Oryzias melastigma (Indian medaka): 112156224
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Entry
112156224 CDS
T07439
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112156224 (sox19b)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112156224 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112156224
NCBI-ProteinID:
XP_024144209
Ensembl:
ENSOMEG00000003278
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All DBs
Position
LG18:complement(20995509..20999645)
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AA seq
297 aa
AA seq
DB search
MYSLMEHELKPAGQPHAQHAAPGMTPVTGGMNSHPKTACAPGNDPMDKVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYKP
RRKTKPLLKKDAPGAKYPLSAGNLLAAAAQGQGASPRMDSYGWGPAGGYSGMQGDALGYS
QPLHRYELSALQYPPAMTAAQTYMGGANSYSPMTYSSSPQQPSPVMSMMKAEPVSHSPSA
GTPTHHRGALQGDLRDMISMYIPASGGDASDAAAAQQRGYAGVQQHYLTGTVPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcctgatggagcacgagctgaaaccggccggccagcctcacgcccagcacgcg
gccccggggatgacccccgtgaccggcggcatgaactctcacccgaaaaccgcctgcgcg
cccggaaacgaccccatggataaagtgaagagacccatgaacgccttcatggtgtggtct
cgaggtcagaggagaaaaatggcccaggagaaccccaagatgcacaactccgagatcagc
aagcggctgggcgcggagtggaagctcctgagcgacgcggagaagcggcccttcatcgac
gaggccaagcggctgcgcgccgtgcacatgaaggagtacccggactacaagtacaagccg
cgccgcaagaccaagccgctgctgaagaaggacgcgccgggggccaagtacccgctgtcc
gcggggaacctgctggccgccgccgcgcagggccagggcgcgagcccgcgcatggacagc
tacggctggggccccgcgggcggatacagcggcatgcagggcgacgcgctgggctactcc
cagccgctgcaccggtacgagctgtccgccctgcagtacccgccggccatgacggccgcg
cagacttacatgggcggggccaactcctacagtcccatgacgtacagcagcagccctcag
cagcccagcccggtcatgtccatgatgaaggcggagccggtgtctcactcgccctcagcg
gggacgcccacccaccaccgaggagcactacagggcgacctgagggacatgatcagcatg
tacatccctgcaagcggaggggatgcctcggacgcggcggcggcccagcagcggggatac
gctggtgtccagcagcactacctcaccggaaccgtcccgctcacgcacatctag
DBGET
integrated database retrieval system
