Oryzias melastigma (Indian medaka): 112156181
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Entry
112156181 CDS
T07439
Symbol
hnrnpc
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112156181 (hnrnpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112156181 (hnrnpc)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112156181 (hnrnpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112156181
NCBI-ProteinID:
XP_024144147
Ensembl:
ENSOMEG00000020488
LinkDB
All DBs
Position
LG18:complement(21752516..21760153)
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AA seq
336 aa
AA seq
DB search
MNWSSSSSASSLMFSSNVTNKNDPRSLNSRVFVGNLNTLLVTKADVEAIFSKYGKIVGCS
VHKGYAFVQYLNERNARAAVGGEDGRVLAGQALDINLAGEPKPHRPKTMKRSAGDMFRCA
TQTRTSGLPAGKQNPSCFCSSSFACSSSLELDYDFQRDYYDRMYSYQPRVPAPPPPPPLS
RAIISSKRPRVSLSSGGSRRSKTAFTSSCRSSQRASHTVRSTDLQTVKRELTQIKHKLDF
LLESLERMEKEHNRKFEARSSKPEPGEVSPVHSSTSSKKEGSLKRDRESQELNDSEEDGD
LLDDEDEMKNRRREEDEEEEQEEGEDDGNSSNGDES
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtcctcctcctcctccgcctccagcctgatgttcagcagcaacgtgaccaac
aagaacgacccgcgctcgctcaactccagagtcttcgtggggaacctcaacaccctgctg
gtcaccaaggccgacgtggaggccatcttctccaagtacggcaagatcgtgggctgctcc
gtccacaagggctacgccttcgtccagtacctgaacgagaggaacgcccgggcggccgtg
ggcggcgaggacggccgcgtcttagcagggcaggcgctcgacatcaacctggcaggagag
ccgaagcctcacaggccgaagaccatgaagcgatctgcaggtgacatgttcaggtgcgcc
actcaaaccaggacttctggacttcctgctggaaaacagaatccatcatgtttttgttct
tcttcatttgcttgcagctcgtctctggagttggactacgacttccaaagagattattac
gacagaatgtactcctaccagccgcgagtccccgccccacctcctccgccaccactgtcc
cgcgccatcatctcctccaagcgtccccgggtcagtctgagcagcggagggagtcggcga
agcaagacggcgttcacctcctcctgcaggagcagccagagggcttcacacacagtgagg
agcaccgacctccagacggtgaagagggagctgacgcagatcaaacacaagctggacttc
ctgctggagagcctggagcgcatggagaaggagcacaatcggaagtttgaggccaggagc
tctaaaccggagcccggggaggtgtcccccgttcactcctccacctccagcaagaaggag
ggcagcctgaagagggacagggagagccaggagctgaacgactctgaggaggacggagat
ctgctggacgatgaagacgagatgaagaacagacgcagagaggaggacgaggaagaggag
caggaggaaggagaggatgacggcaacagctccaacggagacgagtcctga
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