KEGG   Oryzias melastigma (Indian medaka): 112156117
Entry
112156117         CDS       T07439                                 
Symbol
ntn5
Name
(RefSeq) netrin-1
  KO
K06843  netrin 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    112156117 (ntn5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oml00536]
    112156117 (ntn5)
Glycosaminoglycan binding proteins [BR:oml00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   112156117 (ntn5)
SSDB
Motif
Pfam: Laminin_N EGF_laminin NTR EGF_LMN_ATRN OTO1
Other DBs
NCBI-GeneID: 112156117
NCBI-ProteinID: XP_036072722
LinkDB
Position
LG18:complement(14525622..14544637)
AA seq 810 aa
MMFRPFSPSPSTLLVPILLRLFILILPSAPAWSSFSHTPLSWTSPHDPCYHPDGRPRHCL
SEFINAAYGVPVDASHSLRVHDTDGNVTTLTDLHNPNNLTCWMAHAGHDTGDWVLTLPLG
RRFEITYISLQFCNQEEPPDPISLSILKSMDYGRSWRPMQHYSSDCVVHFQQPAQTIAQT
RHQETDALCSDPRPFQKQKGGAVLAFSALDGRPSSPDFDYSPTLQDWVTATDIRIVFHQI
SKNLKAGSFERPKEAPRNDGAGDARGTGSLTWRSDVQSHTGGQRGSMNIDNVLLFLDGKS
KNTDVSEKKSSSQSRKGHRKGTAQDEDGYNVTSKEGEDLLIMDSLAVPKKGGKVRGGARK
KEDNHLVSCPSGGCKWTVEGRGRKSKGRELRKRRNNNLNTRPGVRNLQVVQPLTFVSPVQ
PPLAISDLQVGGRCKCNGHASRCRRDDTGRAVCVCEHHTAGPDCDVCADFYVDRPWHRAT
PTHPNPCVACECNGHSNKCRFSMEVFLQSGRKSGGVCQKCRHNTAGRHCQYCQNGYTRDH
SKALSHRKACQPCQCHPVGAVGRWCNQTSGQCLCRDGVTGLRCNRCAPGYKQGKSPLRPC
IRIQEAAPTPVYQPQYSIAEECVSYCQPAQAKVRMNLETYCLKDYVLKVQVKGMERSGPW
WQFSISVQVVFRTRSPSRVRRGPQSLWVPNRDLACGCPALHVGRTFLLIGAEDGERGWGP
EESRLVADRSTLALQWREHWSPKLRAFRGQDKRGRCPSKSEHGKPNADPQPGYVPPHLRG
ESEANAHSAEGTETPPTSSAASPVCSTPNA
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgatgttccgtcccttctccccttccccctccaccttgctggttcccattctcctcaga
ctcttcattctcatccttccctcggctcctgcctggtcttctttttcccacaccccgcta
agctggacttcccctcatgacccctgctaccaccctgatggtcgtcctcgccactgcctg
tcagagttcatcaacgccgcctatggggtcccggtcgatgcgagtcactcgctgcgtgtg
cacgacacggatggcaacgtcaccaccttgacagacctccacaatcctaacaacctcacc
tgctggatggctcacgcgggtcacgacaccggggactgggtcctcacccttccgctgggc
cgccgatttgaaattacctacataagcttgcagttctgcaaccaggaggagcccccagac
cccatctccctgtctatcctcaaatcgatggactatggacgctcgtggcggcccatgcag
cactactccagcgattgcgtcgtacacttccagcagcccgcccagactatcgcccaaacg
aggcaccaggagacagatgctctttgttcggaccctcgcccctttcagaagcagaaggga
ggggcggtgctcgccttctccgctctggatgggcggccgtcctctcctgatttcgactat
agccccaccctacaggactgggtgacggctacagacatccgcatagtcttccatcagatt
tccaaaaatctcaaggcgggcagctttgaaaggccaaaagaggcgccaaggaatgatggt
gcaggtgatgcaagaggaactggaagtctaacgtggagatcagacgtccaaagtcacact
gggggtcagagaggctctatgaacatagacaatgtgcttctgtttttagacgggaaatct
aagaacactgacgtcagcgaaaagaagtcaagcagtcagagtagaaagggtcaccgaaag
gggacagctcaagacgaagacggatacaatgtgaccagcaaggaaggagaagaccttctt
atcatggattcactcgctgttccaaagaaaggcggaaaggtcagaggtggtgctcgcaaa
aaagaagataaccacttggtgtcttgcccaagtgggggctgtaaatggacagttgagggg
cggggcaggaagagcaaggggagggaactgaggaagagaaggaacaataatttaaacaca
agaccaggagtcagaaaccttcaagtggtgcagccccttacctttgtctctcctgtccaa
cctcctctagccatttctgacctgcaagtcggaggcaggtgtaaatgcaacggacacgct
tccaggtgtcgccgtgacgacacgggccgcgcggtgtgcgtgtgcgagcatcacactgcg
gggccagactgtgatgtgtgcgcggacttctatgtggacagaccatggcatcgggcgacg
cccactcacccgaacccatgtgttgcatgcgagtgcaacggccactctaacaaatgccgc
ttcagcatggaggtgttcctgcagtcgggccggaagagcggaggtgtttgccaaaagtgt
cgccacaacacggcaggacgccactgccaatactgccagaacggctacacccgcgaccac
agcaaggcgctcagccatcgcaaggcctgccaaccgtgtcagtgccatcccgtgggtgca
gtgggtcgatggtgcaaccagacgtcaggtcagtgtttgtgccgagatggagtgacgggc
ctgaggtgtaaccgctgcgcaccaggatacaaacagggcaagtcgcctctgcggccctgc
atacggattcaggaggccgctccgaccccggtgtaccaacctcagtacagcattgctgag
gagtgcgtttcatactgtcagcccgctcaggctaaagtcaggatgaacctggagacatat
tgtctcaaggattacgtgctgaaggtgcaggtgaaggggatggagcgctccggtccctgg
tggcagttctccatctctgtgcaggtcgtcttccgcacgcgctccccctcccgggtccgc
aggggcccccagtctctctgggtccccaaccgggacctggcgtgcggctgccccgccctc
cacgtgggccggacgttcctcctgatcggcgcagaggacggcgagcggggctggggccct
gaggagagccgcctggtggcggaccgctccaccctggccctccagtggcgggaacactgg
agccccaaactcagagccttccggggtcaggacaaacggggccgctgtccttctaaatct
gagcacggcaaacctaacgcagacccccaacccgggtacgtgccccctcacctgcggggt
gagagtgaggcaaacgcacattctgcggaagggacagagactccgcccacttcttctgct
gcttctccagtgtgttcgactccaaacgcctga

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