctgaagtcggccatcgcc
gccgtcacctacatggcggagcagctgaggaagcaggacacggacgacacgatgacagga
gactggcagtttatcgccctggtggtggaccggctcttcttgtggctgtttgtcatcatt
accaccctgggaaccctggccatgttcctggacgccagcttcaattacacaccggataac
ccattcccgtag
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