Oryzias melastigma (Indian medaka): 112156145
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Entry
112156145 CDS
T07439
Name
(RefSeq) uncharacterized protein LOC112156145 isoform X1
KO
K06252
tenascin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
oml04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112156145
04518 Integrin signaling
112156145
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112156145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oml00536
]
112156145
Glycosaminoglycan binding proteins [BR:
oml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112156145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
D8C_UMOD
fn3
Lectin_C
Motif
Other DBs
NCBI-GeneID:
112156145
NCBI-ProteinID:
XP_024144090
LinkDB
All DBs
Position
LG18:complement(8016007..8057793)
Genome browser
AA seq
2798 aa
AA seq
DB search
MDLWLFVCILTGALFSVSFAQTHQFYFVSTELNWTDAQSFCRREYSDLATIENTVDVDAV
LNTTLNYTGKVWIGLHDDLENSWKWSLNDSSFCVEGEQTFKNWQLNQPDNLNGQQYCVGL
QSGNSSRGNWDDRDCNEEHGFVCYNGTVNGILSFVVGDATLNWREAQRYCRKNFIDLASI
QNQTENDVINILANGSFVWLGLYRHKVWSDGRNSVFEHWTENQPDHGDQKCIAASFSDSG
RWSDEFCSQSLPFICYGSALPNAGFIPFSQNETSITLQWNKGNSSDSFVLQFNGTETNIS
ASDGDGPINYTVSSLTAGTKYTFTLLSRSSLTRVNINAVTAPQNVEYFNVLEKSDTSITL
QWSEVINASYILQFNSELRAIPASGDGPVTYTVVSLYASTEYIFTLFTVFENATSTGVQL
RVVTDYWRYSCGQGSCPTDHVCININGTYQCLDGCNHYTALSDDWLSEYNINGNSYCNGN
YYPSNWYRMFVGKSSAQIPETCVRDSRCSSYRIWATTPHPVHYNESATLTTYTARDSNCY
YDTYYYSNRVMARLCYGDYYVYRLPRLPGCEYSYCAVPPHGFRSSGQNETSITLRWDKVN
NSVSFVLLFNGTETNISAPAGSEPVTYTVSSLSPATKYTFTLFSVFENVRSSGISIDGVT
APQRVETFNVVENTDRSVTLQWSKVNFASYVLQYNQGWKNVSASDGDGLITYTVPSLRAN
TEYTFILFCVFENARSSGVQLQALTDPPYFSCGQTFCPPDQDCVFINGTAQCGEACEHYT
ELNDNWLSEYNINGNSYCNGNYDSPKGWYRMFVGQTSAQIPETCVQDSRCGSYDHLKMTQ
PHPTQYNQTVTRYLCYTYGSNCYCYSSQSVTVKLCLGDFYVYKLQRLPGCYTAYCAVPNH
SFRAAGQDETSITLRWDKVNNSVSFVLLFNGTETNISAPAADDSVTYTVSSLTAATKYTF
TLFSVFENVTSSGISIDAVTAPPNVKTFSLLGTSFNSITLQWSKVTNATYVLQYNNERRI
IPASDGDGPVIYTVSSLSAGTSYAFTLYSVFENARGSNMQLQAVTDQYLSCGQTFCPPNQ
DCVIINGTAQCGEACGHYTELNDNWLSEYNINGNSYCNGNYYSPEGWYRMFVGQTSAQIP
ETCVQDSRCSSYRLRMTQPHPTQYNQTVTRSLCQSYYSSCCSNTSYIYNNIKVKLCYGDY
YVYKLQTLPRCNIAYCAVPNHSFRAAGQDETSITLRWDKVNNGVSFVLLFNGTETNISAP
AADDSVTYTVSSLTAATKYTFTLFSVFENITSSGISIDAVTAPPKVKTFTLLGTSFNSIT
LQWNMVNNASYVLEYNSGRRIIPAKDGDGPVTYTVSSLSAGSRYSFNLFSVFESARSSPL
YLEAFTDEQYVSCGQTSCPPGQDCVIINGTAQCGEACEHYTELNDNWLSEYYIYGNSYCY
GNYYSPKGWYRMFVGQTSAQIPETCVQESRCGSYDHLWMTQPHPTQYNQTVTRSLCYSYG
RDCYCYYTYSYSIRVKFCYGDFYVYKLQTLPGCYTGYCAVPNHSFRAAGQDETSITLRWD
KVNSSVSFVLLFNGTETNISAPAADDSVTYTVSSLTAATKYTFTLFSVFENITSSGISID
AVTAPPRVKTFILLGTSFNSITLQWNMVNNASYVLEYNSGRRIIPAKDGDGPVTYTVSSL
SAGSRYSFNLFSVFENARSSPLYLQAFTNEQYVSCGQTICPPGQDCVIINGTAQCGEACE
HYTELNDDWLSEYNIYGNSYCNGNYYSPEGWYRMFVGQTSAQIPETCVQDSRCSSYTNLQ
MSEPHPTQYNQTVTRSLCYSYGSNCYCYTSYAIKVKLCYEDFYVYKLQRLPGCSTGYCAV
PNHSFRAAGQDETSITLRWDKVNNSVSFVLLFNGTETNISAPAADDSVTYTVSSLTAATK
YTFTLFSVFENVTSSGISIDAVTAPPRVKTFTLLGTSFNSITLQWNMVNNASYVLEYNSG
RRIIPAKDGDGPVTYTVSSLSAGSRYSFNLFSVFENARSSPLYLEAFTDEQYVSCGQTIC
PPDQNCVIINGTAQCGEACEHYTELNDDWLSEYYIYGNSYCNGNYYSSEGWYRMFVGQTS
AQIPETCVQDSRCGSYTNLQMSEPHPTQYNQTVARSLCYSYGSSCCDYTYSYSIRVKFCY
GDFYVYKLQTLPGCSTGYCAVPNHSFRAAGQDETSITLRWDKVNNSVSFVLLFNGTETNI
SAPAADDSVTYTVSSLTAATKYTFTLFSVFENVRSSGISIDAVTAPLNAEIFTSIGINDT
SVTLQWSKPKYSGYLLHANYENRIIASSDADGPVIFTVSSLYPALKYTFTLYSVFENARS
SGVQLTVTTDHRYLPCGETFCAPDLNCFINNGSAQCVDPCEHYTVLNYNYSSMYGYCDGN
FVSGGWYSFFLGGTRARISDSCEDTCPTSYYLKLAETHPTEYNQSASLSLCYTYTDNCCN
YHYPFFIKAKLCYGNFYVYKLFDVYSCYNPYCTVPHQSFRVSGQSETSITLQWDDAKNNA
TFILEFNGTETNISATNGDGPMFYTVSSLSAATKYTFTLFSVVENVRSSGISLTVVTAPQ
NPKNLWQLTQNESSITLQWNRMNNVSFVLRLDGTETNIIASNGDGPETYTFSSLTAQTKY
TVTLFSVFENVRSSGQQLTAVTAPQNAKSFKASTQNETSITLQWDKVNNNVSFVLQFNGT
ETNIRAPAGDGVVNHTVSSLTARTKYTFTLFSVFENVRSSGVNITAATGPNYVVGLDMGF
RSFGAMTEAEVQSAIEELLQRYGISPSALSIKVKPVQP
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atggatctctggctgtttgtttgcatacttacaggagcactgttcagtgtttcctttgct
caaactcaccagttctactttgtgagcactgagctgaactggactgacgctcagagtttc
tgcagacgtgaatactctgatctggccaccatagagaacacagttgatgttgatgctgtt
ctgaacaccacattaaattacacaggcaaggtttggattggtctacacgatgacttggag
aacagctggaagtggtccttaaatgacagcagcttctgtgtggaaggagagcaaaccttc
aagaactggcagttaaaccaacctgacaatctgaatggacaacagtactgtgtcggatta
caaagtggaaactcatccagaggcaactgggatgaccgtgactgcaatgaagaacatgga
tttgtgtgctacaatggtacggtaaatggaattctttcatttgttgttggtgatgcaaca
ttaaactggagggaagcccagagatactgcagaaagaattttattgatttagccagcata
cagaatcaaacagaaaatgatgtcatcaacattctggcaaacggtagttttgtttggctt
ggtctgtatcgtcataaagtttggtctgatgggagaaactcagtgtttgaacattggact
gaaaatcaaccagaccacggagaccagaagtgcatcgctgcatctttcagtgactcagga
cgatggtcggatgaattttgttcccagagtttaccgtttatctgttatggatcagcttta
ccaaatgcaggtttcataccattcagccagaatgagaccagcatcactctgcagtggaat
aaagggaacagcagtgacagctttgttctccagtttaacggaacagagacaaacatcagt
gcatcagatggagatggaccaataaactacacagtttcatccctcactgctggaactaag
tacacgttcactctcttatcccgctcttccctcactagagtcaacatcaatgcagtaact
gctcctcaaaatgtagagtacttcaacgtacttgaaaaaagtgataccagcattactcta
cagtggagtgaggtcatcaatgccagctacattttgcagtttaacagcgagttgagagca
attcctgcatcaggagatggaccagtgacttacacagtggtgtctctctatgcatcaact
gaatacatatttactctttttactgtgtttgagaatgctacaagcactggagtacaacta
agagttgttactgattactggcgttattcctgtggacaggggtcttgtcctactgaccac
gtctgcatcaatatcaatggaacgtaccaatgtctggatggctgtaaccactacacagca
ctaagcgatgactggctttctgaatataacatcaatgggaactcgtactgtaatggaaat
tattacccatcaaattggtaccgcatgtttgtgggaaagagcagtgctcaaattcctgaa
acgtgtgttcgagacagcagatgtagctcttatcgtatttgggcaacaacacctcatcct
gtacactacaatgaaagtgcaaccctgactacatacactgcaagagatagtaactgctac
tacgacacttactattactctaacagagttatggcaagactttgctatggagactactat
gtgtacagacttccaagactacctggatgtgaatactcatattgtgcagttcctcctcat
ggtttcagatcatcaggacaaaatgaaaccagcatcactctgcggtgggacaaagtcaat
aacagtgtcagctttgttctcctgtttaatggaacagaaacaaacatcagtgctccagct
ggaagtgaaccagtaacttacacagtctcatctctgagtcctgcaactaaatacacattc
actctcttctctgtgtttgagaacgtcagaagcagtggaatcagcattgatggagtcact
gctcctcaacgcgtagaaactttcaacgtagtagaaaatactgacagaagcgtcactttg
caatggagtaaagtgaattttgccagctatgttctccagtataatcaaggatggaagaat
gtatcagcctcagatggagatggactgataacctatacagttccttctctcagagctaac
actgaatatacttttattcttttctgtgtgtttgaaaatgctagaagtagtggagttcaa
cttcaagctttaactgatccgccatatttttcatgtggacagaccttttgtcctccagac
caggactgtgttttcatcaatgggacggctcagtgtggtgaagcctgtgaacattacact
gaactgaatgataactggctttctgaatataacataaatggaaattcatactgtaatgga
aactacgactcccctaaaggctggtatcgtatgtttgtgggacaaaccagtgctcagatt
cctgaaacttgtgtacaagacagcagatgtggcagttatgatcatttgaagatgacacaa
cctcatccaactcaatacaatcaaactgtaacacgctatttgtgttatacctatggtagt
aactgctactgttactcatcacagtctgttacagtcaaactctgtttaggagacttctat
gtctacaaacttcaaagactcccaggatgctacactgcatattgtgcagttccaaatcac
agcttcagagcagctggtcaagatgaaaccagcatcactctgcggtgggacaaagtcaat
aacagtgtcagctttgttcttctgtttaatggaacagaaacaaacatcagtgctccagct
gcagatgactctgtaacttacacagtgtcatctctgactgctgcaactaaatacacattc
actctcttctctgtgtttgagaacgtcacaagcagtggaatcagcattgatgcagtcact
gctcctccaaacgtaaaaactttcagtttacttggaacaagtttcaacagtatcactctg
cagtggagtaaggtgaccaatgccacatatgtactgcagtacaataatgaacgaaggatc
attcctgcatcagatggagacggacccgtcatatacacagtctcatctctcagtgctgga
acttcatacgcattcactctgtactctgtgtttgagaatgccagaggcagtaatatgcag
cttcaggctgttactgatcaatatctttcatgtggacaaaccttttgtcctccaaaccag
gactgtgtcatcatcaatgggacggctcagtgtggtgaagcctgtggacattacactgaa
ctgaatgataactggctttcagaatataacataaatggaaactcctactgtaatggaaac
tactactcccctgaaggctggtatcgtatgtttgtgggacaaaccagcgctcagattcct
gaaacttgtgtccaagacagcagatgtagcagttatcgtttgcggatgacacaacctcat
ccaactcaatacaatcaaactgtaacacggtctttgtgtcaaagttattatagttcctgc
tgttccaacacatcatacatctataacaatattaaagtcaaactctgctatggagactac
tatgtgtacaagcttcaaacactaccacgatgcaacattgcatattgtgcagttccaaat
cacagcttcagagcagctggtcaagatgaaaccagcatcactctgcggtgggacaaagtc
aacaatggtgtcagctttgttctcctgtttaatggaacagaaacaaacatcagtgctcca
gctgcagatgactctgtaacttacacagtgtcatctctgactgctgcaactaaatacaca
ttcactctcttctctgtgtttgagaacatcacaagcagtggaatcagcattgatgcagtc
actgctcctccaaaagtaaaaacattcactttgcttggaacaagtttcaacagcatcact
ttgcagtggaatatggtgaacaatgccagttatgtcctagaatataatagtggacgaaga
atcattcctgcaaaagatggtgatggaccagtcacttacactgtctcatctctcagtgct
ggaagtagatactcattcaatctgttctctgtgtttgagagcgccagaagttctccatta
tatctagaagcttttactgatgagcaatatgtttcatgtggacagacctcttgtcctcca
ggccaggactgtgtcatcatcaatgggacggctcagtgtggtgaagcctgcgaacattac
actgaactgaatgataactggctttcagaatattacatttatggaaattcgtactgttat
ggaaactactactcccctaaaggctggtatcgtatgtttgtgggacaaaccagcgctcag
attcctgaaacttgtgtacaagaaagcagatgtggaagttacgatcatttgtggatgaca
caacctcatccaactcaatacaatcaaactgtaacacgctctttgtgttatagttatggt
agggactgctactgctactacacttactcatacagtattagagtcaaattctgctacgga
gacttctacgtctacaaacttcaaaccctaccaggatgctacactggatattgtgcagtt
ccaaatcacagcttcagagcagctggtcaagatgaaaccagcatcactctgcggtgggac
aaagtcaacagcagtgtcagctttgttctcctgtttaatggaacagaaacaaacatcagt
gctccagctgcagatgactctgtcacttatacagtgtcatctctgactgctgcaactaaa
tacacattcactctcttttctgtgtttgagaacatcacaagcagtggaatcagcattgat
gcagtcactgctcctccaagagtaaaaacattcattttgcttggaacaagtttcaacagc
atcactttgcagtggaatatggtgaacaatgccagttatgtcctagaatataatagtgga
cgaaggatcattcctgcaaaagatggtgatggaccagtcacttacactgtctcatctctc
agtgctggaagtagatactcattcaatctgttctctgtgtttgagaacgccagaagttct
ccattatatctacaagcttttactaatgagcaatatgtttcatgtggacagaccatttgt
cctccaggccaggactgtgtcatcatcaatgggacggctcagtgtggtgaagcctgtgaa
cattacactgaactgaatgatgactggctttcagaatataacatatatggaaattcatac
tgtaatggaaactactactcccctgaaggctggtatcgtatgtttgtgggacaaaccagc
gctcagattcctgaaacttgtgtccaagacagcagatgtagcagttataccaatttgcag
atgtcagaacctcatccaactcaatacaatcaaactgtaacacggtctttgtgttatagt
tatggtagtaactgctactgctacacctcctacgctattaaggtcaaactctgttatgaa
gatttctacgtctacaaacttcaaagactcccaggatgctccactggatattgtgcagtt
ccaaatcacagcttcagagcagctggtcaagatgaaaccagcatcactctgcggtgggac
aaagtcaataacagtgtcagctttgttctcctgtttaatggaacagaaacaaacatcagt
gctccagctgcagatgactctgtaacttacacagtgtcatctctgactgctgcaactaaa
tacacattcactctcttctctgtgtttgagaacgtcacaagcagtggaatcagcattgat
gcagtcactgctcctccaagagtaaaaacattcactttgcttggaacaagtttcaacagc
atcactttgcagtggaatatggtgaacaatgccagttatgtcctagaatataatagtgga
cgaaggatcattcctgcaaaagatggtgatggaccagtcacttacactgtctcatctctc
agtgctggaagtagatactcattcaatctgttctctgtgtttgagaacgccagaagttct
ccattatatctagaagcttttactgatgagcaatatgtttcatgtggacagaccatttgt
cctccagaccagaactgtgtcatcatcaatgggacggctcagtgtggtgaagcctgtgaa
cattacactgaactgaatgatgactggctttcagaatattacatatatggaaattcctac
tgtaatggaaactactactcctctgaaggctggtatcgtatgtttgtgggacaaaccagc
gctcagattcctgaaacttgtgtacaagacagcagatgtggcagttataccaatttgcag
atgtcagaacctcatccaactcaatacaatcaaactgtagcacgctctttgtgttatagt
tatggcagttcctgctgcgactacacttactcatacagtattagagtcaaattctgttac
ggagacttctacgtctacaaacttcaaaccctaccaggatgctccactggatattgtgca
gttcctaatcacagcttcagagcagctggtcaagatgaaaccagcatcactctgcggtgg
gacaaagtcaacaacagtgtcagctttgttctcctgtttaatggaacagaaacaaacatc
agtgctccagctgcagatgactctgtaacttacacagtgtcatctctgactgctgcaact
aaatacacattcactctcttctctgtgtttgagaacgtcagaagcagtggaatcagcatt
gatgcagtcactgctcctctaaatgcagaaatatttacttcaattggaataaatgacacc
agtgttactctgcagtggagtaagcccaaatatagtggttatctgctacatgctaattat
gaaaacaggatcattgcttcatcagatgctgacggaccagtaatctttacagtctcctct
ctttatcctgctcttaaatacacattcactctttactctgtatttgagaacgccagaagc
agtggagtacaactgacagtcactactgatcaccgatatcttccttgtggagaaacattt
tgtgctcctgacctgaactgcttcattaataacggaagtgctcaatgtgtcgacccctgt
gagcactacactgtactgaactacaactacagttcaatgtacggatactgcgatggaaat
tttgtctcaggaggatggtacagctttttcttgggaggaactagagctcgaatctctgac
tcatgtgaagatacttgtccaacatcttattacttgaaactggcagaaactcatcccaca
gagtacaatcaatctgcctcactgtctctgtgttatacctacactgataactgctgcaac
tatcactatccatttttcatcaaggccaaactctgttatggaaacttctacgtctacaaa
ctttttgatgtatattcatgttataatccctattgcacagttcctcatcagagttttcga
gtatcaggacaaagtgagaccagcatcactcttcagtgggatgatgcaaagaacaatgca
accttcatcttggagtttaatggaacagaaaccaacatcagtgcaacaaatggagatgga
ccaatgttttacacagtctcatccttgagtgctgcaactaaatacacattcactctcttc
tctgtagttgagaatgtcagaagcagtggaatcagcctcactgtagttactgctcctcaa
aatccaaaaaatctctggcaattaacacagaatgagagcagcatcactctgcagtggaac
agaatgaacaacgtcagttttgttcttcggcttgatggcacagaaaccaacatcattgcc
tcaaatggagatggaccagaaacttatacattctcatccctgacggctcaaactaaatac
acagttactctcttctctgtgtttgagaacgtcagaagcagcggacaacaactcacagct
gttactgctcctcaaaatgcaaaaagctttaaagcatcaacacagaatgagaccagcatc
actctgcagtgggataaagtgaacaacaatgtcagctttgttcttcagtttaacggcaca
gagacaaacatcagagctccagctggagatggagtagtcaaccacacagtctcatctctc
actgctcgaactaaatacacattcactctgttctctgtgtttgagaacgtcaggagctct
ggggtcaacatcactgcagcaacaggaccaaactatgtagtcggactggacatgggattt
aggtcttttggtgcgatgactgaagctgaagtgcagagtgccattgaagagcttctgcaa
agatatggaatttcaccatctgcattgtccattaaagttaaacctgtgcaaccgtga
DBGET
integrated database retrieval system
