Oryzias melastigma (Indian medaka): 112156387
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Entry
112156387 CDS
T07439
Symbol
si:ch211-168d1.3
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112156387 (si:ch211-168d1.3)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112156387 (si:ch211-168d1.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
112156387
NCBI-ProteinID:
XP_024144416
Ensembl:
ENSOMEG00000016929
UniProt:
A0A3B3CBQ7
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Position
LG18:complement(17942705..17982884)
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AA seq
785 aa
AA seq
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MQDGRCSQRGSQRAFSILDRLLLTHPVWLQLSLNRDSALYILLREPVGTFLVRKCSSSQR
KVLCLRVTAERSASSVQECFISEEDSTFALESSALSFPDLCRLVAFYCISRDTLPFPLQL
PEAIAKATTHRQLEAISHMGQDFWSSPSASEIQNGPAGLVASTSGSQAQTGGIPEQCSLL
NRGTQGKVCFINPLFLQLEVILQPQPTNHSASNKRNRFKRSMRLRLSETSMNLSLEGVGS
YSPSPSVEQPGGSEGLHKANANPQRRVHAGAGVLRRTPAVSPGSAEEEDMMSVYVPQTST
TAQEPSKSQQEPGIEVSVQALENRPVPSLAELDSSSSFSSMDEDNDSDSDQGSMAQTQAY
SYQRPPLVRSRGRGGMHRMSEAFVCFFAPDKRVSRLVEELSRDRRSVFGSMVQDFLLEQK
EMLKSLSSTSSSPAVTSVQLLQGLRLFLSQAKCCLLDSGELEPPIETLVPENEKDLALER
AMFSCVLRPLRSKLDKALTALHDHDGSLQRLTQNLVHLKGDATSERLGVRTGVPDSREVE
RVKRKMVLMQRTHSPIDKVLLLLQMCKCVHKAMGSLHGQEVSWEDFLPSLSYVLVECNRP
HILIEVEYMMELLEPSWLGGEGGYYLTSVYASLCLIQGLEPDKPFSGCLPPQLQEALKEW
SSRRSQEAQRQKENQQNQRCVRILFQDGERSAVRTLQWRAGETCQALAQLCASTFGVSDP
QQYTLYWRSGGEMRALPPQAQPQDLASHSEGGPSLSYLRTDHDFSKMRRLTRGGAVDLSE
SVCEE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggagatgttctcagcgtggctctcagcgggccttcagcatcctggaccgt
ctgctgctcactcatcccgtgtggctgcagctgtccctgaaccgagactccgccctctac
atactcctcagagaacctgttgggacttttctagtgcgcaaatgcagctccagccagagg
aaagtgctgtgtttgagagtgacagccgagagaagtgcctcctccgttcaggagtgcttc
atcagcgaggaggactccacatttgctttggaaagctcggctctcagcttccctgatttg
tgtcgcctggtggccttctactgcatcagcagggacacgttaccctttcctctgcagcta
ccagaggctattgctaaagccacaacacacaggcagctggaagccatctcacacatggga
caagacttctggagttcgccaagtgcttcagagattcagaacgggccggcaggactcgtt
gcatcaaccagcgggagccaagctcagacgggggggattccagagcagtgttctctgctg
aatcgaggcacacaaggcaaagtctgcttcatcaatccactctttcttcagctggaggtt
attttgcagccacaacccacaaaccacagtgcctctaataaacggaatcgcttcaagcgc
agcatgaggctccggctctctgagacctccatgaatttatctcttgagggagtcggctcc
tactcaccttcgccgtctgtggagcaacccggagggtctgaggggctgcacaaggccaat
gctaacccgcagaggagagttcatgcaggtgctggggtcttaagaagaacccctgctgtg
tcacctgggtcagcagaggaagaggacatgatgtctgtctatgtgccacaaacatctacc
acagctcaagaaccatcaaagtctcagcaggagccaggtattgaagtatcagttcaagct
ttagagaatcgccccgttccatcactggccgagcttgacagcagcagctctttcagcagc
atggatgaagacaatgactcagactcggatcaaggaagcatggcccaaacccaagcgtat
agctaccaacgtccgcctctcgtccgctctcgaggccgtggtggcatgcaccgaatgagc
gaggcattcgtgtgcttcttcgccccagacaagagggtgtcccgcctggtggaggagctg
tccagagacaggcgctctgtgtttggaagtatggttcaggatttccttctagagcagaag
gagatgctcaaatcgctgtcctccacttcttcgtctccagccgtcacgtccgtgcagctt
ctgcagggtctgcgcctctttctgtcacaggccaagtgctgcttgctggacagtggagag
ctggagcctcccatcgaaaccttagtgccagagaacgagaaagatctggcgttggagagg
gccatgttctcttgtgtgctccggcctctgagatccaagctcgacaaagcattgactgct
ttgcacgaccatgatggttctcttcagcgcctcacccaaaacctggtgcacctgaagggg
gatgcaaccagtgagcgacttggagtgcggacgggggtcccagacagtcgggaagtggag
agggtgaaacgcaaaatggtcttgatgcagcggacacattcacccatcgacaaggtgctg
ctgctgctgcaaatgtgcaagtgtgtccacaaggccatgggctccctacatggacaggaa
gtgagctgggaagacttcctgccatctttatcctatgtgctcgtggaatgtaacaggcct
cacatcctgatagaagtggagtacatgatggagctgctggagccgtcctggctgggtgga
gaaggtgggtactacctgaccagcgtgtatgccagcctctgcctgatccagggcttggag
ccggacaagcctttctccggctgcctgccgccacagctccaggaggcgctgaaggagtgg
agcagcaggcggagccaggaggcccagagacaaaaggagaatcagcaaaaccaaaggtgc
gttcggatactgttccaggacggggagcggagcgccgtgcggacgttgcagtggagagcc
ggggagacctgccaggcgctggcgcagctctgtgcctccacgttcggagtgtccgaccca
cagcaatacaccctgtactggcgcagcggaggggagatgagggccctgccgcctcaggcc
cagccccaggacctggccagccacagcgagggggggccctcgctctcctacctgaggacc
gatcacgacttcagcaagatgcggcggctcaccagaggtggcgctgtggacctgagcgag
tcggtgtgtgaggagtga
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