Oryzias melastigma (Indian medaka): 112156117
Help
Entry
112156117 CDS
T07439
Symbol
ntn5
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112156117 (ntn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112156117 (ntn5)
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Axon guidance molecules
112156117 (ntn5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
OTO1
Motif
Other DBs
NCBI-GeneID:
112156117
NCBI-ProteinID:
XP_036072722
LinkDB
All DBs
Position
LG18:complement(14525622..14544637)
Genome browser
AA seq
810 aa
AA seq
DB search
MMFRPFSPSPSTLLVPILLRLFILILPSAPAWSSFSHTPLSWTSPHDPCYHPDGRPRHCL
SEFINAAYGVPVDASHSLRVHDTDGNVTTLTDLHNPNNLTCWMAHAGHDTGDWVLTLPLG
RRFEITYISLQFCNQEEPPDPISLSILKSMDYGRSWRPMQHYSSDCVVHFQQPAQTIAQT
RHQETDALCSDPRPFQKQKGGAVLAFSALDGRPSSPDFDYSPTLQDWVTATDIRIVFHQI
SKNLKAGSFERPKEAPRNDGAGDARGTGSLTWRSDVQSHTGGQRGSMNIDNVLLFLDGKS
KNTDVSEKKSSSQSRKGHRKGTAQDEDGYNVTSKEGEDLLIMDSLAVPKKGGKVRGGARK
KEDNHLVSCPSGGCKWTVEGRGRKSKGRELRKRRNNNLNTRPGVRNLQVVQPLTFVSPVQ
PPLAISDLQVGGRCKCNGHASRCRRDDTGRAVCVCEHHTAGPDCDVCADFYVDRPWHRAT
PTHPNPCVACECNGHSNKCRFSMEVFLQSGRKSGGVCQKCRHNTAGRHCQYCQNGYTRDH
SKALSHRKACQPCQCHPVGAVGRWCNQTSGQCLCRDGVTGLRCNRCAPGYKQGKSPLRPC
IRIQEAAPTPVYQPQYSIAEECVSYCQPAQAKVRMNLETYCLKDYVLKVQVKGMERSGPW
WQFSISVQVVFRTRSPSRVRRGPQSLWVPNRDLACGCPALHVGRTFLLIGAEDGERGWGP
EESRLVADRSTLALQWREHWSPKLRAFRGQDKRGRCPSKSEHGKPNADPQPGYVPPHLRG
ESEANAHSAEGTETPPTSSAASPVCSTPNA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgtcccttctccccttccccctccaccttgctggttcccattctcctcaga
ctcttcattctcatccttccctcggctcctgcctggtcttctttttcccacaccccgcta
agctggacttcccctcatgacccctgctaccaccctgatggtcgtcctcgccactgcctg
tcagagttcatcaacgccgcctatggggtcccggtcgatgcgagtcactcgctgcgtgtg
cacgacacggatggcaacgtcaccaccttgacagacctccacaatcctaacaacctcacc
tgctggatggctcacgcgggtcacgacaccggggactgggtcctcacccttccgctgggc
cgccgatttgaaattacctacataagcttgcagttctgcaaccaggaggagcccccagac
cccatctccctgtctatcctcaaatcgatggactatggacgctcgtggcggcccatgcag
cactactccagcgattgcgtcgtacacttccagcagcccgcccagactatcgcccaaacg
aggcaccaggagacagatgctctttgttcggaccctcgcccctttcagaagcagaaggga
ggggcggtgctcgccttctccgctctggatgggcggccgtcctctcctgatttcgactat
agccccaccctacaggactgggtgacggctacagacatccgcatagtcttccatcagatt
tccaaaaatctcaaggcgggcagctttgaaaggccaaaagaggcgccaaggaatgatggt
gcaggtgatgcaagaggaactggaagtctaacgtggagatcagacgtccaaagtcacact
gggggtcagagaggctctatgaacatagacaatgtgcttctgtttttagacgggaaatct
aagaacactgacgtcagcgaaaagaagtcaagcagtcagagtagaaagggtcaccgaaag
gggacagctcaagacgaagacggatacaatgtgaccagcaaggaaggagaagaccttctt
atcatggattcactcgctgttccaaagaaaggcggaaaggtcagaggtggtgctcgcaaa
aaagaagataaccacttggtgtcttgcccaagtgggggctgtaaatggacagttgagggg
cggggcaggaagagcaaggggagggaactgaggaagagaaggaacaataatttaaacaca
agaccaggagtcagaaaccttcaagtggtgcagccccttacctttgtctctcctgtccaa
cctcctctagccatttctgacctgcaagtcggaggcaggtgtaaatgcaacggacacgct
tccaggtgtcgccgtgacgacacgggccgcgcggtgtgcgtgtgcgagcatcacactgcg
gggccagactgtgatgtgtgcgcggacttctatgtggacagaccatggcatcgggcgacg
cccactcacccgaacccatgtgttgcatgcgagtgcaacggccactctaacaaatgccgc
ttcagcatggaggtgttcctgcagtcgggccggaagagcggaggtgtttgccaaaagtgt
cgccacaacacggcaggacgccactgccaatactgccagaacggctacacccgcgaccac
agcaaggcgctcagccatcgcaaggcctgccaaccgtgtcagtgccatcccgtgggtgca
gtgggtcgatggtgcaaccagacgtcaggtcagtgtttgtgccgagatggagtgacgggc
ctgaggtgtaaccgctgcgcaccaggatacaaacagggcaagtcgcctctgcggccctgc
atacggattcaggaggccgctccgaccccggtgtaccaacctcagtacagcattgctgag
gagtgcgtttcatactgtcagcccgctcaggctaaagtcaggatgaacctggagacatat
tgtctcaaggattacgtgctgaaggtgcaggtgaaggggatggagcgctccggtccctgg
tggcagttctccatctctgtgcaggtcgtcttccgcacgcgctccccctcccgggtccgc
aggggcccccagtctctctgggtccccaaccgggacctggcgtgcggctgccccgccctc
cacgtgggccggacgttcctcctgatcggcgcagaggacggcgagcggggctggggccct
gaggagagccgcctggtggcggaccgctccaccctggccctccagtggcgggaacactgg
agccccaaactcagagccttccggggtcaggacaaacggggccgctgtccttctaaatct
gagcacggcaaacctaacgcagacccccaacccgggtacgtgccccctcacctgcggggt
gagagtgaggcaaacgcacattctgcggaagggacagagactccgcccacttcttctgct
gcttctccagtgtgttcgactccaaacgcctga
DBGET
integrated database retrieval system