Oryzias melastigma (Indian medaka): 112156106
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Entry
112156106 CDS
T07439
Symbol
kirrel1a
Name
(RefSeq) kin of IRRE-like protein 1a isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112156106 (kirrel1a)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Kirrel/Neph family
112156106 (kirrel1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_5
Ig_4
Syndecan
Ig_6
DUF347
Motif
Other DBs
NCBI-GeneID:
112156106
NCBI-ProteinID:
XP_024144034
Ensembl:
ENSOMEG00000006264
LinkDB
All DBs
Position
LG18:25617668..25664400
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AA seq
831 aa
AA seq
DB search
MQRLLLLSLVFTFQTVRTARFSQEPADQSVVRGQRVILSCVVFNYSGIVQWTKDGLALGI
GEDLRAWPRYRVLRVQESGQYNLEILSADLSDDSVYECQAPDAALRSRRAKLTVLIPPDD
PVIDGGPEVLLNAGESYNLSCVSRGAKPPSTIEWLKDGLPVEGAVSITEVLADRKRVTTR
SHLPIHPVDTDTGRNYSCVTSNLAVPTGKSTTVTLNVHHPPVVTLSIEPRSVLEGDRVTF
TCQAHANPPIMGYRWAKGGVVLQGARESVFTTKADHSFFTEPVSCLVFNAVGKTNVSILV
DVQFGPILLVEPQPKTVDVDSDVTLNCKWAGNPPLTLTWFKKGSNMVLSNSNQLHLKSVS
QADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSDPVQYAGRGERGEVKCYIASTPPPD
KIVWAWKENVWEKERGTLQERYTVEQSKLSAEGGGVLSTLTINNVMESDFLSTYNCTAWN
SFGPGTMIITLEETEEVPVGIIAGGTVGSTILLFIFLLVLVLIFYRQRKGSRRGVTLGKP
DIKVETINKETHSLEEDSGSVSTASRMVKAVYSFLPSVSFSPSNQPFKDDIELKSDLRSD
TLDTRQEYDLKDPTNGYYNVRASTHDEIHPASRSTMHYSDYRSPGGTPGGAASISSSTGG
SGATASGGTPGAPGPLTSPGRPQACYDPRPSSRLSHISYAQFNTFTRGGQTQQPPAANPV
SAASDFPADCSLLDSTSQLAYDYGYPSHYQTYRMGFAPSSLAPLEAGPSYEMYGVGSGVS
SPGVGVSPGGPAPSGSDTGLGKYGSSTRFSYTSQHSEYSHSRHTQRMQTHV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcagagactgctgctcctcagtctggtgttcaccttccaaaccgtgaggacggcgagg
ttctctcaggagccggcagaccagtcggtggtccggggccagagggtgatcctgtcctgt
gttgttttcaactactccggcattgttcagtggaccaaggatggcttggctctggggatc
ggcgaggacctccgggcctggcccaggtaccgtgtgctgcgtgtccaggagtcgggtcag
tacaacctggagatcctgtcagccgatctatctgatgactccgtgtacgagtgtcaggcc
cccgacgccgccctgaggtccaggagagccaaactcactgtcctcatccctccagatgat
ccggtgatcgacgggggtccggaggtcttgctgaatgcgggggagtcctataacctgagc
tgtgtgtctcgaggggccaaaccaccttccactatcgagtggcttaaagatggactcccc
gtggagggcgccgtcagcatcacggaggtgcttgcagacaggaagagggtgaccacacgg
agccaccttcctatccaccctgtcgacaccgacaccgggaggaactacagctgtgtgacc
tccaacctggccgtgcccaccggcaaaagcacaaccgtcacccttaacgtgcatcatcca
ccagtagtgaccttgtccattgagccgcgctctgtcctggaaggagacagagtcactttt
acctgccaggctcatgccaaccctcccatcatgggctacaggtgggctaaaggcggcgtg
gtgctccagggcgccagggagagcgtgtttaccaccaaggcggaccactcctttttcacc
gagccggtgtcctgtctggttttcaatgctgtggggaagactaatgtcagcatcctcgtg
gatgttcagtttgggccgatcctgttagtggaaccgcagccaaaaacagtcgatgtcgac
tcggacgtcacgctcaactgcaaatgggcgggaaaccccccactcactctcacctggttc
aaaaagggctccaacatggttctgagtaacagcaaccagctgcatctgaagtcagtgagc
caggcggacgccggccagtacgtgtgcaaggccatcgtcccacggatcggcgtgggagag
accgaggtcacactcaccgtcaacggcccccccatcatctccagtgaccctgtccagtac
gccgggaggggggagagaggagaggtgaagtgctacatcgccagcaccccccctcctgat
aagatagtgtgggcttggaaggagaacgtatgggagaaggagagggggacactgcaggag
aggtacaccgtggagcagagcaaactgtccgccgagggcggcggggtcctctccaccctc
accatcaacaacgtgatggagtctgacttcctgtccacctacaactgcacggcctggaat
tcctttggcccgggcaccatgatcatcacgctggaggagacagaggaggttccggtgggg
atcatagccggtgggacggtgggttccaccatcctgctcttcattttcctcctggttctg
gttctgattttctaccgccagcgtaaaggcagccggcgcggggtcacgctgggtaaaccc
gacatcaaggtggagacgataaacaaggagacccacagcctggaggaggactcgggcagc
gtgtccacggcctcacgcatggtcaaggctgtatactcgtttctcccctctgtgtccttc
tctccctccaatcagccttttaaagatgacatagagctcaagtctgacctccgcagcgac
accctggacacccgccaggagtacgacctgaaggacccgaccaatggatactacaacgta
cgggcctccacccatgatgaaatccaccccgcctcccgctccaccatgcactactctgac
tatcgctcccctggagggacaccagggggcgcggcgtcaatcagcagcagcactggaggc
tctggagccacggccagtggaggaacccccggggcccctggtccactcacgtccccgggg
cgcccacaggcttgctatgaccccagaccatcatccagactgtcccacatcagctacgcc
cagttcaacactttcacccgcgggggccaaacacagcagcccccagcagccaatcctgtt
tcggcagccagcgacttcccagcggactgcagcctcctggactccacctcccaactggcc
tatgactatggatacccgtcgcactaccagacctaccgcatgggatttgcaccgtccagc
ctggctcctctggaggccggcccctcctatgagatgtacggagtggggtctggggtcagc
agccccggagttggggtcagccctgggggcccagctcccagcggatcggacaccggacta
ggaaaatacggcagctccactcgcttctcctacacctcgcagcactccgagtactcccac
agtcgacacacgcaaagaatgcagactcacgtgtga
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